; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035362 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035362
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold7:24599757..24613098
RNA-Seq ExpressionSpg035362
SyntenySpg035362
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]3.1e-1467.53Show/hide
Query:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        LFGLSY EG KRP+G+R SLQTGELDKT   +          L TLSVLRDND VV+IELPV DTLPTSAES RS+S
Subjt:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.1e-1568.83Show/hide
Query:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        LFGL Y EG KRPRG+R+SLQTGELDKT              L TLSVLRDNDAVV+IELPV DTLPTSAESS S+S
Subjt:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

KAA0053207.1 hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa]7.1e-1160.81Show/hide
Query:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        +S +E ++ PRG+R SLQTGELDKT             PL TLSVLRDNDAVV+IELP  + LPTSAESSRS+S
Subjt:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

KAA0056731.1 hypothetical protein E6C27_scaffold29G00280 [Cucumis melo var. makuwa]6.4e-1260Show/hide
Query:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSSK
        +S +E ++ PRG+RSSLQTGELDKT             PL  LSVLRDNDA+V+IELPV DTLPTSAE+S+S+S+
Subjt:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSSK

TYK01208.1 uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa]7.8e-1060.27Show/hide
Query:  SYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        S +E ++ PRG+RSSLQTG+LDKT             PL  LSVLRDND VV+IELPV DT PTSAESS S+S
Subjt:  SYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein3.9e-1568.83Show/hide
Query:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        LFGL Y EG KRPRG+R+SLQTGELDKT              L TLSVLRDNDAVV+IELPV DTLPTSAESS S+S
Subjt:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

A0A5A7UFD2 Uncharacterized protein3.4e-1160.81Show/hide
Query:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        +S +E ++ PRG+R SLQTGELDKT             PL TLSVLRDNDAVV+IELP  + LPTSAESSRS+S
Subjt:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

A0A5D3BQ75 Uncharacterized protein3.8e-1060.27Show/hide
Query:  SYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        S +E ++ PRG+RSSLQTG+LDKT             PL  LSVLRDND VV+IELPV DT PTSAESS S+S
Subjt:  SYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

A0A5D3DCA4 Uncharacterized protein3.1e-1260Show/hide
Query:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSSK
        +S +E ++ PRG+RSSLQTGELDKT             PL  LSVLRDNDA+V+IELPV DTLPTSAE+S+S+S+
Subjt:  LSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSSK

A0A5D3DIM8 Uncharacterized protein1.5e-1467.53Show/hide
Query:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS
        LFGLSY EG KRP+G+R SLQTGELDKT   +          L TLSVLRDND VV+IELPV DTLPTSAES RS+S
Subjt:  LFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVKIELPVLDTLPTSAESSRSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTCTATTTTAGGCGTGTTATCCCTAATCTTGTAGCACTTTGCATAAAAACGCAACAACGAACCTTGATCTTTGCTGGAAATTCTTCAGGAATTGTGAACACCAC
CACTATGGCTACACCGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACATAGAAGGAATCA
AGAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGT
GTACTCCGTGACAACGATGCTGTCGTAAAGATCGAGCTCCCGGTGCTTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAAATATATTGCTGAGGGACT
TGAGGGAGCAAATTCTGTGCTGCAGCAAAGCAAGGAGCAAAACTGCCACGTCACAGCTCGTGTGAGTTTGGTGCATGAACGATCCGCCTGGGGTAAGAAAAAGAAAACAC
CAAAAGAGAAAGAAGCTAAAAGAAGGAAGAGACAACAGAAGGCTGAGGATCAAGAAATCATACAGAATGTTGTGGAGGATATTGCTGCCGAGGTAGTTGAAGAAGGCAAT
CCGAAGGAACTTGAAGGACAAAACCCAAAGCAGACTGACCCAACAGTTGCGGATACGGAGGAAGTTCAAGAAGAGAACACAGAGGAAGTTCAAGAAAAACAGACTGAGGA
TGCGCAAGAGGGACAAACAGAGGATGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTCTATTTTAGGCGTGTTATCCCTAATCTTGTAGCACTTTGCATAAAAACGCAACAACGAACCTTGATCTTTGCTGGAAATTCTTCAGGAATTGTGAACACCAC
CACTATGGCTACACCGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACATAGAAGGAATCA
AGAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGT
GTACTCCGTGACAACGATGCTGTCGTAAAGATCGAGCTCCCGGTGCTTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAAATATATTGCTGAGGGACT
TGAGGGAGCAAATTCTGTGCTGCAGCAAAGCAAGGAGCAAAACTGCCACGTCACAGCTCGTGTGAGTTTGGTGCATGAACGATCCGCCTGGGGTAAGAAAAAGAAAACAC
CAAAAGAGAAAGAAGCTAAAAGAAGGAAGAGACAACAGAAGGCTGAGGATCAAGAAATCATACAGAATGTTGTGGAGGATATTGCTGCCGAGGTAGTTGAAGAAGGCAAT
CCGAAGGAACTTGAAGGACAAAACCCAAAGCAGACTGACCCAACAGTTGCGGATACGGAGGAAGTTCAAGAAGAGAACACAGAGGAAGTTCAAGAAAAACAGACTGAGGA
TGCGCAAGAGGGACAAACAGAGGATGTGTAG
Protein sequenceShow/hide protein sequence
MWFYFRRVIPNLVALCIKTQQRTLIFAGNSSGIVNTTTMATPGKAHAKPAIAGSEINLSTSGFLFGLSYIEGIKRPRGSRSSLQTGELDKTPEAIWYRVHTGYIPLLTLS
VLRDNDAVVKIELPVLDTLPTSAESSRSSSKYIAEGLEGANSVLQQSKEQNCHVTARVSLVHERSAWGKKKKTPKEKEAKRRKRQQKAEDQEIIQNVVEDIAAEVVEEGN
PKELEGQNPKQTDPTVADTEEVQEENTEEVQEKQTEDAQEGQTEDV