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Spg035678 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035678
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein
Genome locationscaffold11:21882683..21886133
RNA-Seq ExpressionSpg035678
SyntenySpg035678
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.2e-1581.03Show/hide
Query:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        YI LLTLSVLRDN+ VVS  R PL  KDDGSAGR PLHRRTSKRWLYWACPTQR  VM
Subjt:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]2.8e-1583.64Show/hide
Query:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        L TLSVLRDNDAVVSAG  P +DKDDG+A RAPLHRRTSKRWLYWACPT R+SVM
Subjt:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]2.8e-1583.64Show/hide
Query:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        L TLSVLRDNDAVVSAG  P +DKDDG+A RAPLHRRTSKRWLYWACPT R+SVM
Subjt:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]5.4e-1475.86Show/hide
Query:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        YI LLTLSVLRDN+ ++S  R PL  KDDGSAGR PLHRRTSKRWLYWAC TQR  VM
Subjt:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

TrEMBL top hitse value%identityAlignment
A0A5A7TCY8 DNA/RNA polymerases superfamily protein1.1e-1581.03Show/hide
Query:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        YI LLTLSVLRDN+ VVS  R PL  KDDGSAGR PLHRRTSKRWLYWACPTQR  VM
Subjt:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

A0A5A7VGQ5 Uncharacterized protein1.4e-1583.64Show/hide
Query:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        L TLSVLRDNDAVVSAG  P +DKDDG+A RAPLHRRTSKRWLYWACPT R+SVM
Subjt:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

A0A5D3BG85 Uncharacterized protein1.4e-1583.64Show/hide
Query:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        L TLSVLRDNDAVVSAG  P +DKDDG+A RAPLHRRTSKRWLYWACPT R+SVM
Subjt:  LLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein2.6e-1475.86Show/hide
Query:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM
        YI LLTLSVLRDN+ ++S  R PL  KDDGSAGR PLHRRTSKRWLYWAC TQR  VM
Subjt:  YILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGTGCAAACCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTTTGGGGTGTACAAGTTGACTCAGAAGC
TCTATTTGTTTATATTCTGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATGACAAAGACGATGGGAGTGCTGGGC
GGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGTCCTACACAACGTAAATCGGTCATGTTCAACGTTTCAGGAGGGTCAACGGAAAAACAGAGG
AAAAGCTGGAATTCCCCAGAAATGCGACTGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCGTGCGCGGGTCGTTGT
TGACGAGTCTTCTTCGCACCTAACCGGTTGTTTTGCCCCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGTAGCTCCTCAACCAATTTCTACACTATATAAGCTCG
AGATTCGTAGTCAAATCCAAACAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACACCAATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGTGCAAACCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTTTGGGGTGTACAAGTTGACTCAGAAGC
TCTATTTGTTTATATTCTGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATGACAAAGACGATGGGAGTGCTGGGC
GGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGTCCTACACAACGTAAATCGGTCATGTTCAACGTTTCAGGAGGGTCAACGGAAAAACAGAGG
AAAAGCTGGAATTCCCCAGAAATGCGACTGCATTTCTGGGAAGGCAAAATGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCGTGCGCGGGTCGTTGT
TGACGAGTCTTCTTCGCACCTAACCGGTTGTTTTGCCCCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGTAGCTCCTCAACCAATTTCTACACTATATAAGCTCG
AGATTCGTAGTCAAATCCAAACAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACACCAATGAGTAG
Protein sequenceShow/hide protein sequence
MVFEMENRAQDFRANQEDLWFSLVFRAFWGVQVDSEALFVYILLLTLSVLRDNDAVVSAGRAPLHDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVMFNVSGGSTEKQR
KSWNSPEMRLHFWEGKMKCDRISGKTEVVPSRARVVVDESSSHLTGCFAPKLTGQPSSTYFVAPQPISTLYKLEIRSQIQTELTWKKRVVTEPWLDTNE