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Spg035397 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035397
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGH10 domain-containing protein
Genome locationscaffold2:24721350..24722379
RNA-Seq ExpressionSpg035397
SyntenySpg035397
Gene Ontology termsGO:0045493 - xylan catabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily
IPR044846 - Glycoside hydrolase family 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571918.1 Endo-1,4-beta-xylanase 5-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.1e-3080.72Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ DGSI LF+N+YNTIEYS DA+SSPA+YLQKLD+IRR+ GNSG +FAIGLES+ G SPNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

KAG7011604.1 rsgI6, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-3080.72Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ DGSI LF+N+YNTIEYS DA+SSPA+YLQKLD+IRR+ GNSG +FAIGLES+ G SPNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

XP_022952795.1 uncharacterized protein LOC111455386 [Cucurbita moschata]7.1e-3080.72Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ DGSI LF+N+YNTIEYS DA+SSPA+YLQKLD+IRR+ GNSG +FAIGLES+ G SPNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

XP_023553798.1 uncharacterized protein LOC111811263 [Cucurbita pepo subsp. pepo]2.4e-3081.93Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ DGSI LF+NEYNTIEYS DA+SSPA+YLQKLD+IRR+ GNSG +FAIGLES+ G SPNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

XP_038887131.1 endo-1,4-beta-xylanase 5-like [Benincasa hispida]3.2e-3084.34Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+AD SI LFLNE+NTIEYS DA+SSPARYLQKLDAIRRF GNSG +FAIGLES+ G +PNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

TrEMBL top hitse value%identityAlignment
A0A0A0K6B7 GH10 domain-containing protein1.6e-2779.52Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+AD SI LFLNE+NTIE S DA+SSPARYLQKLD IR+F GN G +FAIGLES+ G SPNI YMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

A0A5D3C4I2 Endoxylanase2.7e-2779.52Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+AD SI LFLNE+NTIE S DA+SSPARYLQKLDAIR+F GNS  +FAIGLES+ G SPN+ YMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

A0A6J1D3W0 uncharacterized protein LOC1110173511.4e-2881.93Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ADGSI LFLN+YNTIE   DASSSPARYLQKLD IRRF GNSG +FAIGLES+ GS P+I YMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

A0A6J1GMR3 uncharacterized protein LOC1114553863.4e-3080.72Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ DGSI LF+N+YNTIEYS DA+SSPA+YLQKLD+IRR+ GNSG +FAIGLES+ G SPNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

A0A6J1I4U7 uncharacterized protein LOC1114710116.5e-2979.52Show/hide
Query:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        M+ DGSI LF+NEYNTIE S DA+SSPA+YLQKLD+IR + GNSG +FAIGLES+ G SPNIPYMRSAIDTLGSAGVPIWLTE
Subjt:  MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

SwissProt top hitse value%identityAlignment
A0A1P8B8F8 Endo-1,4-beta-xylanase 57.4e-1445.68Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNL-GSSPNIPYMRSAIDTLGSAGVPIWLTE
        D  + +F+NEYNTIE   + +++P +  +K++ I  + GN   K AIG + +   + PN+ YMRSA+DTLGS G+PIWLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNL-GSSPNIPYMRSAIDTLGSAGVPIWLTE

O80596 Endo-1,4-beta-xylanase 22.2e-0535Show/hide
Query:  QADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE------NMHALGAKLNVL
        + D    LFLNEY+ IE   D+ SSP +Y++ +  +++     G    IG++ ++ +SP    +RSA+D L + G+PIW TE      N H  G  L V+
Subjt:  QADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE------NMHALGAKLNVL

Q680B7 Endo-1,4-beta-xylanase 43.7e-1346.91Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGS-SPNIPYMRSAIDTLGSAGVPIWLTE
        D  I LFLNE+NT+EY  D   SP   ++K+  I  F GN+  K  IG + +     PN+ YMR A+DTLGS   P+WLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGS-SPNIPYMRSAIDTLGSAGVPIWLTE

Q84WT5 Endo-1,4-beta-xylanase 5-like5.7e-1445.68Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLG-SSPNIPYMRSAIDTLGSAGVPIWLTE
        D  + LF+NEYNTIE + + +++P +  + ++ I  + GN   K AIG + + G + PN+ Y+RSA+DTLGS G+PIWLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLG-SSPNIPYMRSAIDTLGSAGVPIWLTE

