; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035739 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035739
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4219 domain-containing protein
Genome locationscaffold11:20916522..20918500
RNA-Seq ExpressionSpg035739
SyntenySpg035739
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.4e-2837.55Show/hide
Query:  EKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEKNT
        E +  +  +L LM  S+   +    +DE+  + PS +EL++ FE++Q+DLEK+SSKYV L KKY  LS ENKSL+D+  C K                  
Subjt:  EKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEKNT

Query:  LIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLAS
                                        N++IE  ++     I                   EK + +DK++FLE D+ EK+NL+ VLKE E+   
Subjt:  LIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLAS

Query:  KELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSISK
        ++L+ AK++IKKLTIGAQRLDKIIEVGK +GDKR LGYIDE ST SS ++  K
Subjt:  KELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSISK

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.1e-1764.2Show/hide
Query:  EKISFIDKIKFLECDNYEKNNLLHVLKEKEMLASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS
        EK + +DK++FLE D  EK+NL+ VLKE E+   ++L+ AK++IKKLTI AQRL +IIEVGK +GDKRGLGYIDE STPSS
Subjt:  EKISFIDKIKFLECDNYEKNNLLHVLKEKEMLASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]6.4e-2133.6Show/hide
Query:  GVEKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEK
        G E +  +  + C MAHS+   +    +DE+N    SYDEL++ FE+MQ++LEK+ SKYV L  K    + ENKSL D+  CLK                
Subjt:  GVEKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEK

Query:  NTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEML
                                                            KNE                             ++ +NL+ +LK+ E  
Subjt:  NTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEML

Query:  ASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSI
        A  EL+ AKD IK+LTIGAQRLDKIIE GKP+GDKRGLGYI+EC+TPSS  +I
Subjt:  ASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSI

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]1.7e-1391.3Show/hide
Query:  ELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS
        EL+ AKDSIKKLTIGAQRLDKIIE+GKP+GDKRGLGYIDECSTPSS
Subjt:  ELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]5.2e-3140.49Show/hide
Query:  EKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEKNT
        E +  +  +L LMAHS+   +    +D++  +  S DEL++ FESMQ+DLEK+SSKYV L KKY  L  ENKSL+D   C                    
Subjt:  EKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEKNT

Query:  LIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLAS
                                      KENE  E               E+ +    +  +EK+  + +DK++FLE D+ EK+NL+ VLKE E+   
Subjt:  LIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLAS

Query:  KELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS
        +EL+ AK++IKKLTIGAQRLDKIIEVGK +GDKRGLGYIDE STPSS
Subjt:  KELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS

TrEMBL top hitse value%identityAlignment
A0A1Q3BYT7 DUF4219 domain-containing protein2.0e-1227.84Show/hide
Query:  PPLFDGKKYDVWSHRMKTFLLAIDFDIL------------YVCENDLSKSKLNDEMLSLNARAINIICCALDKNICDKISHFTYAYDIWKFLDDVYSVKN
        PP FDG  Y+ W  +M TF+ ++D+D+             Y+ +  +  ++   EML LNA+A +I+ CAL  N  D+IS    A +IW  L+D +  KN
Subjt:  PPLFDGKKYDVWSHRMKTFLLAIDFDIL------------YVCENDLSKSKLNDEMLSLNARAINIICCALDKNICDKISHFTYAYDIWKFLDDVYSVKN

Query:  SPCTSNDLFDVKENCNSQNQEKIHGVEKQKYDGCSLCLMAHSNDGSDVEIDEDEIN----RKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIE
                                       +G + CLMA   D S  E  E+E+N        +Y++LYD +E+    ++ +    + L+K+ + L  E
Subjt:  SPCTSNDLFDVKENCNSQNQEKIHGVEKQKYDGCSLCLMAHSNDGSDVEIDEDEIN----RKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIE

Query:  NKSLIDENTCLKNRATNDVLHDDCCDEKNTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLEL
        N   ++E   LK++ +  +   D  +  + L   I SLE ENE       +LKIE++ L+K      + S +L
Subjt:  NKSLIDENTCLKNRATNDVLHDDCCDEKNTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLEL

