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Spg035483 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035483
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:2865866..2867206
RNA-Seq ExpressionSpg035483
SyntenySpg035483
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.3e-1638.46Show/hide
Query:  WRE--INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILR
        W E  IN++F L D +  H+ F E +   +   L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L 
Subjt:  WRE--INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILR

Query:  SSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
          SI+VG++I +EI  C  +K G L FP+ IT LC  AR P    +  L + G ID
Subjt:  SSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.0e-1634.64Show/hide
Query:  LKRDFLFERGFGEDLPHFLRAEIANHGWREINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLR
        L R+F       E+   ++R    +     IN++F L D +    +E +   +   L   +  V   GA+W +S     T   + L   A  W  F+K R
Subjt:  LKRDFLFERGFGEDLPHFLRAEIANHGWREINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLR

Query:  LLPTTHDSTVSRDRVLLVFAILRSSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
        LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI  C  +K G L FP+ IT LC  AR P    +  L + G ID
Subjt:  LLPTTHDSTVSRDRVLLVFAILRSSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]1.7e-1637.09Show/hide
Query:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID
        IN+++ L D +  H+ F E +  P   +L   +  V I GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++RVLL++++L   SI+
Subjt:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID

Query:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
        +G++I  EI  C  +K G L FP+ I  +C  AR P    +  L + G ID
Subjt:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.6e-1739.07Show/hide
Query:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID
        IN+++ L D +  H+ F E +  P   +L   +  V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+
Subjt:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID

Query:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
        VG+II  EI     +K G L FP+ IT +C  AR P    +  L + G ID
Subjt:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]5.3e-1840.15Show/hide
Query:  REINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID
        + IN LFNL D     +  M+   + D L   +  V   G+QW + K    + +  YLK  AN W  F++   +P +H  T+S +R+LL++AIL   SI+
Subjt:  REINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID

Query:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPT
        VGKII  EI+NC  KK G + FP+ IT LC +A V T
Subjt:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPT

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)6.4e-1738.46Show/hide
Query:  WRE--INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILR
        W E  IN++F L D +  H+ F E +   +   L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L 
Subjt:  WRE--INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILR

Query:  SSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
          SI+VG++I +EI  C  +K G L FP+ IT LC  AR P    +  L + G ID
Subjt:  SSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

A0A2P5BCG4 Uncharacterized protein (Fragment)4.9e-1734.64Show/hide
Query:  LKRDFLFERGFGEDLPHFLRAEIANHGWREINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLR
        L R+F       E+   ++R    +     IN++F L D +    +E +   +   L   +  V   GA+W +S     T   + L   A  W  F+K R
Subjt:  LKRDFLFERGFGEDLPHFLRAEIANHGWREINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLR

Query:  LLPTTHDSTVSRDRVLLVFAILRSSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
        LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI  C  +K G L FP+ IT LC  AR P    +  L + G ID
Subjt:  LLPTTHDSTVSRDRVLLVFAILRSSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

A0A2P5BNT0 Uncharacterized protein (Fragment)8.3e-1737.09Show/hide
Query:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID
        IN+++ L D +  H+ F E +  P   +L   +  V I GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++RVLL++++L   SI+
Subjt:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID

Query:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
        +G++I  EI  C  +K G L FP+ I  +C  AR P    +  L + G ID
Subjt:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

A0A2P5CPE8 Uncharacterized protein1.3e-1739.07Show/hide
Query:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID
        IN+++ L D +  H+ F E +  P   +L   +  V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+
Subjt:  INSLFNLQDFL--HAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID

Query:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID
        VG+II  EI     +K G L FP+ IT +C  AR P    +  L + G ID
Subjt:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIID

A0A5D2MA47 Uncharacterized protein2.6e-1840.15Show/hide
Query:  REINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID
        + IN LFNL D     +  M+   + D L   +  V   G+QW + K    + +  YLK  AN W  F++   +P +H  T+S +R+LL++AIL   SI+
Subjt:  REINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDSTVSRDRVLLVFAILRSSSID

