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Spg035563 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035563
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold3:2625685..2627500
RNA-Seq ExpressionSpg035563
SyntenySpg035563
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048575.1 uncharacterized protein E6C27_scaffold61G002130 [Cucumis melo var. makuwa]1.3e-2735.04Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI----------KVN
        M EGY FSL VP+L NIY GL QI+ ++ S G S ACFP+HYV+ WLA YFNT Y     +R P MVEFS EGG KY+ + EA + I          +  
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI----------KVN

Query:  MYRGRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPSF----------------VSPDVFYSVVARVDNSKAPMDRVVI
           G   LV +  P P + K P + G +N  K I +    K  S+  ++ + ++    +                + P     V++  +NSK P+   V+
Subjt:  MYRGRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPSF----------------VSPDVFYSVVARVDNSKAPMDRVVI

Query:  QSCHPVIDEIPGQKKTTTHAAASEISDYCANNVI
         +   V  E P + +     A S IS +CANN+I
Subjt:  QSCHPVIDEIPGQKKTTTHAAASEISDYCANNVI

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]3.6e-2543.53Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI--------KVNMY
        MA G  +SL VP+LANIYHGLG I KAS   GR +  FP+HYV+ WLA+YF T Y +P +VRGP M  FS EGG+ YF ++EAR  I          N+ 
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI--------KVNMY

Query:  R--------------GRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPS
                        R  LV+SAIP P +P+  K  G++ GGK IR+ E         +EV+ H S  S
Subjt:  R--------------GRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPS

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.5e-2353.91Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI-KVNMYR-GRDKL
        MAEGY FSL +P+LANIY GL QI+ ++ S G S  CFP+HYV+ WLA YFNT Y     +RGP MVEFS EGGAKY+ + EAR+ I K N  R GR   
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI-KVNMYR-GRDKL

Query:  VASAIPLPPKPKFPK
            +P     K PK
Subjt:  VASAIPLPPKPKFPK

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]1.5e-2360.87Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY
        MAEG  FSL +PILANIY GL QI+  + S G S ACFP+HYV+ WLA YFNT Y  P  +RGP MVEFS EGGAKY+ + EAR  I +  Y
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]3.1e-2460.87Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY
        MAEGY FSL VP+LANIY GL Q++ ++ S G S ACFP+HYV+ WLA YFNT Y  P  +RGP MVEFS EGGAKY+ + EAR  I    Y
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY

TrEMBL top hitse value%identityAlignment
A0A5A7U349 PMD domain-containing protein1.8e-2543.53Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI--------KVNMY
        MA G  +SL VP+LANIYHGLG I KAS   GR +  FP+HYV+ WLA+YF T Y +P +VRGP M  FS EGG+ YF ++EAR  I          N+ 
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI--------KVNMY

Query:  R--------------GRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPS
                        R  LV+SAIP P +P+  K  G++ GGK IR+ E         +EV+ H S  S
Subjt:  R--------------GRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPS

A0A5A7U4C3 Uncharacterized protein7.4e-2453.91Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI-KVNMYR-GRDKL
        MAEGY FSL +P+LANIY GL QI+ ++ S G S  CFP+HYV+ WLA YFNT Y     +RGP MVEFS EGGAKY+ + EAR+ I K N  R GR   
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI-KVNMYR-GRDKL

Query:  VASAIPLPPKPKFPK
            +P     K PK
Subjt:  VASAIPLPPKPKFPK

A0A5A7U4M3 Uncharacterized protein6.4e-2835.04Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI----------KVN
        M EGY FSL VP+L NIY GL QI+ ++ S G S ACFP+HYV+ WLA YFNT Y     +R P MVEFS EGG KY+ + EA + I          +  
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFI----------KVN

Query:  MYRGRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPSF----------------VSPDVFYSVVARVDNSKAPMDRVVI
           G   LV +  P P + K P + G +N  K I +    K  S+  ++ + ++    +                + P     V++  +NSK P+   V+
Subjt:  MYRGRDKLVASAIPLPPKPKFPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPSF----------------VSPDVFYSVVARVDNSKAPMDRVVI

Query:  QSCHPVIDEIPGQKKTTTHAAASEISDYCANNVI
         +   V  E P + +     A S IS +CANN+I
Subjt:  QSCHPVIDEIPGQKKTTTHAAASEISDYCANNVI

A0A5A7V0Y4 Uncharacterized protein7.4e-2460.87Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY
        MAEG  FSL +PILANIY GL QI+  + S G S ACFP+HYV+ WLA YFNT Y  P  +RGP MVEFS EGGAKY+ + EAR  I +  Y
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY