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein6.9e-2937.55Show/hide
Query:  EKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEKNT
        E +  +  +L LM  S+   +    +DE+  + PS +EL++ FE++Q+DLEK+SSKYV L KKY  LS ENKSL+D+  C K                  
Subjt:  EKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEKNT

Query:  LIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLAS
                                        N++IE  ++     I                   EK + +DK++FLE D+ EK+NL+ VLKE E+   
Subjt:  LIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLAS

Query:  KELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSISK
        ++L+ AK++IKKLTIGAQRLDKIIEVGK +GDKR LGYIDE ST SS ++  K
Subjt:  KELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSISK

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein5.5e-1864.2Show/hide
Query:  EKISFIDKIKFLECDNYEKNNLLHVLKEKEMLASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS
        EK + +DK++FLE D  EK+NL+ VLKE E+   ++L+ AK++IKKLTI AQRL +IIEVGK +GDKRGLGYIDE STPSS
Subjt:  EKISFIDKIKFLECDNYEKNNLLHVLKEKEMLASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS

A0A6J1DS74 uncharacterized protein LOC1110238063.1e-2133.6Show/hide
Query:  GVEKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEK
        G E +  +  + C MAHS+   +    +DE+N    SYDEL++ FE+MQ++LEK+ SKYV L  K    + ENKSL D+  CLK                
Subjt:  GVEKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHDDCCDEK

Query:  NTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEML
                                                            KNE                             ++ +NL+ +LK+ E  
Subjt:  NTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEML

Query:  ASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSI
        A  EL+ AKD IK+LTIGAQRLDKIIE GKP+GDKRGLGYI+EC+TPSS  +I
Subjt:  ASKELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSI

