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Spg035713 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035713
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold11:21210904..21212893
RNA-Seq ExpressionSpg035713
SyntenySpg035713
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.6e-1051.95Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRDR---APGARYTEGQQVSLEKDDVRWLHAIFRTKLAGGLGGGVTTS
        MGVLG   YIV LVNVGCTG ALHNE+ SC  R      +R  + +Q+ +++ DV  LH +FR+KL G  G GVT S
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRDR---APGARYTEGQQVSLEKDDVRWLHAIFRTKLAGGLGGGVTTS

TYK02142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.0e-0749.33Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRD-----------RAPGARYTEGQQVSLEKDDVRWLHAIFRTKLA
        MGVL GP+YIV LVNVGCTG ALHN + SC+            +AP    +  +QV LE+ D   LHA+F+ KLA
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRD-----------RAPGARYTEGQQVSLEKDDVRWLHAIFRTKLA

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]9.8e-1040.74Show/hide
Query:  GVLGGPHYIVGLVNVGCTGRALHNEERSCR------DRAPGARYTEGQQVS-------------------------------LEKDDVRWLHAIFRTKLA
        GV GGPHYIVGLVNVGCTGR LH+ +RS        D  P +  + G   S                               + ++DV WLHA+FR K+A
Subjt:  GVLGGPHYIVGLVNVGCTGRALHNEERSCR------DRAPGARYTEGQQVS-------------------------------LEKDDVRWLHAIFRTKLA

Query:  GGLGGGVT
        GG GGGVT
Subjt:  GGLGGGVT

TrEMBL top hitse value%identityAlignment
A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-1051.95Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRDR---APGARYTEGQQVSLEKDDVRWLHAIFRTKLAGGLGGGVTTS
        MGVLG   YIV LVNVGCTG ALHNE+ SC  R      +R  + +Q+ +++ DV  LH +FR+KL G  G GVT S
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRDR---APGARYTEGQQVSLEKDDVRWLHAIFRTKLAGGLGGGVTTS

A0A5D3BTL2 CACTA en-spm transposon protein9.9e-0849.33Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRD-----------RAPGARYTEGQQVSLEKDDVRWLHAIFRTKLA
        MGVL GP+YIV LVNVGCTG ALHN + SC+            +AP    +  +QV LE+ D   LHA+F+ KLA
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNEERSCRD-----------RAPGARYTEGQQVSLEKDDVRWLHAIFRTKLA

A0A5D3CAC6 Uncharacterized protein4.8e-1040.74Show/hide
Query:  GVLGGPHYIVGLVNVGCTGRALHNEERSCR------DRAPGARYTEGQQVS-------------------------------LEKDDVRWLHAIFRTKLA
        GV GGPHYIVGLVNVGCTGR LH+ +RS        D  P +  + G   S                               + ++DV WLHA+FR K+A
Subjt:  GVLGGPHYIVGLVNVGCTGRALHNEERSCR------DRAPGARYTEGQQVS-------------------------------LEKDDVRWLHAIFRTKLA

Query:  GGLGGGVT
        GG GGGVT
Subjt:  GGLGGGVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTAGGTTGTACTGGGCGTGCCCTACACAACGAAGAACGGTCTTGTAGAGATCGAGCTCCTGGTGC
CAGATACACTGAGGGTCAACAGGTATCGTTAGAGAAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGCGGGGGTGTGACAACAA
GTGCAATACTTGTGGTGGTGTTCGTGCAGAAAGTTGCAGCAAAAAGGATCTCATTAGCTTGCTGTATTTTCCTGAGATTTGGTGATTTTCGATCAAGAACGTCCACGAAA
ACGCAACAGCGTCGGGTCGCTTGGCTTTGCTCGTCTCGACACTGTCGCGATTTCACGCTACGGATGGTTGAAATCGCGCCAGCATTGGGACGCTGTTCCTTAAGCATCTC
GACTCTGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTAGGTTGTACTGGGCGTGCCCTACACAACGAAGAACGGTCTTGTAGAGATCGAGCTCCTGGTGC
CAGATACACTGAGGGTCAACAGGTATCGTTAGAGAAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGCGGGGGTGTGACAACAA
GTGCAATACTTGTGGTGGTGTTCGTGCAGAAAGTTGCAGCAAAAAGGATCTCATTAGCTTGCTGTATTTTCCTGAGATTTGGTGATTTTCGATCAAGAACGTCCACGAAA
ACGCAACAGCGTCGGGTCGCTTGGCTTTGCTCGTCTCGACACTGTCGCGATTTCACGCTACGGATGGTTGAAATCGCGCCAGCATTGGGACGCTGTTCCTTAAGCATCTC
GACTCTGTCGTGA
Protein sequenceShow/hide protein sequence
MGVLGGPHYIVGLVNVGCTGRALHNEERSCRDRAPGARYTEGQQVSLEKDDVRWLHAIFRTKLAGGLGGGVTTSAILVVVFVQKVAAKRISLACCIFLRFGDFRSRTSTK
TQQRRVAWLCSSRHCRDFTLRMVEIAPALGRCSLSISTLS