; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035322 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035322
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTobamovirus multiplication 1 homolog
Genome locationscaffold7:24004130..24015167
RNA-Seq ExpressionSpg035322
SyntenySpg035322
Gene Ontology termsGO:0046786 - viral replication complex formation and maintenance (biological process)
GO:0009705 - plant-type vacuole membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009457 - THH1/TOM1/TOM3 domain
IPR040226 - THH1/TOM1/TOM3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599855.1 Tobamovirus multiplication protein 3, partial [Cucurbita argyrosperma subsp. sororia]6.6e-5385.19Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

KAG6600798.1 Tobamovirus multiplication protein 3, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5384.44Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA+LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

XP_022942344.1 protein TOM THREE HOMOLOG 1 [Cucurbita moschata]5.0e-5384.44Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA+LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

XP_022977192.1 protein TOM THREE HOMOLOG 1-like isoform X1 [Cucurbita maxima]6.6e-5385.19Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

XP_023539850.1 tobamovirus multiplication protein 3-like [Cucurbita pepo subsp. pepo]6.6e-5385.19Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

TrEMBL top hitse value%identityAlignment
A0A3Q0EQ46 protein TOM THREE HOMOLOG 1 isoform X27.1e-5390.6Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFI
        I LWLILWW P+ VL +LSKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQEMCFNAF++AADLDVLDHP+LNFIYYLLVEILPSSLVLFI
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFI

Query:  LRKLPPKRGITQYHPIR
        LRKLPPKRGITQYHPIR
Subjt:  LRKLPPKRGITQYHPIR

A0A6J1FNT1 tobamovirus multiplication protein 3-like9.3e-5384.44Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPK+GITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6J1FR16 protein TOM THREE HOMOLOG 12.4e-5384.44Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA+LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6J1IHS8 protein TOM THREE HOMOLOG 1-like isoform X13.2e-5385.19Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF+QAADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6J1JA69 protein TOM THREE HOMOLOG 1-like7.1e-5383.7Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        IVLWLILWWNPVHVLA+LSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAF++AADLDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

SwissProt top hitse value%identityAlignment
Q402F3 Tobamovirus multiplication protein 32.6e-5278.52Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        I+LWLI+WW PV VL +LSKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQE                  MCFNAFN+AADLDVLDHP+LN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
         IYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Q402F4 Tobamovirus multiplication protein 14.2e-3460.61Show/hide
Query:  LWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEM--------------CF----NAFNQAADLDVLDHPVLNFI
        +W+ LW N    +  + K+F A VS  AALGFL+YGGRLFLML+RFP+ESKGRRKKL E+              CF    +AF+  A LDVLDHPVLN I
Subjt:  LWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEM--------------CF----NAFNQAADLDVLDHPVLNFI

Query:  YYLLVEILPSSLVLFILRKLPPKRGITQYHPI
        YYLLVEILPS+LVL+ILRKLPPKR   QYHPI
Subjt:  YYLLVEILPSSLVLFILRKLPPKRGITQYHPI

Q948R8 Protein TOM THREE HOMOLOG 13.2e-5074.81Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        I LWL+LWW PVH++ ++SKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQE                  MCF+AF+ AADLDVLDHP+LN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Q9FEG2 Tobamovirus multiplication protein 15.1e-3255.56Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEM---------CF---------NAFNQAADLDVLDHPVLN
        I +W  +W +    + ++ K+F A VS  AALGFL+YGGRLF ML+RFP+ESKGRRKKL E+         CF         +AF++   LDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEM---------CF---------NAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
         IYY++VE+LPS+LVLFILRKLPPKR   QYHPI+
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Q9ZUM2 Tobamovirus multiplication protein 33.5e-4974.81Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        I LWL+LWW PV V+ +LSKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQE                  MCF AF++ A+LDVLDHP+LN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Arabidopsis top hitse value%identityAlignment
AT1G14530.1 Protein of unknown function (DUF1084)2.3e-5174.81Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        I LWL+LWW PVH++ ++SKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQE                  MCF+AF+ AADLDVLDHP+LN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

AT1G14530.2 Protein of unknown function (DUF1084)2.3e-5174.81Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        I LWL+LWW PVH++ ++SKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQE                  MCF+AF+ AADLDVLDHP+LN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

