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Spg035326 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035326
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRAB6-interacting golgin
Genome locationscaffold7:22037039..22039511
RNA-Seq ExpressionSpg035326
SyntenySpg035326
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]5.0e-1677.61Show/hide
Query:  MQRMKNSGMISSHVN--AIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSGMISS+VN   IGSP++EDQ+ E+SRSA ALFRAKEE+IERKKMEMR+KV A LGRAEEA
Subjt:  MQRMKNSGMISSHVN--AIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]2.9e-1678.79Show/hide
Query:  MQRMKNSGMISSHV-NAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSGMISS+V N IGSP++EDQ+ E+SRSA ALFRAKEE+IERKKMEMR+KV A LGRAEEA
Subjt:  MQRMKNSGMISSHV-NAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]1.4e-1886.15Show/hide
Query:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR++NSGMI SHVNAIGSP++EDQD ELSRSAFALFRAKEE+IERKKMEMRDKV A LGRAEEA
Subjt:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

XP_022731733.1 uncharacterized protein LOC111286170 [Durio zibethinus]5.7e-1264.62Show/hide
Query:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSG+ISS+    GSP+++D++ E+ +SA ALFRAKEE+IERKKME+RDKV A++GR EEA
Subjt:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]1.0e-1680.3Show/hide
Query:  MQRMKNSG-MISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSG MISS+VNAIGSPV+EDQ+ E+SRSA A+FRAKEE+IERKKMEMR+KV A LGRAEEA
Subjt:  MQRMKNSG-MISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin2.4e-1677.61Show/hide
Query:  MQRMKNSGMISSHVN--AIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSGMISS+VN   IGSP++EDQ+ E+SRSA ALFRAKEE+IERKKMEMR+KV A LGRAEEA
Subjt:  MQRMKNSGMISSHVN--AIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

A0A1S3CFV6 RAB6-interacting golgin1.4e-1678.79Show/hide
Query:  MQRMKNSGMISSHV-NAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSGMISS+V N IGSP++EDQ+ E+SRSA ALFRAKEE+IERKKMEMR+KV A LGRAEEA
Subjt:  MQRMKNSGMISSHV-NAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

A0A5D3CH78 RAB6-interacting golgin1.4e-1678.79Show/hide
Query:  MQRMKNSGMISSHV-NAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSGMISS+V N IGSP++EDQ+ E+SRSA ALFRAKEE+IERKKMEMR+KV A LGRAEEA
Subjt:  MQRMKNSGMISSHV-NAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

A0A6J1CNF1 RAB6-interacting golgin6.8e-1986.15Show/hide
Query:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR++NSGMI SHVNAIGSP++EDQD ELSRSAFALFRAKEE+IERKKMEMRDKV A LGRAEEA
Subjt:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

A0A6P5XU15 RAB6-interacting golgin2.8e-1264.62Show/hide
Query:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        MQR+KNSG+ISS+    GSP+++D++ E+ +SA ALFRAKEE+IERKKME+RDKV A++GR EEA
Subjt:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)3.0e-1155.38Show/hide
Query:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA
        +QR+K+SG IS +    GSP+ ++++ ELS+SAFALF+AKE++IER+KME++D+V   LG AEEA
Subjt:  MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEA

AT3G09980.1 Family of unknown function (DUF662)4.5e-0762.5Show/hide
Query:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE
        +D E+SR+A + FRAKEE+IE+KKME+R++V A LGR EE
Subjt:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE

AT3G52920.1 Family of unknown function (DUF662)2.2e-0657.5Show/hide
Query:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE
        +D E++RSA + FRAKE++IE++KME+R++V A LGR EE
Subjt:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE

AT3G52920.2 Family of unknown function (DUF662)2.2e-0657.5Show/hide
Query:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE
        +D E++RSA + FRAKE++IE++KME+R++V A LGR EE
Subjt:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE

AT5G03660.1 Family of unknown function (DUF662)1.1e-0557.5Show/hide
Query:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE
        +D ELS  A + F+AKEE+IE+KKME+R++V A LGR E+
Subjt:  QDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGAATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCAGTGAGGGAGGATCAAGACGTGGAGCTTTCGAGATCGGCATTCGCATTGTT
CCGAGCCAAGGAAGAGAAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGTGGCCCACCTTGGACGAGCTGAAGAAGCGATGGTTGTTCTGAGGTTTCACACCG
GTGAGAGGAACATCCAGTCACCATCGGTGAGAAGTGGGAAAACGCTTAGAGAGAGAGAACGACGCAACAAGGGAAAGAGGGCTTCTTCGAAGAGAGATAAATTTTCAGCG
CACTTCTTGAGGCGTCCGACATTGTTGTTCATTAGAGGAGCACTGGTACTCAATGACATAGAGGTTCCACTGGTGGCTCGTAAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGAATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCAGTGAGGGAGGATCAAGACGTGGAGCTTTCGAGATCGGCATTCGCATTGTT
CCGAGCCAAGGAAGAGAAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGTGGCCCACCTTGGACGAGCTGAAGAAGCGATGGTTGTTCTGAGGTTTCACACCG
GTGAGAGGAACATCCAGTCACCATCGGTGAGAAGTGGGAAAACGCTTAGAGAGAGAGAACGACGCAACAAGGGAAAGAGGGCTTCTTCGAAGAGAGATAAATTTTCAGCG
CACTTCTTGAGGCGTCCGACATTGTTGTTCATTAGAGGAGCACTGGTACTCAATGACATAGAGGTTCCACTGGTGGCTCGTAAAGGGTAA
Protein sequenceShow/hide protein sequence
MQRMKNSGMISSHVNAIGSPVREDQDVELSRSAFALFRAKEEKIERKKMEMRDKVVAHLGRAEEAMVVLRFHTGERNIQSPSVRSGKTLRERERRNKGKRASSKRDKFSA
HFLRRPTLLFIRGALVLNDIEVPLVARKG