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Spg035454 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035454
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description26S proteasome regulatory subunit 6A homolog
Genome locationscaffold3:1898349..1902256
RNA-Seq ExpressionSpg035454
SyntenySpg035454
Gene Ontology termsGO:0016094 - polyprenol biosynthetic process (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0008540 - proteasome regulatory particle, base subcomplex (cellular component)
GO:0002094 - polyprenyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN26437.1 unknown [Zea mays]4.0e-1190.24Show/hide
Query:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP
        F +ILEMNPEDEA+EDGANIDLDSQRKGKCVVLKTSTRQ+P
Subjt:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP

EMS45056.1 26S protease regulatory subunit 6A-like protein A [Triticum urartu]9.6e-1375.44Show/hide
Query:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        ++D  C F W  TN +    QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

VAH67643.1 unnamed protein product [Triticum turgidum subsp. durum]9.6e-1375.44Show/hide
Query:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        ++D  C F W  TN +    QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

XP_008659229.1 dehydrodolichyl diphosphate synthase 6 isoform X1 [Zea mays]4.0e-1190.24Show/hide
Query:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP
        F +ILEMNPEDEA+EDGANIDLDSQRKGKCVVLKTSTRQ+P
Subjt:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP

XP_022746762.1 26S proteasome regulatory subunit 6A homolog isoform X2 [Durio zibethinus]1.5e-1086.05Show/hide
Query:  NPVAFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        N +   +ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  NPVAFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

TrEMBL top hitse value%identityAlignment
A0A1D6NU49 Dehydrodolichyl diphosphate synthase 61.9e-1190.24Show/hide
Query:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP
        F +ILEMNPEDEA+EDGANIDLDSQRKGKCVVLKTSTRQ+P
Subjt:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP

A0A446NZS6 AAA domain-containing protein4.6e-1375.44Show/hide
Query:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        ++D  C F W  TN +    QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

A0A6P5Z2C2 26S proteasome regulatory subunit 6A homolog isoform X27.4e-1186.05Show/hide
Query:  NPVAFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        N +   +ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  NPVAFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

C0HHD4 Uncharacterized protein1.9e-1190.24Show/hide
Query:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP
        F +ILEMNPEDEA+EDGANIDLDSQRKGKCVVLKTSTRQ+P
Subjt:  FGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEP

M7YEE2 26S protease regulatory subunit 6A-like protein A4.6e-1375.44Show/hide
Query:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        ++D  C F W  TN +    QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  FLDCNC-FAWLGTNPV-AFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

SwissProt top hitse value%identityAlignment
O04019 26S proteasome regulatory subunit 6A homolog B3.8e-1291.89Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

O23894 26S proteasome regulatory subunit 6A homolog9.9e-1394.59Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

P46465 26S proteasome regulatory subunit 6A homolog4.5e-1397.3Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

P54776 26S proteasome regulatory subunit 6A homolog1.3e-1294.59Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

Q9SEI2 26S proteasome regulatory subunit 6A homolog A9.9e-1394.59Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

Arabidopsis top hitse value%identityAlignment
AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B2.7e-1391.89Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ

AT3G05530.1 regulatory particle triple-A ATPase 5A7.1e-1494.59Show/hide
Query:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ
        +ILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQ
Subjt:  QILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTCTCCAACTCCCTCATATCCTCCAACGAGCTACAACGGCGGAAACTGAATAAAAGTAAGAAATCGGGGTTGGATGCGAGGAGAATGATGGATTTTCTCGATTG
CAATTGCTTCGCGTGGCTGGGCACGAATCCTGTAGCGTTTGGCCAAATTTTGGAAATGAACCCAGAAGATGAAGCAGAGGAAGATGGTGCAAATATTGATCTTGATTCAC
AAAGGAAAGGAAAATGTGTCGTACTGAAGACATCCACTCGCCAGGAGCCTTTGCACTACTTCTATGTCAAGCATAGTCCGTTCTTGTGTACTGAGGAGCAAGTCGTTGAT
GAAAAATCAAAGAATATACCAGTTAGTGAATTTGATAAGCGTTGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAAGAATGAAAGTGACATGTACGAGAATTT
TTGTTTTTTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACTTCTCCAACTCCCTCATATCCTCCAACGAGCTACAACGGCGGAAACTGAATAAAAGTAAGAAATCGGGGTTGGATGCGAGGAGAATGATGGATTTTCTCGATTG
CAATTGCTTCGCGTGGCTGGGCACGAATCCTGTAGCGTTTGGCCAAATTTTGGAAATGAACCCAGAAGATGAAGCAGAGGAAGATGGTGCAAATATTGATCTTGATTCAC
AAAGGAAAGGAAAATGTGTCGTACTGAAGACATCCACTCGCCAGGAGCCTTTGCACTACTTCTATGTCAAGCATAGTCCGTTCTTGTGTACTGAGGAGCAAGTCGTTGAT
GAAAAATCAAAGAATATACCAGTTAGTGAATTTGATAAGCGTTGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAAGAATGAAAGTGACATGTACGAGAATTT
TTGTTTTTTGGTGTAG
Protein sequenceShow/hide protein sequence
MHFSNSLISSNELQRRKLNKSKKSGLDARRMMDFLDCNCFAWLGTNPVAFGQILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQEPLHYFYVKHSPFLCTEEQVVD
EKSKNIPVSEFDKRCSSSLMYEQDYGDKNESDMYENFCFLV