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Spg035745 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035745
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold11:20581764..20583258
RNA-Seq ExpressionSpg035745
SyntenySpg035745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]4.8e-0436.25Show/hide
Query:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP
        V F    IN +Y +K   N  G+ +  NP A+ ++DAL+ +   G +W    T+   L P+DL  E ++WL FIK  +MP
Subjt:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.0e-0537.97Show/hide
Query:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLM
        VSFS+ DIN +Y++K      GN +I +P+ +QM+DAL+++   G++W  S   V +LA   L  E  +W+  +K RL+
Subjt:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLM

XP_038885414.1 nucleolar protein 58-like [Benincasa hispida]8.3e-0433.33Show/hide
Query:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIK
        V FS+ DIN +Y+++   +  G+ +I +P  + M+DALK++A  G++W  S   +++L    L PE  +W+  +K
Subjt:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIK

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.2e-0738.75Show/hide
Query:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP
        V FS+ DIN +Y++K  L+  GN +I +P    M+D L+++   G QW  S   +K+LA + L PE+ +W+  +K RL+P
Subjt:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]9.4e-0838.27Show/hide
Query:  MVSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP
        +V FS+ DIN +Y++K   +  GN +I +P  ++M+DAL+ +   G QW  S   +K+LA S L PE+ +W+  +K R++P
Subjt:  MVSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP

TrEMBL top hitse value%identityAlignment
A0A5D3CW17 Uncharacterized protein2.3e-0436.25Show/hide
Query:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP
        V F    IN +Y +K   N  G+ +  NP A+ ++DAL+ +   G +W    T+   L P+DL  E ++WL FIK  +MP
Subjt:  VSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGTTTCTCCTCAATCGACATTAATATGGTGTACAGGATTAAGGCGCCCCTGAATCCGAGAGGGAATGATGTAATAAGGAACCCTTCGGCCAAGCAGATGAAAGA
TGCATTGAAACTTGTGGCCAATAAGGGGGTTCAATGGAAAGAATCGCAGACGAAAGTGAAGTCTTTAGCGCCAAGCGACTTAAAGCCAGAATCGGCAATTTGGCTTAACT
TCATCAAAAATCGCTTGATGCCTGTTGGGCGATTATCCGATTACCGCAAGCGCACGGGTCGTCACAAGGAAGGAATTGACTGTCGAAGACCCCGTCGCTGGCGATTGGAG
TCCCTCCGAGCTTCCCTTGAGCCTGCTAGAGCTCGAAAATGGGGTAGCGTCGTGATGCTATTGGCACAGCGTCACGATGCTGTGACGTCATCGACTTGTCGGCCAAGAAA
TGCGACGCTGTCCCTACAGCGTCTCGACGCTAGGCGAATTCCTGAACTTTCTGCTGCGATTTTGGGCTTGAATTTGGGCCTCTCTTTATTTCCTTTGGACCTCATCTTCA
TGGTTGACCTTCATGGCTTCCCCCTTGACCCAAGCATGAAAATTGGGCTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGTTTCTCCTCAATCGACATTAATATGGTGTACAGGATTAAGGCGCCCCTGAATCCGAGAGGGAATGATGTAATAAGGAACCCTTCGGCCAAGCAGATGAAAGA
TGCATTGAAACTTGTGGCCAATAAGGGGGTTCAATGGAAAGAATCGCAGACGAAAGTGAAGTCTTTAGCGCCAAGCGACTTAAAGCCAGAATCGGCAATTTGGCTTAACT
TCATCAAAAATCGCTTGATGCCTGTTGGGCGATTATCCGATTACCGCAAGCGCACGGGTCGTCACAAGGAAGGAATTGACTGTCGAAGACCCCGTCGCTGGCGATTGGAG
TCCCTCCGAGCTTCCCTTGAGCCTGCTAGAGCTCGAAAATGGGGTAGCGTCGTGATGCTATTGGCACAGCGTCACGATGCTGTGACGTCATCGACTTGTCGGCCAAGAAA
TGCGACGCTGTCCCTACAGCGTCTCGACGCTAGGCGAATTCCTGAACTTTCTGCTGCGATTTTGGGCTTGAATTTGGGCCTCTCTTTATTTCCTTTGGACCTCATCTTCA
TGGTTGACCTTCATGGCTTCCCCCTTGACCCAAGCATGAAAATTGGGCTTAAATGA
Protein sequenceShow/hide protein sequence
MVSFSSIDINMVYRIKAPLNPRGNDVIRNPSAKQMKDALKLVANKGVQWKESQTKVKSLAPSDLKPESAIWLNFIKNRLMPVGRLSDYRKRTGRHKEGIDCRRPRRWRLE
SLRASLEPARARKWGSVVMLLAQRHDAVTSSTCRPRNATLSLQRLDARRIPELSAAILGLNLGLSLFPLDLIFMVDLHGFPLDPSMKIGLK