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Spg035537 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035537
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold3:1594265..1596307
RNA-Seq ExpressionSpg035537
SyntenySpg035537
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.9e-1057.35Show/hide
Query:  MGVLGGPHYIVELVNVGCTGRALHNVDLSC---------STIQQGQQVSLEEDDVCWLHAIYRTKLAG
        MGVLG   YIVELVNVGCTG ALHN DLSC         S IQQ +Q+ ++E DV  LH ++R+KL G
Subjt:  MGVLGGPHYIVELVNVGCTGRALHNVDLSC---------STIQQGQQVSLEEDDVCWLHAIYRTKLAG

TYK02142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.0e-1052.63Show/hide
Query:  MGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQ--------------QGQQVSLEEDDVCWLHAIYRTKLAGLRD
        MGVL GP+YIVELVNVGCTG ALHNVDLSC + +                +QV LEE D   LHA+++ KLA +R+
Subjt:  MGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQ--------------QGQQVSLEEDDVCWLHAIYRTKLAGLRD

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]2.6e-0635.58Show/hide
Query:  KTMGVLGGPHYIVELVNVGCTGRALHNVDLSC-----------------------------------STIQQGQQVSLE--------EDDVCWLHAIYRT
        K  GV GGPHYIV LVNVGCTGR LH++D S                                    S ++   ++  E        E+DVCWLHA++R 
Subjt:  KTMGVLGGPHYIVELVNVGCTGRALHNVDLSC-----------------------------------STIQQGQQVSLE--------EDDVCWLHAIYRT

Query:  KLAG
        K+AG
Subjt:  KLAG

TYK11281.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.5e-0665.91Show/hide
Query:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQQGQQVS
        M K M VL G HYIVEL NVGC GRALHNVDLSC +I+   ++S
Subjt:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQQGQQVS

TYK21003.1 G-box-binding factor 1-like [Cucumis melo var. makuwa]1.4e-0785.29Show/hide
Query:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSC
        MTKTMG+LG PHYIVEL+NVGC G ALHNVDLSC
Subjt:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSC

TrEMBL top hitse value%identityAlignment
A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-1057.35Show/hide
Query:  MGVLGGPHYIVELVNVGCTGRALHNVDLSC---------STIQQGQQVSLEEDDVCWLHAIYRTKLAG
        MGVLG   YIVELVNVGCTG ALHN DLSC         S IQQ +Q+ ++E DV  LH ++R+KL G
Subjt:  MGVLGGPHYIVELVNVGCTGRALHNVDLSC---------STIQQGQQVSLEEDDVCWLHAIYRTKLAG

A0A5D3BTL2 CACTA en-spm transposon protein4.9e-1152.63Show/hide
Query:  MGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQ--------------QGQQVSLEEDDVCWLHAIYRTKLAGLRD
        MGVL GP+YIVELVNVGCTG ALHNVDLSC + +                +QV LEE D   LHA+++ KLA +R+
Subjt:  MGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQ--------------QGQQVSLEEDDVCWLHAIYRTKLAGLRD

A0A5D3CAC6 Uncharacterized protein1.3e-0635.58Show/hide
Query:  KTMGVLGGPHYIVELVNVGCTGRALHNVDLSC-----------------------------------STIQQGQQVSLE--------EDDVCWLHAIYRT
        K  GV GGPHYIV LVNVGCTGR LH++D S                                    S ++   ++  E        E+DVCWLHA++R 
Subjt:  KTMGVLGGPHYIVELVNVGCTGRALHNVDLSC-----------------------------------STIQQGQQVSLE--------EDDVCWLHAIYRT

Query:  KLAG
        K+AG
Subjt:  KLAG

A0A5D3CHK1 Putative DNA/RNA polymerases superfamily protein3.6e-0665.91Show/hide
Query:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQQGQQVS
        M K M VL G HYIVEL NVGC GRALHNVDLSC +I+   ++S
Subjt:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQQGQQVS

A0A5D3DBQ7 G-box-binding factor 1-like6.7e-0885.29Show/hide
Query:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSC
        MTKTMG+LG PHYIVEL+NVGC G ALHNVDLSC
Subjt:  MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCTGTCATGTTCAACGAT
TCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTATCGGACTAAGCTAGCAGGCCTTCGTGACAATTCTTTAGCAAGAGCAAGCT
TGTTTGCACGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCTGTCATGTTCAACGAT
TCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTATCGGACTAAGCTAGCAGGCCTTCGTGACAATTCTTTAGCAAGAGCAAGCT
TGTTTGCACGCTAA
Protein sequenceShow/hide protein sequence
MTKTMGVLGGPHYIVELVNVGCTGRALHNVDLSCSTIQQGQQVSLEEDDVCWLHAIYRTKLAGLRDNSLARASLFAR