; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035731 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035731
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold11:20770836..20772923
RNA-Seq ExpressionSpg035731
SyntenySpg035731
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045180.1 uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]3.3e-0538.05Show/hide
Query:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI
        LSVLCDND VVSAGRA L ++  +  VEIEL          KV DQ PV+ +                              EG    +  DDV  +HA+
Subjt:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI

Query:  FLTKLAGGPGGGV
        F  K AG PGGGV
Subjt:  FLTKLAGGPGGGV

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]2.5e-0538.84Show/hide
Query:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD
        + S   LSVL DNDAVVSAG            RAPLHR+ SKR              LV+     ++  +  L VPD  P      E    S   +  DD
Subjt:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD

Query:  VRWLHAIFLTKLAGGPGGGVT
        V WLH +F  K  GGPGG VT
Subjt:  VRWLHAIFLTKLAGGPGGGVT

TYJ96574.1 uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa]7.3e-0535.96Show/hide
Query:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI
        LSVL DN+A                 VE+   CLIH QRLLKV DQ PV+ +                              +G    +  DDV WLHA+
Subjt:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI

Query:  FLTKLAGGPGGGVT
        F  K  GGPGGGVT
Subjt:  FLTKLAGGPGGGVT

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]2.5e-0538.84Show/hide
Query:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD
        + S   LSVL DNDAVVSAG            RAPLHR+ SKR              LV+     ++  +  L VPD  P      E    S   +  DD
Subjt:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD

Query:  VRWLHAIFLTKLAGGPGGGVT
        V WLH +F  K  GGPGG VT
Subjt:  VRWLHAIFLTKLAGGPGGGVT

TYK27372.1 uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]3.3e-0538.05Show/hide
Query:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI
        LSVLCDND VVSAGRA L ++  +  VEIEL          KV DQ PV+ +                              EG    +  DDV  +HA+
Subjt:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI

Query:  FLTKLAGGPGGGV
        F  K AG PGGGV
Subjt:  FLTKLAGGPGGGV

TrEMBL top hitse value%identityAlignment
A0A5A7TPS6 Retrotrans_gag domain-containing protein1.6e-0538.05Show/hide
Query:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI
        LSVLCDND VVSAGRA L ++  +  VEIEL          KV DQ PV+ +                              EG    +  DDV  +HA+
Subjt:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI

Query:  FLTKLAGGPGGGV
        F  K AG PGGGV
Subjt:  FLTKLAGGPGGGV

A0A5A7VGQ5 Uncharacterized protein1.2e-0538.84Show/hide
Query:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD
        + S   LSVL DNDAVVSAG            RAPLHR+ SKR              LV+     ++  +  L VPD  P      E    S   +  DD
Subjt:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD

Query:  VRWLHAIFLTKLAGGPGGGVT
        V WLH +F  K  GGPGG VT
Subjt:  VRWLHAIFLTKLAGGPGGGVT

A0A5D3BC77 CCHC-type domain-containing protein3.5e-0535.96Show/hide
Query:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI
        LSVL DN+A                 VE+   CLIH QRLLKV DQ PV+ +                              +G    +  DDV WLHA+
Subjt:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI

Query:  FLTKLAGGPGGGVT
        F  K  GGPGGGVT
Subjt:  FLTKLAGGPGGGVT

A0A5D3BG85 Uncharacterized protein1.2e-0538.84Show/hide
Query:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD
        + S   LSVL DNDAVVSAG            RAPLHR+ SKR              LV+     ++  +  L VPD  P      E    S   +  DD
Subjt:  KLSKLKLSVLCDNDAVVSAG------------RAPLHRKASKR--------------LVEIELRCLIHYQRLLKVPDQAPVQ-HFQEGQQVS---LEEDD

Query:  VRWLHAIFLTKLAGGPGGGVT
        V WLH +F  K  GGPGG VT
Subjt:  VRWLHAIFLTKLAGGPGGGVT

A0A5D3DV36 Retrotrans_gag domain-containing protein1.6e-0538.05Show/hide
Query:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI
        LSVLCDND VVSAGRA L ++  +  VEIEL          KV DQ PV+ +                              EG    +  DDV  +HA+
Subjt:  LSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQAPVQHFQ-----------------------------EGQQVSLEEDDVRWLHAI

Query:  FLTKLAGGPGGGV
        F  K AG PGGGV
Subjt:  FLTKLAGGPGGGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTCTGAGCTACACAAGAAGAGCTAAGAGGAGAAAGATAAAGAGTAGCAGAAAACCTCGAATCTG
TGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGCTGGGAATCGCGTTTTCATTTCTTCAGCAAGCTAAGTAAGCTTAAGTTGAGTGTACTCTGTGACAATGATGCTG
TCGTAAGTGCTGGGCGGGCCCCACTACATCGTAAAGCTAGTAAACGGTTGGTTGAGATCGAGCTCCGGTGTCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAA
GCTCCAGTTCAACATTTTCAGGAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCTGACTAAGCTAGCAGGTGGTCCAGGAGGGGG
TGTGACACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTCTGAGCTACACAAGAAGAGCTAAGAGGAGAAAGATAAAGAGTAGCAGAAAACCTCGAATCTG
TGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGCTGGGAATCGCGTTTTCATTTCTTCAGCAAGCTAAGTAAGCTTAAGTTGAGTGTACTCTGTGACAATGATGCTG
TCGTAAGTGCTGGGCGGGCCCCACTACATCGTAAAGCTAGTAAACGGTTGGTTGAGATCGAGCTCCGGTGTCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAA
GCTCCAGTTCAACATTTTCAGGAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCTGACTAAGCTAGCAGGTGGTCCAGGAGGGGG
TGTGACACAATAA
Protein sequenceShow/hide protein sequence
MAESGFNLPISGFLFGLSYTRRAKRRKIKSSRKPRICVVCVRGISGQIGWESRFHFFSKLSKLKLSVLCDNDAVVSAGRAPLHRKASKRLVEIELRCLIHYQRLLKVPDQ
APVQHFQEGQQVSLEEDDVRWLHAIFLTKLAGGPGGGVTQ