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Spg035429 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035429
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold3:4265399..4266719
RNA-Seq ExpressionSpg035429
SyntenySpg035429
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049837.1 hypothetical protein E6C27_scaffold1591G00330 [Cucumis melo var. makuwa]9.3e-0448.94Show/hide
Query:  EATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITE
        EA  W+ ++K ++MPT HD T+SI+RM+L Y IM+ L +N+G  I+E
Subjt:  EATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITE

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]9.3e-0445.1Show/hide
Query:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK
        W H++K+++MPT+H+ T+S QRM+L +SI+ G  I++G II E  H   K+
Subjt:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]2.4e-0447.06Show/hide
Query:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK
        W H++K++++PT+H+ T+S QRMIL +SI+ GL I++G II E  H   K+
Subjt:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein1.0e-0336.62Show/hide
Query:  ATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKKLKG------VMSCLCQN
        A  W H++K+R++PTTH  T+S  RM+L YS++ G +IN+G +I       A +  G      +++ LC+N
Subjt:  ATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKKLKG------VMSCLCQN

A0A5A7U670 Uncharacterized protein4.5e-0448.94Show/hide
Query:  EATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITE
        EA  W+ ++K ++MPT HD T+SI+RM+L Y IM+ L +N+G  I+E
Subjt:  EATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITE

A0A6A2ZSK6 Integrase catalytic domain-containing protein7.6e-0437.31Show/hide
Query:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK------LKGVMSCLCQ
        W H++K++++PT+H+ T+S QRM+L +SI+ G  I++G II E  H   K+         +++ LCQ
Subjt:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK------LKGVMSCLCQ

A0A6A2ZUE4 Uncharacterized protein4.5e-0445.1Show/hide
Query:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK
        W H++K+++MPT+H+ T+S QRM+L +SI+ G  I++G II E  H   K+
Subjt:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein1.2e-0447.06Show/hide
Query:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK
        W H++K++++PT+H+ T+S QRMIL +SI+ GL I++G II E  H   K+
Subjt:  WMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGTAAAAGGCAAAGCCTTATGCCAGCACGAAGAAGCGCAAAAGGTTGCGGCAGACGAAGCCGCAAGAAAAACAGCCGCAGAGCTGGAAGTTGCGGCACAAAGAGA
AAGGGAGCGCATTGAGAAGGAAGTGCAAGAAAAAGCGGAAGAAGAGATCGCTGCTGTAGGACTGGCCGCAAAAGCTGAGGCCAGCGCAGCCCAAAGCATACCAACTAAAG
AAAGAGAGTCTGATTTTGTAGACTCTGAAGATGAAGTCCCTCTGCGACAGCGCTGGTCATTAGAGAGTTGCTGCAGCACAACAAAGTTGGGCCTAGTGGCCAGAAGAAGA
GAGAAAGAGCCCCCATCGCAGCAGCAAAGGGCAAAGAGAAAGTGGAATCCTGCGGCCGTAGTTGCTCACCTTGAGGCCACAACATGGATGCACTGGATCAAGAACCGTAT
CATGCCCACAACGCATGATGCCACGCTGTCTATTCAACGCATGATCCTGTGCTACAGCATCATGAAGGGTCTTGCGATTAACTTGGGCCCAATCATCACCGAAGCCTTCC
ACCAGACCGCAAAAAAGCTGAAAGGGGTGATGTCCTGCCTTTGCCAGAATCCTTCCAGCGCCAGCGCAACAACAGGAAGCATCTCCTGCGGTAGAGGAGCAGCCGCTAGT
GCTAGCACCTCAGAAAATGCGCTTAGGCCAAATGCGCCAGTGCCCACCGCGAGCATCACTCCAGAGCAGAAAATCGATGTCTGCACTGTAAATCACCAACCATCTCTACC
GCGAATCGACTCACCGCTGTGCCAAGACTTCGAGCAAGAGGAGCACTTGGCGCCTGTTAACCAAGTGAAAGTCTGCAATCAGCAGACTAATCAAGAAGATGCCCAAAAGA
TATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGTAAAAGGCAAAGCCTTATGCCAGCACGAAGAAGCGCAAAAGGTTGCGGCAGACGAAGCCGCAAGAAAAACAGCCGCAGAGCTGGAAGTTGCGGCACAAAGAGA
AAGGGAGCGCATTGAGAAGGAAGTGCAAGAAAAAGCGGAAGAAGAGATCGCTGCTGTAGGACTGGCCGCAAAAGCTGAGGCCAGCGCAGCCCAAAGCATACCAACTAAAG
AAAGAGAGTCTGATTTTGTAGACTCTGAAGATGAAGTCCCTCTGCGACAGCGCTGGTCATTAGAGAGTTGCTGCAGCACAACAAAGTTGGGCCTAGTGGCCAGAAGAAGA
GAGAAAGAGCCCCCATCGCAGCAGCAAAGGGCAAAGAGAAAGTGGAATCCTGCGGCCGTAGTTGCTCACCTTGAGGCCACAACATGGATGCACTGGATCAAGAACCGTAT
CATGCCCACAACGCATGATGCCACGCTGTCTATTCAACGCATGATCCTGTGCTACAGCATCATGAAGGGTCTTGCGATTAACTTGGGCCCAATCATCACCGAAGCCTTCC
ACCAGACCGCAAAAAAGCTGAAAGGGGTGATGTCCTGCCTTTGCCAGAATCCTTCCAGCGCCAGCGCAACAACAGGAAGCATCTCCTGCGGTAGAGGAGCAGCCGCTAGT
GCTAGCACCTCAGAAAATGCGCTTAGGCCAAATGCGCCAGTGCCCACCGCGAGCATCACTCCAGAGCAGAAAATCGATGTCTGCACTGTAAATCACCAACCATCTCTACC
GCGAATCGACTCACCGCTGTGCCAAGACTTCGAGCAAGAGGAGCACTTGGCGCCTGTTAACCAAGTGAAAGTCTGCAATCAGCAGACTAATCAAGAAGATGCCCAAAAGA
TATAG
Protein sequenceShow/hide protein sequence
MGVKGKALCQHEEAQKVAADEAARKTAAELEVAAQRERERIEKEVQEKAEEEIAAVGLAAKAEASAAQSIPTKERESDFVDSEDEVPLRQRWSLESCCSTTKLGLVARRR
EKEPPSQQQRAKRKWNPAAVVAHLEATTWMHWIKNRIMPTTHDATLSIQRMILCYSIMKGLAINLGPIITEAFHQTAKKLKGVMSCLCQNPSSASATTGSISCGRGAAAS
ASTSENALRPNAPVPTASITPEQKIDVCTVNHQPSLPRIDSPLCQDFEQEEHLAPVNQVKVCNQQTNQEDAQKI