; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035593 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035593
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationscaffold3:1491953..1492390
RNA-Seq ExpressionSpg035593
SyntenySpg035593
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571715.1 hypothetical protein SDJN03_28443, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3069.11Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGIL
        M+G GGD +GG+IGRGGEA+G MLGRG +VG M+GRG        GRGG+ +G M GRGG+A+GGM GRGGE  GGM+GRGG E+G M+GRGGEAIGG+L
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGIL

Query:  GRGGEATGGMLGRGGEAVGGVIG
        GRGGEA GGMLGRGG+AVGG IG
Subjt:  GRGGEATGGMLGRGGEAVGGVIG

KAG7011439.1 hypothetical protein SDJN02_26344, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3069.11Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGIL
        M+G GGD +GG+IGRGGEA+G MLGRG +VG M+GRG        GRGG+ +G M GRGG+A+GGM GRGGE  GGM+GRGG E+G M+GRGGEAIGG+L
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGIL

Query:  GRGGEATGGMLGRGGEAVGGVIG
        GRGGEA GGMLGRGG+AVGG IG
Subjt:  GRGGEATGGMLGRGGEAVGGVIG

KAG7022577.1 hypothetical protein SDJN02_16311, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-2271.29Show/hide
Query:  IIGRGGEAVGEMLGRGDE-VGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATGGMLGRGGEAV
        ++GRGGEA GE LGRG + VGG+L   GRGGE VG  +GRGGEA+GG+LGRGGE  GGM+GRGGE  GGM GRGG+AIGG+LGRGGEATG + GRGG+AV
Subjt:  IIGRGGEAVGEMLGRGDE-VGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATGGMLGRGGEAV

Query:  G
        G
Subjt:  G

TYK13397.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa]3.5e-2360.48Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGD-EVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI
        +LGRGG+ +G +IGRGGEA+GE++GRG   +G +LGRG        GRGGE +G ++GRGGEA+G +LGRGGE  G +IGRGGE IG ++GRGGEA+G I
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGD-EVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI

Query:  LGRGGEATGGMLGRGGEAVGGVIG
        LGRGG+A G +LGRGGEA+G ++G
Subjt:  LGRGGEATGGMLGRGGEAVGGVIG

XP_016900727.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]3.1e-1955.47Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDE-VGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI
        +LGRGG+  G IIGRGGEA+GE+LGRG + +G +LGRG        GRGG+++G + GRGGEA+G + GRGGE  G ++GRGG+ IG ++GRGGEAIG I
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDE-VGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI

Query:  ----LGRGGEATGGMLGRGGEAVGGVIG
            +GRGG+A G + GRGG+A+G + G
Subjt:  ----LGRGGEATGGMLGRGGEAVGGVIG

TrEMBL top hitse value%identityAlignment
A0A0A0KHS4 Pollen coat oleosin-glycine rich protein5.6e-1954.84Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDE-VGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI
        +LGRGG+T+G  +GRGG+A+GE+ GRG   +G +LGRG        GRGG+ +G + GRGG A+G MLGRGGE  G  +GRGG+ IG + GRGG A+G I
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDE-VGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI

Query:  LGRGGEATGGMLGRGGEAVGGVIG
        LGRGGE  G  +GRGG+A+G + G
Subjt:  LGRGGEATGGMLGRGGEAVGGVIG

A0A1S4DXM4 glycine-rich cell wall structural protein 1-like1.5e-1955.47Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDE-VGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI
        +LGRGG+  G IIGRGGEA+GE+LGRG + +G +LGRG        GRGG+++G + GRGGEA+G + GRGGE  G ++GRGG+ IG ++GRGGEAIG I
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGDE-VGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI

Query:  ----LGRGGEATGGMLGRGGEAVGGVIG
            +GRGG+A G + GRGG+A+G + G
Subjt:  ----LGRGGEATGGMLGRGGEAVGGVIG

A0A5D3BMR9 Glycine-rich cell wall structural protein 1-like4.2e-1459.78Show/hide
Query:  VGGIIGRGGEAVGEMLGRGDEVGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATG
        +G I+GRGG+A+GE+LGRG E  G +   GRGG+++G + GRGGEA+G + GRGGE  G ++GRGG+ IG ++GRGGEAIG I GRGG+ATG
Subjt:  VGGIIGRGGEAVGEMLGRGDEVGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATG

