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Spg035343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold7:21991509..21994195
RNA-Seq ExpressionSpg035343
SyntenySpg035343
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-0930.97Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VL++C + +  ME++  MY +P+ PP   R R +  E ++    DEV+HNVE++ P TQ Q+     +P++++PT G+ Y    +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDHHDVQGADEDNPKEDQTN
        Y++  GPSS++ + GPS+SY H  + +  E +E +      + +D    +++  N
Subjt:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDHHDVQGADEDNPKEDQTN

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-1138.97Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VLN+C + +  ME++  MY + + PPP  R R R  E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y+ + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL
        Y+AG  PSS + + GPS+ Y H  +  G  EH   L
Subjt:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]7.9e-1037.68Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VL++C + E  ME++  MY +P+ P P  R R R  E ++    DEV+HNVE+VPP T+TQ      + + ++PT G +Y  + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEAG---PSSTHEAGPSSSYAHREQPEGREEHEVILDH
        Y+AG    SS  + GPS+SY H  +  G  EH   L H
Subjt:  YEAG---PSSTHEAGPSSSYAHREQPEGREEHEVILDH

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-1138.97Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VLN+C + +  ME++  MY + + PPP  R R R  E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y+ + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL
        Y+AG  PSS + + GPS+ Y H  +  G  EH   L
Subjt:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.1e-1038.41Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPIP-PY
        ++RD+  D   VL++C + E  ME++  +Y +P+ PPP  R R R  E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y  + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPIP-PY

Query:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDH
        Y+A  GP S++ + GPS+SY +     G  EH   L H
Subjt:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-0930.97Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VL++C + +  ME++  MY +P+ PP   R R +  E ++    DEV+HNVE++ P TQ Q+     +P++++PT G+ Y    +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDHHDVQGADEDNPKEDQTN
        Y++  GPSS++ + GPS+SY H  + +  E +E +      + +D    +++  N
Subjt:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDHHDVQGADEDNPKEDQTN

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.9e-1238.97Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VLN+C + +  ME++  MY + + PPP  R R R  E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y+ + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL
        Y+AG  PSS + + GPS+ Y H  +  G  EH   L
Subjt:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X23.8e-1037.68Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VL++C + E  ME++  MY +P+ P P  R R R  E ++    DEV+HNVE+VPP T+TQ      + + ++PT G +Y  + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEAG---PSSTHEAGPSSSYAHREQPEGREEHEVILDH
        Y+AG    SS  + GPS+SY H  +  G  EH   L H
Subjt:  YEAG---PSSTHEAGPSSSYAHREQPEGREEHEVILDH

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.9e-1238.97Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY
        ++RD+++D   VLN+C + +  ME++  MY + + PPP  R R R  E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y+ + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPI-PPY

Query:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL
        Y+AG  PSS + + GPS+ Y H  +  G  EH   L
Subjt:  YEAG--PSSTH-EAGPSSSYAHREQPEGREEHEVIL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.0e-1038.41Show/hide
Query:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPIP-PY
        ++RD+  D   VL++C + E  ME++  +Y +P+ PPP  R R R  E ++    DEV+HNVE+VPP TQTQ      +P+ ++PT G  Y  + +   Y
Subjt:  QIRDISED-LDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPSTPLVLIPTPGMQYFQTPIP-PY

Query:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDH
        Y+A  GP S++ + GPS+SY +     G  EH   L H
Subjt:  YEA--GPSSTH-EAGPSSSYAHREQPEGREEHEVILDH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATGGAGACACAACTCCAGAATATATGGGGTGGTATCATAATTTTACTAGACGCTTCATCACTTGAGAGGGGGCCTCATATGGTCACGTGGTCATGTTTTCAACA
AATTCGTGATATAAGTGAAGATCTAGACGTTCTTAATTTGTGTACTAGTGGTGAGGCCAGTATGGAACAACTTCAGTATATGTACCGCATACCTATGCCACCTCCCCCAG
GTCTTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAGACACAAGATGGTGGT
ACTCCTTCCACTCCACTTGTTTTGATCCCAACTCCTGGTATGCAGTATTTTCAGACTCCGATTCCACCATACTATGAGGCTGGTCCATCATCAACACATGAGGCAGGTCC
CTCATCGTCATATGCTCATAGAGAGCAACCAGAAGGACGAGAGGAACATGAGGTAATTTTGGACCACCATGATGTGCAAGGAGCTGACGAGGACAACCCAAAGGAAGACC
AGACCAACGGGCCGGGCCAACTTGGCCCGACCCATATGGTCGGCCCGCGCACGTTTGCCTCCGCTTGGTCCCTGTTGCCTCTAGCCGCCCCCGGTTCCGCCTGGCCACGC
CTTCCCCCCTCACAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGATGAGTTCTCCCTGTCCAAATTTGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCT
TGTTAAATCTGCACATCGGTCGTTCAATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATGGAGACACAACTCCAGAATATATGGGGTGGTATCATAATTTTACTAGACGCTTCATCACTTGAGAGGGGGCCTCATATGGTCACGTGGTCATGTTTTCAACA
AATTCGTGATATAAGTGAAGATCTAGACGTTCTTAATTTGTGTACTAGTGGTGAGGCCAGTATGGAACAACTTCAGTATATGTACCGCATACCTATGCCACCTCCCCCAG
GTCTTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAGACACAAGATGGTGGT
ACTCCTTCCACTCCACTTGTTTTGATCCCAACTCCTGGTATGCAGTATTTTCAGACTCCGATTCCACCATACTATGAGGCTGGTCCATCATCAACACATGAGGCAGGTCC
CTCATCGTCATATGCTCATAGAGAGCAACCAGAAGGACGAGAGGAACATGAGGTAATTTTGGACCACCATGATGTGCAAGGAGCTGACGAGGACAACCCAAAGGAAGACC
AGACCAACGGGCCGGGCCAACTTGGCCCGACCCATATGGTCGGCCCGCGCACGTTTGCCTCCGCTTGGTCCCTGTTGCCTCTAGCCGCCCCCGGTTCCGCCTGGCCACGC
CTTCCCCCCTCACAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGATGAGTTCTCCCTGTCCAAATTTGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCT
TGTTAAATCTGCACATCGGTCGTTCAATGAGTAA
Protein sequenceShow/hide protein sequence
MLMETQLQNIWGGIIILLDASSLERGPHMVTWSCFQQIRDISEDLDVLNLCTSGEASMEQLQYMYRIPMPPPPGLRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGG
TPSTPLVLIPTPGMQYFQTPIPPYYEAGPSSTHEAGPSSSYAHREQPEGREEHEVILDHHDVQGADEDNPKEDQTNGPGQLGPTHMVGPRTFASAWSLLPLAAPGSAWPR
LPPSQTNLPLVAREGQMSSPCPNLTINSWRRLWGRKLVKSAHRSFNE