Query:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPT
        VGKII  EI+NC  KK G + FP+ IT LC +A V T
Subjt:  VGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACAAGAGGCCGTAAAGAAAGGGATGTTGAGGAAGAGGAAGTGCCGATTACACCTCAGGCACCAAAGACAAAAACGAAGAGAAGGAAGACGCCGGAAGAGAG
AGAGGTCAAGAGAAGAAGACCACAACAGCGAGCTGAGGCTGTAGAAGTAGTACGGAAAGTGGTCGAAGACATTGCTGAAGAAGCGGTTGAGGGAGAACAACCAAAAGAAC
CTGAGGAAAAGAAAGATGCTGAAAAAAGTGAACAGAAAGTTGAAAATATACAAGAGGGACAAGAGAAGCGAGAAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAA
CAGACTCAAGAAGTTGTGCCGAAGATTCCACGTCGTCGCCACCGCAAGAAAAAGGCGGGACGAATTAAGGTGATCAGGACAGACACTCCATCTTCGTCGACGACAGAATA
TGAGAAAGAAAATTCTGAGAAAGAAGAGCAAGAGAAAGAAGGGGCAGAGGACCAGGAAAGAGAAGAAACAGAAAAGAAGGCAGAAGAAGAAGCTTTGACGAAACATCAAG
AAGACAAGGGCAAGGGAGTTGCTGAAGCAACGGATGAAGAAGAAGATGAAGAATCAGGAATGCCGTTTATTCGCTTCGTCAATGAACTTGCCAGAGCAAAATACAGACAG
ATGTTGAAAAGGGATTTCTTATTTGAAAGAGGCTTCGGTGAAGATTTACCACATTTCTTGAGGGCTGAAATTGCAAATCACGGATGGAGAGAGATAAATTCTCTCTTCAA
CCTCCAAGATTTTCTACATGCCGGATTTAATGAGATGGTGGTGGCACCATCTAATGATCAATTGAACGCGACTGTCAGGGAGGTTGGTATTGATGGGGCCCAGTGGAGAT
TGTCAAAGACGGAGAAACGCACGTTCCAAGCAGCCTATTTGAAGAGTGAGGCAAACGCATGGTTGAGTTTCATCAAATTGCGTTTGCTTCCGACAACTCATGACTCGACA
GTATCCCGAGATAGAGTGCTTCTGGTATTTGCCATTCTGCGATCCTCGAGTATAGATGTTGGTAAGATTATTTCTAATGAAATCTATAATTGCTGGTGTAAGAAGGTGGG
AAAACTGATCTTCCCAAACACGATTACCATGTTGTGCAGCAGGGCAAGAGTGCCCACGAGTCCAGAGGATGTTATTTTACTTGATAAGGGGATTATAGATACGCCCAATT
TGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACAAGAGGCCGTAAAGAAAGGGATGTTGAGGAAGAGGAAGTGCCGATTACACCTCAGGCACCAAAGACAAAAACGAAGAGAAGGAAGACGCCGGAAGAGAG
AGAGGTCAAGAGAAGAAGACCACAACAGCGAGCTGAGGCTGTAGAAGTAGTACGGAAAGTGGTCGAAGACATTGCTGAAGAAGCGGTTGAGGGAGAACAACCAAAAGAAC
CTGAGGAAAAGAAAGATGCTGAAAAAAGTGAACAGAAAGTTGAAAATATACAAGAGGGACAAGAGAAGCGAGAAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAA
CAGACTCAAGAAGTTGTGCCGAAGATTCCACGTCGTCGCCACCGCAAGAAAAAGGCGGGACGAATTAAGGTGATCAGGACAGACACTCCATCTTCGTCGACGACAGAATA
TGAGAAAGAAAATTCTGAGAAAGAAGAGCAAGAGAAAGAAGGGGCAGAGGACCAGGAAAGAGAAGAAACAGAAAAGAAGGCAGAAGAAGAAGCTTTGACGAAACATCAAG
AAGACAAGGGCAAGGGAGTTGCTGAAGCAACGGATGAAGAAGAAGATGAAGAATCAGGAATGCCGTTTATTCGCTTCGTCAATGAACTTGCCAGAGCAAAATACAGACAG
ATGTTGAAAAGGGATTTCTTATTTGAAAGAGGCTTCGGTGAAGATTTACCACATTTCTTGAGGGCTGAAATTGCAAATCACGGATGGAGAGAGATAAATTCTCTCTTCAA
CCTCCAAGATTTTCTACATGCCGGATTTAATGAGATGGTGGTGGCACCATCTAATGATCAATTGAACGCGACTGTCAGGGAGGTTGGTATTGATGGGGCCCAGTGGAGAT
TGTCAAAGACGGAGAAACGCACGTTCCAAGCAGCCTATTTGAAGAGTGAGGCAAACGCATGGTTGAGTTTCATCAAATTGCGTTTGCTTCCGACAACTCATGACTCGACA
GTATCCCGAGATAGAGTGCTTCTGGTATTTGCCATTCTGCGATCCTCGAGTATAGATGTTGGTAAGATTATTTCTAATGAAATCTATAATTGCTGGTGTAAGAAGGTGGG
AAAACTGATCTTCCCAAACACGATTACCATGTTGTGCAGCAGGGCAAGAGTGCCCACGAGTCCAGAGGATGTTATTTTACTTGATAAGGGGATTATAGATACGCCCAATT
TGGCTTGA
Protein sequenceShow/hide protein sequence
MAKTRGRKERDVEEEEVPITPQAPKTKTKRRKTPEEREVKRRRPQQRAEAVEVVRKVVEDIAEEAVEGEQPKEPEEKKDAEKSEQKVENIQEGQEKREEDVQGQGNGQEQ
QTQEVVPKIPRRRHRKKKAGRIKVIRTDTPSSSTTEYEKENSEKEEQEKEGAEDQEREETEKKAEEEALTKHQEDKGKGVAEATDEEEDEESGMPFIRFVNELARAKYRQ
MLKRDFLFERGFGEDLPHFLRAEIANHGWREINSLFNLQDFLHAGFNEMVVAPSNDQLNATVREVGIDGAQWRLSKTEKRTFQAAYLKSEANAWLSFIKLRLLPTTHDST
VSRDRVLLVFAILRSSSIDVGKIISNEIYNCWCKKVGKLIFPNTITMLCSRARVPTSPEDVILLDKGIIDTPNLA