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Spg035384 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035384
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationscaffold2:24954807..24957247
RNA-Seq ExpressionSpg035384
SyntenySpg035384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]3.4e-1239.5Show/hide
Query:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA
        N  W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL+ SI+ S  IDV  II  ++H C  KK   + FPN IT LC++  V E+A
Subjt:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA

Query:  EDVILLDKRIINTPNLARL
         D IL     IN   L  L
Subjt:  EDVILLDKRIINTPNLARL

KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]4.4e-1240.95Show/hide
Query:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA
        N  W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL+ SI+ S  IDV +II  ++H C  KK   + FPN IT LC++  V E+A
Subjt:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA

Query:  EDVIL
         D IL
Subjt:  EDVIL

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]5.8e-1240Show/hide
Query:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA
        N  W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL+ S++ S  IDV +II  ++H C  KK   + FPN IT LC++  V E+A
Subjt:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA

Query:  EDVIL
         D IL
Subjt:  EDVIL

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]2.0e-1242.31Show/hide
Query:  ITNHG--WEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGV
        +TN G  W   K    + +  YLK  AN W  FV+   +P +H  T+S +R+LL+++IL   SI+V KII  EIH C +KK G ++FP+ IT LC +A V
Subjt:  ITNHG--WEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGV

Query:  PESA
           A
Subjt:  PESA

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.3e-1332.48Show/hide
Query:  TFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESAEDVILLDKRIIN
        T++A+ LK  AN W+ F++  L PTTHDS++S ++++L++ ++   +I+V K++   I  C +++ GK+FFP+ I  L  +AGVPE  +D+++ +     
Subjt:  TFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESAEDVILLDKRIIN

Query:  TPNLARLQRTQEARQGG
        T ++  + + +E  + G
Subjt:  TPNLARLQRTQEARQGG

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)8.1e-1236.8Show/hide
Query:  WEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESAEDV
        W  +     T   + L   A  W  F+K RLLPTTH  TVS DR+LL+ S+L   SI+V ++I SEI  C  +K G +FFP+ IT LC+ A  P      
Subjt:  WEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESAEDV

Query:  ILLDKRIINTPNLARLQRTQEARQG
        ++ ++++ NT  +  +   + A++G
Subjt:  ILLDKRIINTPNLARLQRTQEARQG

A0A5D2MA47 Uncharacterized protein9.6e-1342.31Show/hide
Query:  ITNHG--WEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGV
        +TN G  W   K    + +  YLK  AN W  FV+   +P +H  T+S +R+LL+++IL   SI+V KII  EIH C +KK G ++FP+ IT LC +A V
Subjt:  ITNHG--WEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGV

Query:  PESA
           A
Subjt:  PESA

A0A6A2WM54 Uncharacterized protein1.6e-1239.5Show/hide
Query:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA
        N  W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL+ SI+ S  IDV  II  ++H C  KK   + FPN IT LC++  V E+A
Subjt:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA

Query:  EDVILLDKRIINTPNLARL
         D IL     IN   L  L
Subjt:  EDVILLDKRIINTPNLARL

A0A6A2Y697 Reverse transcriptase domain-containing protein2.1e-1240.95Show/hide
Query:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA
        N  W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL+ SI+ S  IDV +II  ++H C  KK   + FPN IT LC++  V E+A
Subjt:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA

Query:  EDVIL
         D IL
Subjt:  EDVIL

A0A6A3BU96 Uncharacterized protein2.8e-1240Show/hide
Query:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA
        N  W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL+ S++ S  IDV +II  ++H C  KK   + FPN IT LC++  V E+A
Subjt:  NHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSILRSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESA

