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Spg035543 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035543
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold3:2946570..2948853
RNA-Seq ExpressionSpg035543
SyntenySpg035543
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148911.1 uncharacterized protein LOC111017461 [Momordica charantia]2.8e-1932.16Show/hide
Query:  CLSRSFIPLKKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQ
        C   S + + ++I YEIG R+KD+R++L+R+YK + D   A  +P+KD+ QEDWN+LCD+  +  WK                               E+
Subjt:  CLSRSFIPLKKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQ

Query:  MVALSQEQASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQ---------REENARMEAKMKEQLDQVMEMQRDEYERRFRQMGEL
        M+ L    AS     ++E+IM TVLG RS+YV GMGYGPKP   +  +S   D+         ++    M    +EQ+ + +E Q  E+ R+  +M ++
Subjt:  MVALSQEQASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQ---------REENARMEAKMKEQLDQVMEMQRDEYERRFRQMGEL

XP_022159083.1 uncharacterized protein LOC111025525 [Momordica charantia]2.2e-1936.24Show/hide
Query:  SRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPLK---------------------------------KFIHYEIGNR
        +R +G + G  L R++  +G ++ +  T +QG+PVG  +  FN+EIG L+R++I  K                                 ++I YEIG R
Subjt:  SRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPLK---------------------------------KFIHYEIGNR

Query:  YKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ
        +KD+R++LHR+YK   DP  A  +P+KD+ QE WN+LCDRW +P WKE+
Subjt:  YKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ

XP_038895319.1 uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]8.0e-2238.75Show/hide
Query:  TVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPL---------------------------------
        T DM  A     RVRG S GV L++    +G R+ ++ TP QG+P+G +A++FN EIG L R FIPL                                 
Subjt:  TVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPL---------------------------------

Query:  KKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ
        K++I+YEIGNR+KD+R  L+++Y+   DP  A   P+K  T +DWN+LCDRW +  WKE+
Subjt:  KKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ

XP_038895320.1 uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]8.0e-2238.75Show/hide
Query:  TVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPL---------------------------------
        T DM  A     RVRG S GV L++    +G R+ ++ TP QG+P+G +A++FN EIG L R FIPL                                 
Subjt:  TVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPL---------------------------------

Query:  KKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ
        K++I+YEIGNR+KD+R  L+++Y+   DP  A   P+K  T +DWN+LCDRW +  WKE+
Subjt:  KKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ

XP_038895321.1 uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]8.0e-2238.75Show/hide
Query:  TVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPL---------------------------------
        T DM  A     RVRG S GV L++    +G R+ ++ TP QG+P+G +A++FN EIG L R FIPL                                 
Subjt:  TVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPL---------------------------------

Query:  KKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ
        K++I+YEIGNR+KD+R  L+++Y+   DP  A   P+K  T +DWN+LCDRW +  WKE+
Subjt:  KKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ

TrEMBL top hitse value%identityAlignment
A0A438I7V1 Uncharacterized protein1.1e-1627.34Show/hide
Query:  VRGVSHGVGLDRIIKAIGDR-LSISSTPEQGQPVGRVANMFNTEIGCLSRSFIP-----------------------------------------LKKFI
        VRG + GV LD++I+A G + L I+  P  G+  G+     + EIG   R   P                                         +KK +
Subjt:  VRGVSHGVGLDRIIKAIGDR-LSISSTPEQGQPVGRVANMFNTEIGCLSRSFIP-----------------------------------------LKKFI

Query:  HYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVT-QEDWNMLCDRWATPEWKEQMVALSQEQ-ASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQ
          ++ +R+++WR  LH+++K       A   PH+ V+ QEDW+ LCDR+++ E+KE+M+ L ++  A  +  +++ +I   VLG +S YVKG+G+GPKP 
Subjt:  HYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVT-QEDWNMLCDRWATPEWKEQMVALSQEQ-ASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQ

Query:  HPQKKASYSQDQREENARMEAKMKEQLDQVMEMQRDEYERRFRQMGELMERFTGAH
            K+  S  +RE          + L +  + Q +  + R  Q+  L+++    H
Subjt:  HPQKKASYSQDQREENARMEAKMKEQLDQVMEMQRDEYERRFRQMGELMERFTGAH

A0A6J1CQT5 uncharacterized protein LOC1110134763.1e-1933.5Show/hide
Query:  KFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQMVALSQEQAS
        ++I YEIG R+KD+R++L+R+YK + D   A  +P+KD+ QEDWN+LCD+  +  WK                               E+M+ L    AS
Subjt:  KFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQMVALSQEQAS

Query:  SSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQ---------REENARMEAKMKEQLDQVMEMQRDEYERRFRQMGELMERFTGAHPSI
             ++E+IM TVLG RS+YV GMGYGPKP   +  +S   D+         ++    M    +EQ+ + +E Q  E+ R+  +M + M    G   S 
Subjt:  SSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQ---------REENARMEAKMKEQLDQVMEMQRDEYERRFRQMGELMERFTGAHPSI

Query:  SKD
        SKD
Subjt:  SKD

A0A6J1D6S9 uncharacterized protein LOC1110174611.4e-1932.16Show/hide
Query:  CLSRSFIPLKKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQ
        C   S + + ++I YEIG R+KD+R++L+R+YK + D   A  +P+KD+ QEDWN+LCD+  +  WK                               E+
Subjt:  CLSRSFIPLKKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQ

