CuGenDBv2

Gene ID	Spg035770
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LEA_2 domain-containing protein
Genome location	scaffold5:38061494..38061925
RNA-Seq Expression	Spg035770
Synteny	Spg035770
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588521.1 hypothetical protein SDJN03_17086, partial [Cucurbita argyrosperma subsp. sororia]

7.1e-50

82.22

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LS+S HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P +P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

KAG7022372.1 hypothetical protein SDJN02_16103, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.3e-50

82.22

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LS+S HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P  P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

XP_022931679.1 uncharacterized protein LOC111437836 [Cucurbita moschata]

9.3e-50

82.22

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LS+S HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P  P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

XP_022969932.1 uncharacterized protein LOC111468981 [Cucurbita maxima]

3.2e-50

82.96

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LSSS HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P +P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

XP_023529478.1 uncharacterized protein LOC111792323 [Cucurbita pepo subsp. pepo]

9.3e-50

82.22

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LS+S HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P  P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BGU8 uncharacterized protein LOC103489700

1.6e-47

79.58

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Query:  NCNSLSSSGHR-----HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRM
        N +++SSS        HP YNPRSSSSS A+FKGCCCCLFLLFSFLALLVLAIVL+VVLALKPKKPQFDLQQV VQYM IT P    NPTTASLSLNIRM
Subjt:  NCNSLSSSGHR-----HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRM

Query:  IFTAINPNKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        IFTA+NPNKVGIKY ES FTVMYRGI LGRASV GF QDPHS
Subjt:  IFTAINPNKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

A0A5D3D361 Late embryogenesis abundant protein, LEA-14

1.6e-47

79.58

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Query:  NCNSLSSSGHR-----HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRM
        N +++SSS        HP YNPRSSSSS A+FKGCCCCLFLLFSFLALLVLAIVL+VVLALKPKKPQFDLQQV VQYM IT P    NPTTASLSLNIRM
Subjt:  NCNSLSSSGHR-----HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRM

Query:  IFTAINPNKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        IFTA+NPNKVGIKY ES FTVMYRGI LGRASV GF QDPHS
Subjt:  IFTAINPNKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

A0A6J1EUX4 uncharacterized protein LOC111437836

4.5e-50

82.22

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LS+S HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P  P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

A0A6J1HXP7 uncharacterized protein LOC111468981

1.5e-50

82.96

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Query:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP
        +LSSS HR HPPY+PRSSS S ASFKGCCCCLFLL SFLALLVLA+VL+VVLALKPKKPQFDLQQV VQYM ITTPN P +P  ASLSLNIRM+FTA+NP
Subjt:  SLSSSGHR-HPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINP

Query:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        NKVGIKY ES FTVMYRGI LGRASV GFVQ+PHS
Subjt:  NKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

A0A6J1I8L5 uncharacterized protein LOC111470648

2.5e-48

82.81

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Query:  HRHPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINPNKVGIKY
        H  PPY PRSSSS  ASFKGCCCCLFLLFSFLALL+LA+VL+VVLALKPKKPQFDLQQV +QYM ITTP    NPT ASLSLNIRMIFTA+NPNKVGIKY
Subjt:  HRHPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINPNKVGIKY

Query:  GESHFTVMYRGILLGRASVRGFVQDPHS
        GES FTVMYRGI LGRAS+ GF QDPHS
Subjt:  GESHFTVMYRGILLGRASVRGFVQDPHS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

2.8e-44

66.67

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Query:  SSIVNCNSLSSSGHRHPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMI
        SS    N    +     PY    SSSS AS KGCCCCLFLLF+FLALLVLA+VL+V+LA+KPKKPQFDLQQV+V YM I+ P+   +PTTASLSL IRM+
Subjt:  SSIVNCNSLSSSGHRHPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMI

Query:  FTAINPNKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS
        FTA+NPNKVGI+YGES FTVMY+G+ LGRA+V GF QD HS
Subjt:  FTAINPNKVGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

Sequences

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CDS sequence

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ATGCCATCGTCAATAGTAAATTGCAACAGCCTATCGAGCTCCGGCCACCGCCACCCTCCCTACAACCCCAGATCCTCGTCGTCCTCCTTGGCCTCCTTCAAGGGTTGCTG
CTGCTGTCTCTTCCTCCTCTTTTCCTTCCTAGCCCTCCTCGTTTTGGCCATTGTCCTCCTCGTCGTCCTCGCCCTCAAGCCCAAGAAGCCCCAATTCGATCTCCAACAGG
TCAGCGTCCAATACATGAGAATCACCACTCCCAACGTTCCCAACAATCCCACTACCGCCTCTCTCTCCCTCAACATTCGAATGATATTCACCGCCATAAACCCTAACAAG
GTCGGCATCAAATACGGCGAGTCCCACTTCACCGTCATGTACCGAGGAATTCTTCTCGGTAGAGCCTCCGTTCGCGGCTTCGTCCAAGACCCCCACAGCTAG

mRNA sequence

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Protein sequence

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MPSSIVNCNSLSSSGHRHPPYNPRSSSSSLASFKGCCCCLFLLFSFLALLVLAIVLLVVLALKPKKPQFDLQQVSVQYMRITTPNVPNNPTTASLSLNIRMIFTAINPNK
VGIKYGESHFTVMYRGILLGRASVRGFVQDPHS

Spg035770 (gene) of Sponge gourd (cylindrica) v1 genome