A0A6J1DY46 uncharacterized protein LOC1110252598.1e-1491.3Show/hide
Query:  ELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS
        EL+ AKDSIKKLTIGAQRLDKIIE+GKP+GDKRGLGYIDECSTPSS
Subjt:  ELEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTTTAGATTTTATGGAAAGTTTTTGTATTGATAAACCTCCATTGTTTGATGGTAAAAAGTATGATGTTTGGAGCCATAGAATGAAAACGTTTTTGCTTGCTAT
TGATTTTGATATTTTGTATGTTTGTGAAAATGATTTATCAAAATCAAAATTGAATGATGAAATGCTTTCTTTAAATGCTCGAGCTATAAATATCATATGTTGTGCGTTAG
ATAAAAATATATGTGATAAAATTTCACATTTTACATATGCATATGATATTTGGAAATTTCTTGATGATGTTTATAGTGTTAAAAATTCTCCTTGTACTTCTAATGATTTA
TTTGATGTGAAGGAGAATTGCAATTCTCAAAATCAAGAAAAAATTCATGGAGTAGAAAAACAAAAATATGATGGATGTTCCTTATGCTTGATGGCTCATTCGAATGATGG
GAGCGATGTTGAAATCGATGAGGATGAGATAAATCGAAAATCCCCTTCATATGATGAATTATATGATGTTTTTGAAAGTATGCAACATGATTTAGAAAAGGTTAGCTCTA
AATATGTTAGGCTATCAAAGAAGTATAAAACATTATCCATAGAAAATAAATCTTTGATAGATGAAAATACTTGCTTGAAAAATAGAGCTACTAATGATGTTTTGCATGAT
GATTGTTGTGATGAGAAAAATACTTTGATTGATAAAATTCATTCTCTTGAAAAAGAAAATGAGGATCTCAAATCTTTGGCATGTGAATTAAAAATTGAATTGAATGATTT
GAGAAAAGAGAATGAGAAAATTGAATCTTTTTCTTTGGAATTAAAAGATAAAATTGCTAGTTTGAAAAATGAAATTGCTATTTTGGAAACTAGCAATACATCTTTAGAAA
AAGAGAAAATTTCCTTTATTGACAAAATTAAATTTCTTGAATGTGATAATTATGAGAAAAATAATCTTTTGCATGTGCTTAAAGAAAAAGAAATGCTTGCTAGTAAAGAG
CTTGAAATTGCAAAAGATTCCATTAAAAAGTTGACCATAGGAGCTCAAAGATTAGACAAGATAATTGAAGTAGGCAAGCCTTTCGGTGATAAAAGAGGTTTAGGCTATAT
TGATGAATGTTCTACTCCTTCAAGTGTGAGTTCAATAAGCAAGTGGTTGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTTTAGATTTTATGGAAAGTTTTTGTATTGATAAACCTCCATTGTTTGATGGTAAAAAGTATGATGTTTGGAGCCATAGAATGAAAACGTTTTTGCTTGCTAT
TGATTTTGATATTTTGTATGTTTGTGAAAATGATTTATCAAAATCAAAATTGAATGATGAAATGCTTTCTTTAAATGCTCGAGCTATAAATATCATATGTTGTGCGTTAG
ATAAAAATATATGTGATAAAATTTCACATTTTACATATGCATATGATATTTGGAAATTTCTTGATGATGTTTATAGTGTTAAAAATTCTCCTTGTACTTCTAATGATTTA
TTTGATGTGAAGGAGAATTGCAATTCTCAAAATCAAGAAAAAATTCATGGAGTAGAAAAACAAAAATATGATGGATGTTCCTTATGCTTGATGGCTCATTCGAATGATGG
GAGCGATGTTGAAATCGATGAGGATGAGATAAATCGAAAATCCCCTTCATATGATGAATTATATGATGTTTTTGAAAGTATGCAACATGATTTAGAAAAGGTTAGCTCTA
AATATGTTAGGCTATCAAAGAAGTATAAAACATTATCCATAGAAAATAAATCTTTGATAGATGAAAATACTTGCTTGAAAAATAGAGCTACTAATGATGTTTTGCATGAT
GATTGTTGTGATGAGAAAAATACTTTGATTGATAAAATTCATTCTCTTGAAAAAGAAAATGAGGATCTCAAATCTTTGGCATGTGAATTAAAAATTGAATTGAATGATTT
GAGAAAAGAGAATGAGAAAATTGAATCTTTTTCTTTGGAATTAAAAGATAAAATTGCTAGTTTGAAAAATGAAATTGCTATTTTGGAAACTAGCAATACATCTTTAGAAA
AAGAGAAAATTTCCTTTATTGACAAAATTAAATTTCTTGAATGTGATAATTATGAGAAAAATAATCTTTTGCATGTGCTTAAAGAAAAAGAAATGCTTGCTAGTAAAGAG
CTTGAAATTGCAAAAGATTCCATTAAAAAGTTGACCATAGGAGCTCAAAGATTAGACAAGATAATTGAAGTAGGCAAGCCTTTCGGTGATAAAAGAGGTTTAGGCTATAT
TGATGAATGTTCTACTCCTTCAAGTGTGAGTTCAATAAGCAAGTGGTTGCTTTAA
Protein sequenceShow/hide protein sequence
MTTLDFMESFCIDKPPLFDGKKYDVWSHRMKTFLLAIDFDILYVCENDLSKSKLNDEMLSLNARAINIICCALDKNICDKISHFTYAYDIWKFLDDVYSVKNSPCTSNDL
FDVKENCNSQNQEKIHGVEKQKYDGCSLCLMAHSNDGSDVEIDEDEINRKSPSYDELYDVFESMQHDLEKVSSKYVRLSKKYKTLSIENKSLIDENTCLKNRATNDVLHD
DCCDEKNTLIDKIHSLEKENEDLKSLACELKIELNDLRKENEKIESFSLELKDKIASLKNEIAILETSNTSLEKEKISFIDKIKFLECDNYEKNNLLHVLKEKEMLASKE
LEIAKDSIKKLTIGAQRLDKIIEVGKPFGDKRGLGYIDECSTPSSVSSISKWLL