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Spg035718 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035718
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold11:20101882..20102550
RNA-Seq ExpressionSpg035718
SyntenySpg035718
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042499.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.0e-0448.57Show/hide
Query:  PATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKA
        P ++ SST DTSDG+S   R  RGY RN+ LD HV R+GRIPI       S+ F    DV E AK+ V++
Subjt:  PATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKA

KAA0046250.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.0e-0430.66Show/hide
Query:  SSTGDTSDGTS----RTLRNKRGYGRNLLLDNHVTRYGRIPITID----------------------QESFSVRFNTWDDVTEEAKNLVKARL----LID
        SS GD + G+S         +R   R L L+ HV   GRIP+TI                       Q++F VR   W DV  E   +VK  L    ++D
Subjt:  SSTGDTSDGTS----RTLRNKRGYGRNLLLDNHVTRYGRIPITID----------------------QESFSVRFNTWDDVTEEAKNLVKARL----LID

Query:  LNLPAIVRFIDCTMMNSFKEYKGNYLDITKPSRLPNR
         N  A+ RF++  M+ +FKE++ +++DI+K +    R
Subjt:  LNLPAIVRFIDCTMMNSFKEYKGNYLDITKPSRLPNR

XP_038896646.1 LOW QUALITY PROTEIN: 12-oxophytodienoate reductase 1-like [Benincasa hispida]3.5e-0431.15Show/hide
Query:  SSSHIHDEADGEYVEVPTVPATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKARLL----IDLN
        S+ +   EAD E+ E         SS GDTSD +S + R KR + RN+ L+ +V ++             VR  T+ +V  +   L K++LL    +DL+
Subjt:  SSSHIHDEADGEYVEVPTVPATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKARLL----IDLN

Query:  LPAIVRFIDCTMMNSFKEYKGN
           +  F++  M NSFKE++ +
Subjt:  LPAIVRFIDCTMMNSFKEYKGN

XP_038902987.1 uncharacterized protein LOC120089695 [Benincasa hispida]2.4e-0533.58Show/hide
Query:  EADGEYVEVPTVPATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQ------ESFSVRFN----------------TWDDVTEEAKN
        EAD E+ E+       +SS GDTSD +S + R KR + RN+ L+ +V ++G I I I++         SVRF+                T+ +V  E   
Subjt:  EADGEYVEVPTVPATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQ------ESFSVRFN----------------TWDDVTEEAKN

Query:  LVKARLL----IDLNLPAIVRFIDCTMMNSFKEYKGN
        L K +LL    +DL+   + RFI+  M NSFKE++ +
Subjt:  LVKARLL----IDLNLPAIVRFIDCTMMNSFKEYKGN

TrEMBL top hitse value%identityAlignment
A0A5A7TMA0 CACTA en-spm transposon protein9.9e-0548.57Show/hide
Query:  PATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKA
        P ++ SST DTSDG+S   R  RGY RN+ LD HV R+GRIPI       S+ F    DV E AK+ V++
Subjt:  PATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKA

A0A5A7TSX8 CACTA en-spm transposon protein9.9e-0530.66Show/hide
Query:  SSTGDTSDGTS----RTLRNKRGYGRNLLLDNHVTRYGRIPITID----------------------QESFSVRFNTWDDVTEEAKNLVKARL----LID
        SS GD + G+S         +R   R L L+ HV   GRIP+TI                       Q++F VR   W DV  E   +VK  L    ++D
Subjt:  SSTGDTSDGTS----RTLRNKRGYGRNLLLDNHVTRYGRIPITID----------------------QESFSVRFNTWDDVTEEAKNLVKARL----LID

Query:  LNLPAIVRFIDCTMMNSFKEYKGNYLDITKPSRLPNR
         N  A+ RF++  M+ +FKE++ +++DI+K +    R
Subjt:  LNLPAIVRFIDCTMMNSFKEYKGNYLDITKPSRLPNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATACGATGTCATCATCATCATCACACATACACGACGAGGCTGATGGAGAGTACGTCGAGGTGCCGACCGTCCCTGCGACCTTACTATCTTCCACGGGGGATACGTCAGA
TGGTACATCCAGGACTTTGAGGAACAAGCGTGGCTATGGACGGAATCTTCTCTTGGACAATCATGTCACGAGATATGGGAGAATTCCGATTACAATCGATCAAGAGTCTT
TCTCTGTTCGATTCAACACATGGGATGATGTAACTGAAGAGGCTAAGAACCTAGTAAAGGCTCGACTACTGATTGATCTGAATTTACCTGCAATTGTGCGCTTTATAGAT
TGCACAATGATGAACTCATTTAAGGAGTACAAGGGGAATTATCTAGACATTACAAAGCCTTCGAGACTCCCGAACAGGCACGAGAGAATCCACATGATCGATTGA
mRNA sequenceShow/hide mRNA sequence
TATACGATGTCATCATCATCATCACACATACACGACGAGGCTGATGGAGAGTACGTCGAGGTGCCGACCGTCCCTGCGACCTTACTATCTTCCACGGGGGATACGTCAGA
TGGTACATCCAGGACTTTGAGGAACAAGCGTGGCTATGGACGGAATCTTCTCTTGGACAATCATGTCACGAGATATGGGAGAATTCCGATTACAATCGATCAAGAGTCTT
TCTCTGTTCGATTCAACACATGGGATGATGTAACTGAAGAGGCTAAGAACCTAGTAAAGGCTCGACTACTGATTGATCTGAATTTACCTGCAATTGTGCGCTTTATAGAT
TGCACAATGATGAACTCATTTAAGGAGTACAAGGGGAATTATCTAGACATTACAAAGCCTTCGAGACTCCCGAACAGGCACGAGAGAATCCACATGATCGATTGA
Protein sequenceShow/hide protein sequence
YTMSSSSSHIHDEADGEYVEVPTVPATLLSSTGDTSDGTSRTLRNKRGYGRNLLLDNHVTRYGRIPITIDQESFSVRFNTWDDVTEEAKNLVKARLLIDLNLPAIVRFID
CTMMNSFKEYKGNYLDITKPSRLPNRHERIHMID