A0A5D3C9B7 Uncharacterized protein2.1e-2359.78Show/hide
Query:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY
        MAEG  FSL +P+LANIY GL QI+  + S G S ACFP+HYV+ WLA YFNT Y  P  +RGP MVEFS EGGAKY+ + EAR  I    Y
Subjt:  MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGGTTATGCTTTTAGTCTTGTTGTCCCAATTTTGGCTAATATCTATCATGGATTGGGCCAGATTTATAAAGCGTCTCCTTCGGCAGGACGTTCAGAGGCTTG
TTTTCCAGTGCATTATGTTTACGCTTGGCTTGCTTATTATTTTAACACGCGTTATGCAGTTCCAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCAGAGAGGGTG
GAGCTAAATACTTTGACGATTTTGAGGCTCGTGTATTCATAAAGGTAAATATGTATCGTGGCAGAGATAAATTGGTGGCTAGTGCTATTCCTCTTCCTCCCAAGCCGAAA
TTTCCCAAAAAGGTTGGTAATGACAACGGAGGCAAAAGGATTCGCATGTTTGAACCTGGTAAATTTCGTTCTAGGGATAATGATGAAGTTGAGGGGCATCATAGTCCTCC
TTCTTTTGTGAGTCCAGACGTTTTTTACTCTGTAGTTGCGCGTGTGGACAATTCTAAAGCGCCAATGGATAGAGTTGTGATTCAATCTTGTCATCCTGTAATTGATGAAA
TTCCTGGACAAAAGAAGACAACAACCCATGCAGCTGCGTCTGAGATCTCTGATTATTGTGCTAACAATGTGATTTCCAACTACAGGAAACAGAGTAAGAATCGCCAATTG
GAAGAGATTAAGTTTAGTTTGGAGAAGATACTATATAGTGAAAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATCTGCAAGCATTGCGAGAAGAAGAAGA
ATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTACGCGAGGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGC
GAGAAACTATAAGTAGTATTGAAGATGTCCCTGTTCTTACTGATGCTGATGCTAAAACTCTAACGATACTTCGTGGAATGTTGGAAGATGCACAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGGTTATGCTTTTAGTCTTGTTGTCCCAATTTTGGCTAATATCTATCATGGATTGGGCCAGATTTATAAAGCGTCTCCTTCGGCAGGACGTTCAGAGGCTTG
TTTTCCAGTGCATTATGTTTACGCTTGGCTTGCTTATTATTTTAACACGCGTTATGCAGTTCCAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCAGAGAGGGTG
GAGCTAAATACTTTGACGATTTTGAGGCTCGTGTATTCATAAAGGTAAATATGTATCGTGGCAGAGATAAATTGGTGGCTAGTGCTATTCCTCTTCCTCCCAAGCCGAAA
TTTCCCAAAAAGGTTGGTAATGACAACGGAGGCAAAAGGATTCGCATGTTTGAACCTGGTAAATTTCGTTCTAGGGATAATGATGAAGTTGAGGGGCATCATAGTCCTCC
TTCTTTTGTGAGTCCAGACGTTTTTTACTCTGTAGTTGCGCGTGTGGACAATTCTAAAGCGCCAATGGATAGAGTTGTGATTCAATCTTGTCATCCTGTAATTGATGAAA
TTCCTGGACAAAAGAAGACAACAACCCATGCAGCTGCGTCTGAGATCTCTGATTATTGTGCTAACAATGTGATTTCCAACTACAGGAAACAGAGTAAGAATCGCCAATTG
GAAGAGATTAAGTTTAGTTTGGAGAAGATACTATATAGTGAAAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATCTGCAAGCATTGCGAGAAGAAGAAGA
ATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTACGCGAGGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGC
GAGAAACTATAAGTAGTATTGAAGATGTCCCTGTTCTTACTGATGCTGATGCTAAAACTCTAACGATACTTCGTGGAATGTTGGAAGATGCACAAGAATAG
Protein sequenceShow/hide protein sequence
MAEGYAFSLVVPILANIYHGLGQIYKASPSAGRSEACFPVHYVYAWLAYYFNTRYAVPEKVRGPMMVEFSREGGAKYFDDFEARVFIKVNMYRGRDKLVASAIPLPPKPK
FPKKVGNDNGGKRIRMFEPGKFRSRDNDEVEGHHSPPSFVSPDVFYSVVARVDNSKAPMDRVVIQSCHPVIDEIPGQKKTTTHAAASEISDYCANNVISNYRKQSKNRQL
EEIKFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEAVKATRGEISKLIVEKEDLLKQHQLEASKLRETISSIEDVPVLTDADAKTLTILRGMLEDAQE