Query:  EDVIL
         D IL
Subjt:  EDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCACTTCCTGCTCTATTTCTCAGCTTTGTCTCGTTTCTTCTCGGTTCGAAGCTTCAATCTTTGGCTTTTTGGTGTCAATCTTCAGGCCCGCTTCAGCAAAATTG
GGTCTTTTCACCTCCTCGCCATCCAAGACATCGAGATGGCTCCAAAAACTCTGTAAAACGTGTGGAGCATCTGGCGCTTCCACGTGTCGCGCAGTGGAGATCAAACGGCA
TAGTCATTAGCCAGCACATCAGGGCATTTACCACGGGCGATTATTTTACCGTTTATGGGGATTTAATCCTGATGATTACATGCAAAATTAAAACGGTTGAAGAGGAAGAA
GTGCCAGTGACACTTGAGGCACCGAAAAAGAAAGCAAAAAGAAGAAGAAGACCTGAAGAAAGAGAGGCCAAAAGATTGAGAAGACAACATCAAGCTGAGGTAACAGTGGT
TCTGCGAAAAGTGATTGAGGATGTTGCAGAGGAAGTGGCTGGGGAAAAACAGCCAGCAGCACCTAAAGAAGGAAAAGACACTCCATCCCCGCCAACAACTGAATCAGAGA
AGGAAAACACAAAAAAAGAGGATCAAGAGAAGGAAGAGACTGAAAAGAAAGCTGAAGAAGAAGTCATGGCGAAGCAAGGAGAAGACAGAGGCAAAGGAGTTGCCGAAGCA
ACAGCCGAAGCAGCGGAAGAAGAAACTGAGGAACCGAGGTTGCCAGACGAATGCTTCGTCAACAATATTGCCAGAGCAAAATATTTAGAAATGCTGAAGAGAGATTTTCT
TTTTGAAAGAGGATTTCGAAACGACCTACCACACTTTCTACGAGCAGGGATTACTAATCACGGATGGGAGCAAGCGAAGACAGAAAAGTGTACCTTTCAAGCCGCTTATT
TGAAGAGCGAAGCAAACACCTGGCTGGGCTTCGTTAAATTGCGTCTTCTGCCGACAACCCATGACTCCACTGTCTCCAGTGATCGTGTTCTGTTAGTTTTTTCTATTCTG
AGGTCACTAAGCATCGATGTTTGTAAAATAATTTCTAGTGAGATTCATACCTGCTGGCGGAAGAAGGTGGGCAAGATTTTCTTTCCGAACACAATAACTCTACTCTGTCA
AAGAGCAGGGGTTCCAGAAAGTGCTGAAGATGTGATTTTATTAGATAAGAGAATCATAAACACACCCAACCTGGCAAGGCTTCAACGAACTCAAGAAGCACGACAAGGAG
GGTTGGTGTGCGGCATCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCCACTTCCTGCTCTATTTCTCAGCTTTGTCTCGTTTCTTCTCGGTTCGAAGCTTCAATCTTTGGCTTTTTGGTGTCAATCTTCAGGCCCGCTTCAGCAAAATTG
GGTCTTTTCACCTCCTCGCCATCCAAGACATCGAGATGGCTCCAAAAACTCTGTAAAACGTGTGGAGCATCTGGCGCTTCCACGTGTCGCGCAGTGGAGATCAAACGGCA
TAGTCATTAGCCAGCACATCAGGGCATTTACCACGGGCGATTATTTTACCGTTTATGGGGATTTAATCCTGATGATTACATGCAAAATTAAAACGGTTGAAGAGGAAGAA
GTGCCAGTGACACTTGAGGCACCGAAAAAGAAAGCAAAAAGAAGAAGAAGACCTGAAGAAAGAGAGGCCAAAAGATTGAGAAGACAACATCAAGCTGAGGTAACAGTGGT
TCTGCGAAAAGTGATTGAGGATGTTGCAGAGGAAGTGGCTGGGGAAAAACAGCCAGCAGCACCTAAAGAAGGAAAAGACACTCCATCCCCGCCAACAACTGAATCAGAGA
AGGAAAACACAAAAAAAGAGGATCAAGAGAAGGAAGAGACTGAAAAGAAAGCTGAAGAAGAAGTCATGGCGAAGCAAGGAGAAGACAGAGGCAAAGGAGTTGCCGAAGCA
ACAGCCGAAGCAGCGGAAGAAGAAACTGAGGAACCGAGGTTGCCAGACGAATGCTTCGTCAACAATATTGCCAGAGCAAAATATTTAGAAATGCTGAAGAGAGATTTTCT
TTTTGAAAGAGGATTTCGAAACGACCTACCACACTTTCTACGAGCAGGGATTACTAATCACGGATGGGAGCAAGCGAAGACAGAAAAGTGTACCTTTCAAGCCGCTTATT
TGAAGAGCGAAGCAAACACCTGGCTGGGCTTCGTTAAATTGCGTCTTCTGCCGACAACCCATGACTCCACTGTCTCCAGTGATCGTGTTCTGTTAGTTTTTTCTATTCTG
AGGTCACTAAGCATCGATGTTTGTAAAATAATTTCTAGTGAGATTCATACCTGCTGGCGGAAGAAGGTGGGCAAGATTTTCTTTCCGAACACAATAACTCTACTCTGTCA
AAGAGCAGGGGTTCCAGAAAGTGCTGAAGATGTGATTTTATTAGATAAGAGAATCATAAACACACCCAACCTGGCAAGGCTTCAACGAACTCAAGAAGCACGACAAGGAG
GGTTGGTGTGCGGCATCCATTAG
Protein sequenceShow/hide protein sequence
MTPLPALFLSFVSFLLGSKLQSLAFWCQSSGPLQQNWVFSPPRHPRHRDGSKNSVKRVEHLALPRVAQWRSNGIVISQHIRAFTTGDYFTVYGDLILMITCKIKTVEEEE
VPVTLEAPKKKAKRRRRPEEREAKRLRRQHQAEVTVVLRKVIEDVAEEVAGEKQPAAPKEGKDTPSPPTTESEKENTKKEDQEKEETEKKAEEEVMAKQGEDRGKGVAEA
TAEAAEEETEEPRLPDECFVNNIARAKYLEMLKRDFLFERGFRNDLPHFLRAGITNHGWEQAKTEKCTFQAAYLKSEANTWLGFVKLRLLPTTHDSTVSSDRVLLVFSIL
RSLSIDVCKIISSEIHTCWRKKVGKIFFPNTITLLCQRAGVPESAEDVILLDKRIINTPNLARLQRTQEARQGGLVCGIH