A0A5D3CNE0 Glycine-rich cell wall structural protein 1.8-like1.7e-2360.48Show/hide
Query:  MLGRGGDTVGGIIGRGGEAVGEMLGRGD-EVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI
        +LGRGG+ +G +IGRGGEA+GE++GRG   +G +LGRG        GRGGE +G ++GRGGEA+G +LGRGGE  G +IGRGGE IG ++GRGGEA+G I
Subjt:  MLGRGGDTVGGIIGRGGEAVGEMLGRGD-EVGGMLGRG--------GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGI

Query:  LGRGGEATGGMLGRGGEAVGGVIG
        LGRGG+A G +LGRGGEA+G ++G
Subjt:  LGRGGEATGGMLGRGGEAVGGVIG

A0A6J8E196 Uncharacterized protein3.5e-1342.98Show/hide
Query:  GRGGDTVGGIIGR---GGEAVGEMLGRGDEVGGMLGRG-----GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGR
        G GG  + G++G+   GG+ +  ++G+G   GG  G+G     G+GG+ +  M+G+GG+ +GGM+G+GG+  GGM+G+GG+ +GGM+G+GG+ +GG+ G+
Subjt:  GRGGDTVGGIIGR---GGEAVGEMLGRGDEVGGMLGRG-----GRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGR

Query:  GGEATGGMLGRGGEAVGGVIG
        GG+  GGM G+GG+  GG++G
Subjt:  GGEATGGMLGRGGEAVGGVIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23450.1 unknown protein6.0e-0546.09Show/hide
Query:  LGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGE-EAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATG
        +G+GG  +GG IG+GG  +G  +G+G  +GG +G+GG  G   G   G+GG  IGG +G+GG    GG  G+GG  IGG +G+GG  IGG  G+GG   G
Subjt:  LGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGE-EAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATG

Query:  GMLGRGGEAVGGVIG
        G+ G GG   GG  G
Subjt:  GMLGRGGEAVGGVIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGACGAGGAGGTGACACCGTTGGTGGAATAATAGGACGAGGAGGTGAAGCTGTTGGTGAGATGTTGGGGCGAGGGGATGAAGTTGGCGGAATGCTGGGACGAGG
AGGACGAGGCGGCGAAGAAGTTGGTGTAATGGTGGGACGAGGTGGTGAAGCTATAGGTGGAATGTTGGGACGAGGAGGTGAAGAAGCGGGTGGAATGATAGGACGAGGTG
GCGAAGAAATTGGTGGAATGGTGGGACGAGGTGGTGAGGCTATTGGTGGAATACTTGGACGAGGTGGCGAAGCGACCGGTGGAATGCTGGGACGAGGTGGCGAAGCTGTT
GGTGGAGTGATAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGACGAGGAGGTGACACCGTTGGTGGAATAATAGGACGAGGAGGTGAAGCTGTTGGTGAGATGTTGGGGCGAGGGGATGAAGTTGGCGGAATGCTGGGACGAGG
AGGACGAGGCGGCGAAGAAGTTGGTGTAATGGTGGGACGAGGTGGTGAAGCTATAGGTGGAATGTTGGGACGAGGAGGTGAAGAAGCGGGTGGAATGATAGGACGAGGTG
GCGAAGAAATTGGTGGAATGGTGGGACGAGGTGGTGAGGCTATTGGTGGAATACTTGGACGAGGTGGCGAAGCGACCGGTGGAATGCTGGGACGAGGTGGCGAAGCTGTT
GGTGGAGTGATAGGATGA
Protein sequenceShow/hide protein sequence
MLGRGGDTVGGIIGRGGEAVGEMLGRGDEVGGMLGRGGRGGEEVGVMVGRGGEAIGGMLGRGGEEAGGMIGRGGEEIGGMVGRGGEAIGGILGRGGEATGGMLGRGGEAV
GGVIG