Query:  MVALSQEQASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQ---------REENARMEAKMKEQLDQVMEMQRDEYERRFRQMGEL
        M+ L    AS     ++E+IM TVLG RS+YV GMGYGPKP   +  +S   D+         ++    M    +EQ+ + +E Q  E+ R+  +M ++
Subjt:  MVALSQEQASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQ---------REENARMEAKMKEQLDQVMEMQRDEYERRFRQMGEL

A0A6J1DLF1 uncharacterized protein LOC1110211382.4e-1940.91Show/hide
Query:  KFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQMVALSQEQAS
        ++I YEIG R+KD+R++LHR+YK   D   A  +P+KD+ QEDWN+LCDR   P WK                               E+M+ L    AS
Subjt:  KFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWK-------------------------------EQMVALSQEQAS

Query:  SSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQ
             ++E+IM TVLG RS+Y+ GMGYGPKP+
Subjt:  SSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQ

A0A6J1DXU5 uncharacterized protein LOC1110255251.1e-1936.24Show/hide
Query:  SRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPLK---------------------------------KFIHYEIGNR
        +R +G + G  L R++  +G ++ +  T +QG+PVG  +  FN+EIG L+R++I  K                                 ++I YEIG R
Subjt:  SRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPLK---------------------------------KFIHYEIGNR

Query:  YKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ
        +KD+R++LHR+YK   DP  A  +P+KD+ QE WN+LCDRW +P WKE+
Subjt:  YKDWRSRLHRYYKMIGDPEVAHTRPHKDVTQEDWNMLCDRWATPEWKEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCAAATAACGAAGTCAACACGGTAGACATGGATGAGGCATCCTCTCACAGTTCCCGAGTTCGTGGCGTTTCCCATGGGGTTGGTCTTGATAGGATTATTAAGGC
CATTGGTGACAGACTTTCTATTTCATCGACTCCAGAGCAAGGTCAACCTGTTGGACGAGTAGCAAATATGTTCAACACTGAAATTGGATGTTTATCAAGGAGTTTCATCC
CCTTAAAGAAATTCATCCATTACGAGATTGGTAATAGATATAAAGATTGGAGATCAAGATTGCACCGATACTACAAAATGATCGGTGATCCAGAAGTAGCTCATACACGT
CCACACAAGGATGTTACTCAAGAAGATTGGAACATGTTGTGTGATAGATGGGCGACTCCAGAGTGGAAGGAACAAATGGTGGCATTATCTCAAGAGCAAGCTAGCTCAAG
TACACCTCTGAGCGATGAAGACATTATGGCCACTGTTCTTGGAACGAGATCGTCCTATGTCAAAGGAATGGGATATGGACCTAAACCACAACATCCTCAGAAGAAAGCAT
CTTACTCACAGGATCAACGAGAAGAAAATGCAAGAATGGAAGCAAAGATGAAAGAACAACTAGATCAAGTCATGGAAATGCAGCGGGATGAATATGAAAGAAGGTTTCGA
CAAATGGGTGAACTTATGGAAAGATTCACTGGAGCACACCCATCAATTAGTAAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCAAATAACGAAGTCAACACGGTAGACATGGATGAGGCATCCTCTCACAGTTCCCGAGTTCGTGGCGTTTCCCATGGGGTTGGTCTTGATAGGATTATTAAGGC
CATTGGTGACAGACTTTCTATTTCATCGACTCCAGAGCAAGGTCAACCTGTTGGACGAGTAGCAAATATGTTCAACACTGAAATTGGATGTTTATCAAGGAGTTTCATCC
CCTTAAAGAAATTCATCCATTACGAGATTGGTAATAGATATAAAGATTGGAGATCAAGATTGCACCGATACTACAAAATGATCGGTGATCCAGAAGTAGCTCATACACGT
CCACACAAGGATGTTACTCAAGAAGATTGGAACATGTTGTGTGATAGATGGGCGACTCCAGAGTGGAAGGAACAAATGGTGGCATTATCTCAAGAGCAAGCTAGCTCAAG
TACACCTCTGAGCGATGAAGACATTATGGCCACTGTTCTTGGAACGAGATCGTCCTATGTCAAAGGAATGGGATATGGACCTAAACCACAACATCCTCAGAAGAAAGCAT
CTTACTCACAGGATCAACGAGAAGAAAATGCAAGAATGGAAGCAAAGATGAAAGAACAACTAGATCAAGTCATGGAAATGCAGCGGGATGAATATGAAAGAAGGTTTCGA
CAAATGGGTGAACTTATGGAAAGATTCACTGGAGCACACCCATCAATTAGTAAGGATTAA
Protein sequenceShow/hide protein sequence
MLSNNEVNTVDMDEASSHSSRVRGVSHGVGLDRIIKAIGDRLSISSTPEQGQPVGRVANMFNTEIGCLSRSFIPLKKFIHYEIGNRYKDWRSRLHRYYKMIGDPEVAHTR
PHKDVTQEDWNMLCDRWATPEWKEQMVALSQEQASSSTPLSDEDIMATVLGTRSSYVKGMGYGPKPQHPQKKASYSQDQREENARMEAKMKEQLDQVMEMQRDEYERRFR
QMGELMERFTGAHPSISKD