Arabidopsis top hitse value%identityAlignment
AT4G33810.1 Glycosyl hydrolase superfamily protein5.3e-1545.68Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNL-GSSPNIPYMRSAIDTLGSAGVPIWLTE
        D  + +F+NEYNTIE   + +++P +  +K++ I  + GN   K AIG + +   + PN+ YMRSA+DTLGS G+PIWLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNL-GSSPNIPYMRSAIDTLGSAGVPIWLTE

AT4G33820.1 Glycosyl hydrolase superfamily protein4.0e-1545.68Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLG-SSPNIPYMRSAIDTLGSAGVPIWLTE
        D  + LF+NEYNTIE + + +++P +  + ++ I  + GN   K AIG + + G + PN+ Y+RSA+DTLGS G+PIWLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLG-SSPNIPYMRSAIDTLGSAGVPIWLTE

AT4G33830.1 Glycosyl hydrolase family 10 protein2.5e-1752.5Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        D S  +F+NE+ T+E  +D  +SPA+YL+KL  ++  R        IGLES+  S+PNIPYMRSA+DTLG+ G+PIWLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

AT4G33840.1 Glycosyl hydrolase family 10 protein5.1e-1858.67Show/hide
Query:  LFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        +F+NEYNT+E   D +SSPARYL KL  ++  R       AIGLES+  S+PNIPYMRSA+DT G+ G+PIWLTE
Subjt:  LFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE

AT4G33860.1 Glycosyl hydrolase family 10 protein7.9e-1958.75Show/hide
Query:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE
        D +  +F+NEYNT+E SSD+ SS ARYLQKL  IR  R        IGLES+   +PNIPYMRSA+DTL + G+PIWLTE
Subjt:  DGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCGATGGATCGATTTTGTTGTTCTTGAATGAGTACAATACCATTGAGTATAGCAGTGATGCGTCTTCTTCTCCGGCGAGGTATCTTCAGAAGCTAGATGCTAT
CAGGCGATTTCGTGGTAATAGCGGCAACAAATTTGCAATTGGATTGGAATCAAATTTGGGTTCTTCTCCTAACATTCCTTACATGAGATCCGCCATTGATACCCTTGGTT
CTGCTGGAGTACCGATTTGGCTCACCGAAAACATGCATGCTTTAGGAGCAAAATTGAATGTCTTAAGTGCTTCCGATCTTCAATTGCTTCCGCATGTGTTATATGAACAC
CTTCAAAAAGGTCACAGCGTCGGAATTTTCCTAAACAGAATGGCGGCAATTGGCATAGCGTCGCGACGCTGTGTCCATAGCTTCGCGACCCGATCGACAGATTTTCTATA
TAATCTTCTTTTTGAGCTACGGATTAGGGGAGTCCAATTGGTTAGATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCGATGGATCGATTTTGTTGTTCTTGAATGAGTACAATACCATTGAGTATAGCAGTGATGCGTCTTCTTCTCCGGCGAGGTATCTTCAGAAGCTAGATGCTAT
CAGGCGATTTCGTGGTAATAGCGGCAACAAATTTGCAATTGGATTGGAATCAAATTTGGGTTCTTCTCCTAACATTCCTTACATGAGATCCGCCATTGATACCCTTGGTT
CTGCTGGAGTACCGATTTGGCTCACCGAAAACATGCATGCTTTAGGAGCAAAATTGAATGTCTTAAGTGCTTCCGATCTTCAATTGCTTCCGCATGTGTTATATGAACAC
CTTCAAAAAGGTCACAGCGTCGGAATTTTCCTAAACAGAATGGCGGCAATTGGCATAGCGTCGCGACGCTGTGTCCATAGCTTCGCGACCCGATCGACAGATTTTCTATA
TAATCTTCTTTTTGAGCTACGGATTAGGGGAGTCCAATTGGTTAGATTTTAG
Protein sequenceShow/hide protein sequence
MQADGSILLFLNEYNTIEYSSDASSSPARYLQKLDAIRRFRGNSGNKFAIGLESNLGSSPNIPYMRSAIDTLGSAGVPIWLTENMHALGAKLNVLSASDLQLLPHVLYEH
LQKGHSVGIFLNRMAAIGIASRRCVHSFATRSTDFLYNLLFELRIRGVQLVRF