AT2G02180.1 tobamovirus multiplication protein 32.5e-5074.81Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN
        I LWL+LWW PV V+ +LSKMFFA VSLFAALGFL+YGGRLFLMLQRFPVESKGRRKKLQE                  MCF AF++ A+LDVLDHP+LN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFNAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        FIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

AT4G21790.1 tobamovirus multiplication 13.6e-3355.56Show/hide
Query:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEM---------CF---------NAFNQAADLDVLDHPVLN
        I +W  +W +    + ++ K+F A VS  AALGFL+YGGRLF ML+RFP+ESKGRRKKL E+         CF         +AF++   LDVLDHPVLN
Subjt:  IVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEM---------CF---------NAFNQAADLDVLDHPVLN

Query:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
         IYY++VE+LPS+LVLFILRKLPPKR   QYHPI+
Subjt:  FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGTGAAGAAAGGCATAAGAGCTCAGGAGTAATGTATGAAGTCATACTTGACAAGGAGATCGAGAGTTGTTGTTGTGCACGGGCATGCTACACTCACATTGACCA
TAAGCCGTTGCTAGCCTCTTGTGTAGCCCTTGCCCCTCTACTTTCCCTTTATTCTCCCTGTTATGAAAGGTTAGTATTTCCAAGAAGGTCAAATTCTTCGAGTGACAAGT
CTGAGTCTGGCATAGGGGTGCAGTACTATGAACCAAATTCTGAGGCATTCCTTATTCTTCCTGGGGACACAGTGGGAAAGTTGTTTGATGATAGAGGGGATTCAGCTTCT
TCCTCCCTTCAAGGAGAAGGTATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTACTGGCTGTCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTCTGTTTGC
TGCCCTCGGGTTTCTTATTTATGGGGGAAGATTGTTTTTGATGTTACAGCGCTTTCCCGTGGAATCCAAAGGAAGACGCAAGAAGTTGCAAGAGATGTGCTTTAATGCTT
TTAATCAAGCTGCAGACCTCGACGTTTTGGATCATCCAGTTCTAAATTTTATATACTACCTGTTGGTTGAGATCTTACCTTCTTCCCTGGTTCTCTTCATTCTGAGGAAG
CTGCCTCCGAAACGAGGAATCACGCAGTACCATCCTATCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGTGAAGAAAGGCATAAGAGCTCAGGAGTAATGTATGAAGTCATACTTGACAAGGAGATCGAGAGTTGTTGTTGTGCACGGGCATGCTACACTCACATTGACCA
TAAGCCGTTGCTAGCCTCTTGTGTAGCCCTTGCCCCTCTACTTTCCCTTTATTCTCCCTGTTATGAAAGGTTAGTATTTCCAAGAAGGTCAAATTCTTCGAGTGACAAGT
CTGAGTCTGGCATAGGGGTGCAGTACTATGAACCAAATTCTGAGGCATTCCTTATTCTTCCTGGGGACACAGTGGGAAAGTTGTTTGATGATAGAGGGGATTCAGCTTCT
TCCTCCCTTCAAGGAGAAGGTATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTACTGGCTGTCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTCTGTTTGC
TGCCCTCGGGTTTCTTATTTATGGGGGAAGATTGTTTTTGATGTTACAGCGCTTTCCCGTGGAATCCAAAGGAAGACGCAAGAAGTTGCAAGAGATGTGCTTTAATGCTT
TTAATCAAGCTGCAGACCTCGACGTTTTGGATCATCCAGTTCTAAATTTTATATACTACCTGTTGGTTGAGATCTTACCTTCTTCCCTGGTTCTCTTCATTCTGAGGAAG
CTGCCTCCGAAACGAGGAATCACGCAGTACCATCCTATCCGCTGA
Protein sequenceShow/hide protein sequence
MVCEERHKSSGVMYEVILDKEIESCCCARACYTHIDHKPLLASCVALAPLLSLYSPCYERLVFPRRSNSSSDKSESGIGVQYYEPNSEAFLILPGDTVGKLFDDRGDSAS
SSLQGEGIVLWLILWWNPVHVLAVLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRK
LPPKRGITQYHPIR