; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035735 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035735
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationscaffold11:20280794..20286127
RNA-Seq ExpressionSpg035735
SyntenySpg035735
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006887 - exocytosis (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0005802 - trans-Golgi network (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0009504 - cell plate (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsIPR006011 - Syntaxin, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018148.1 putative syntaxin [Cucurbita argyrosperma subsp. argyrosperma]7.2e-3089.74Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIELGTN  TSAGDLGL+DFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

XP_022930594.1 syntaxin-132-like [Cucurbita moschata]7.2e-3089.74Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIELGTN  TSAGDLGL+DFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

XP_022980674.1 syntaxin-132-like [Cucurbita maxima]7.2e-3089.74Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIELGTN  TSAGDLGL+DFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

XP_038695044.1 syntaxin-132-like [Tripterygium wilfordii]1.3e-2679.49Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIE+GTN   ++GDLGLEDFFKKVQ+IEKQNEKLD+LL+KLQD+HE+SKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

XP_038725744.1 syntaxin-132-like [Tripterygium wilfordii]2.4e-2576.92Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSR GDIE+G N   ++GDLGLEDFFKKVQ+IEKQNEKLD+LL+KLQD+HE+SKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

TrEMBL top hitse value%identityAlignment
A0A0A0LFM0 SynN domain-containing protein5.8e-2580.77Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEI RGQPS G DIELG N  TSAGD G+ DFFKKVQ+IEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

A0A1S3CPB6 syntaxin-1329.8e-2580.77Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIELGTN   + GD G+ DFFKKVQ+IEKQNEKLD LLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

A0A6J1ERW7 syntaxin-132-like3.5e-3089.74Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIELGTN  TSAGDLGL+DFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

A0A6J1IZY0 syntaxin-132-like3.5e-3089.74Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSRGGDIELGTN  TSAGDLGL+DFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

A0A7J6FCY3 t-SNARE coiled-coil homology domain-containing protein7.5e-2578.21Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++L DSFEIPRGQPSR GDIELGT    + GD GLE FFKKVQ+IEKQNEKLD+LLRKLQD+HEESKAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

SwissProt top hitse value%identityAlignment
Q8VZU2 Syntaxin-1324.9e-2167.95Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++LK SFE+PRGQ SR GD+ELG       GD GLEDFFKKVQ I+KQ +KLD+LL+KLQ SHEESK+VTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

Q9SRV7 Putative syntaxin-1311.2e-1460.26Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++LK S E  R + +R  DIE G     S GDLGL  FFKKVQ+IEKQ EKLD+ L KLQ +HEE+KAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

Arabidopsis top hitse value%identityAlignment
AT3G03800.1 syntaxin of plants 1318.2e-1660.26Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++LK S E  R + +R  DIE G     S GDLGL  FFKKVQ+IEKQ EKLD+ L KLQ +HEE+KAVTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

AT3G11820.1 syntaxin of plants 1211.9e-0435.82Show/hide
Query:  PRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        PR   + GGD     N   S G + L+ FF+ V+ ++++ ++LDRL   L   HE+SK +  A A+K
Subjt:  PRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

AT5G08080.1 syntaxin of plants 1323.5e-2267.95Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++LK SFE+PRGQ SR GD+ELG       GD GLEDFFKKVQ I+KQ +KLD+LL+KLQ SHEESK+VTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

AT5G08080.2 syntaxin of plants 1323.5e-2267.95Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK
        ++++LK SFE+PRGQ SR GD+ELG       GD GLEDFFKKVQ I+KQ +KLD+LL+KLQ SHEESK+VTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMK

AT5G08080.3 syntaxin of plants 1321.2e-1959.55Show/hide
Query:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQ-----------DSHEESKAVTKAPAMK
        ++++LK SFE+PRGQ SR GD+ELG       GD GLEDFFKKVQ I+KQ +KLD+LL+KLQ            SHEESK+VTKAPAMK
Subjt:  LDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQ-----------DSHEESKAVTKAPAMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGATAATGTTTTGAAGGATTCCTTTGAGATCCCTCGGGGTCAACCTTCTAGAGGAGGAGACATTGAGCTAGGAACAAATACTCGTACTAGTGCAGGGGATCT
GGGCTTGGAGGATTTTTTCAAAAAGGTTCAAGATATTGAAAAGCAGAATGAGAAGCTGGATAGGCTACTGAGAAAGCTCCAGGATTCACATGAGGAGTCCAAAGCTGTGA
CTAAAGCTCCAGCAATGAAAGGCGCATTGTTGTGCAATATATTTGCATTAAACATATCAAGTTCTGATTCCATAACGGTTTACTTCTCTGTTATAGAAGGAGCTCCCCTT
CATCTTCATTTGGGATTCTGTCATGCTTTGTCCGATAGGGAAGCGACGGATGTCATGACTCTTCTTTCCTTGATCGAGGAGTTTGAGTTTAGATTGGGGAGGAGAGATAT
TCGTTGTTGGAGCCCTAATCCTTCTGAGGGGTTCTCGTGTAAATCCTACTTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTGATAATGTTTTGAAGGATTCCTTTGAGATCCCTCGGGGTCAACCTTCTAGAGGAGGAGACATTGAGCTAGGAACAAATACTCGTACTAGTGCAGGGGATCT
GGGCTTGGAGGATTTTTTCAAAAAGGTTCAAGATATTGAAAAGCAGAATGAGAAGCTGGATAGGCTACTGAGAAAGCTCCAGGATTCACATGAGGAGTCCAAAGCTGTGA
CTAAAGCTCCAGCAATGAAAGGCGCATTGTTGTGCAATATATTTGCATTAAACATATCAAGTTCTGATTCCATAACGGTTTACTTCTCTGTTATAGAAGGAGCTCCCCTT
CATCTTCATTTGGGATTCTGTCATGCTTTGTCCGATAGGGAAGCGACGGATGTCATGACTCTTCTTTCCTTGATCGAGGAGTTTGAGTTTAGATTGGGGAGGAGAGATAT
TCGTTGTTGGAGCCCTAATCCTTCTGAGGGGTTCTCGTGTAAATCCTACTTTGCTTAG
Protein sequenceShow/hide protein sequence
MALDNVLKDSFEIPRGQPSRGGDIELGTNTRTSAGDLGLEDFFKKVQDIEKQNEKLDRLLRKLQDSHEESKAVTKAPAMKGALLCNIFALNISSSDSITVYFSVIEGAPL
HLHLGFCHALSDREATDVMTLLSLIEEFEFRLGRRDIRCWSPNPSEGFSCKSYFA