; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035772 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035772
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold5:39617250..39617723
RNA-Seq ExpressionSpg035772
SyntenySpg035772
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]6.2e-1538.79Show/hide
Query:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI
        PF  +KALL   D+     LC+N+ WT +G   +KF   +       K+  S GGW R   +PLH+W  N F +IG  CGG+   A  +  KI  T+A I
Subjt:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI

Query:  KIKRPPQGFIPSSIVI
        K+K    GF+P+ I I
Subjt:  KIKRPPQGFIPSSIVI

KAA0044557.1 hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]1.1e-1438.79Show/hide
Query:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI
        PF  +KALL   D+     LC+N+ WT +G   +KF   +       K+  S GGW R   +PLH+W  N F  IG  CGG+   A  +  KI  T+A I
Subjt:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI

Query:  KIKRPPQGFIPSSIVI
        K+K    GF+P+ I I
Subjt:  KIKRPPQGFIPSSIVI

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.1e-1538.71Show/hide
Query:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK
        S  PFQ +KA+L  N    +  LC N   + W+ +G+ ++KF  +  N H+F    +  S GGW+R   +PLHLW  N FQ+IG+ CGG+   A  T   
Subjt:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK

Query:  IVFTDARIKIKRPPQGFIPSSIVI
            DA+IK++    GF+P+SI+I
Subjt:  IVFTDARIKIKRPPQGFIPSSIVI

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-1438.71Show/hide
Query:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK
        S  PFQ +KA+L  N    +  LC N   + W+ +G+ ++KF  +  N H+F    +  S GGW+R   +PLHLW  N FQ+IG+ CGG+   A  T   
Subjt:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK

Query:  IVFTDARIKIKRPPQGFIPSSIVI
            DA+IK++    GF+P+SI+I
Subjt:  IVFTDARIKIKRPPQGFIPSSIVI

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-1438.71Show/hide
Query:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK
        S  PFQ +KA+L  N    +  LC N   + W+ +G+ ++KF  +  N H+F    +  S GGW+R   +PLHLW  N FQ+IG+ CGG+   A  T   
Subjt:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK

Query:  IVFTDARIKIKRPPQGFIPSSIVI
            DA+IK++    GF+P+SI+I
Subjt:  IVFTDARIKIKRPPQGFIPSSIVI

TrEMBL top hitse value%identityAlignment
A0A5A7TEP0 DUF4283 domain-containing protein3.0e-1538.79Show/hide
Query:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI
        PF  +KALL   D+     LC+N+ WT +G   +KF   +       K+  S GGW R   +PLH+W  N F +IG  CGG+   A  +  KI  T+A I
Subjt:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI

Query:  KIKRPPQGFIPSSIVI
        K+K    GF+P+ I I
Subjt:  KIKRPPQGFIPSSIVI

A0A5A7TRS9 DUF4283 domain-containing protein5.1e-1538.79Show/hide
Query:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI
        PF  +KALL   D+     LC+N+ WT +G   +KF   +       K+  S GGW R   +PLH+W  N F  IG  CGG+   A  +  KI  T+A I
Subjt:  PFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARI

Query:  KIKRPPQGFIPSSIVI
        K+K    GF+P+ I I
Subjt:  KIKRPPQGFIPSSIVI

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein8.8e-1538.71Show/hide
Query:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK
        S  PFQ +KA+L  N    +  LC N   + W+ +G+ ++KF  +  N H+F    +  S GGW+R   +PLHLW  N FQ+IG+ CGG+   A  T   
Subjt:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK

Query:  IVFTDARIKIKRPPQGFIPSSIVI
            DA+IK++    GF+P+SI+I
Subjt:  IVFTDARIKIKRPPQGFIPSSIVI

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein3.9e-1538.71Show/hide
Query:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK
        S  PFQ +KA+L  N    +  LC N   + W+ +G+ ++KF  +  N H+F    +  S GGW+R   +PLHLW  N FQ+IG+ CGG+   A  T   
Subjt:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK

Query:  IVFTDARIKIKRPPQGFIPSSIVI
            DA+IK++    GF+P+SI+I
Subjt:  IVFTDARIKIKRPPQGFIPSSIVI

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein8.8e-1538.71Show/hide
Query:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK
        S  PFQ +KA+L  N    +  LC N   + W+ +G+ ++KF  +  N H+F    +  S GGW+R   +PLHLW  N FQ+IG+ CGG+   A  T   
Subjt:  SINPFQDNKALLHCNDQGTRDNLCRN---DDWTLIGDCKLKF--YPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWK

Query:  IVFTDARIKIKRPPQGFIPSSIVI
            DA+IK++    GF+P+SI+I
Subjt:  IVFTDARIKIKRPPQGFIPSSIVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGATGCTCTATCAATCCGTTCCAGGATAACAAAGCGCTGCTTCACTGCAATGATCAAGGTACAAGGGATAATCTTTGCCGCAATGATGATTGGACTCTAATTGG
GGATTGCAAATTGAAGTTCTATCCAATGAATACCCATAACTTCCTCAAAGACAAAATGAAAAGCTCCTCTGGAGGATGGATTAGAATCCTCAATTTACCTCTTCACCTTT
GGGAGGACAACATTTTCCAGTATATTGGGAATATATGTGGAGGGTATGAAACCACAGCCAGCCTCACTTCCTGGAAAATAGTCTTTACTGATGCCCGAATAAAGATTAAA
CGACCCCCGCAAGGTTTTATTCCCTCTTCGATTGTGATTCCAATGATGATTTCGGGAGAAGATGAATTTACCGTGAATCTCGAAGGCGAACAACCACCTTCTAAGATCGG
AATATCCATTGACGACCACCGCACGCCGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGATGCTCTATCAATCCGTTCCAGGATAACAAAGCGCTGCTTCACTGCAATGATCAAGGTACAAGGGATAATCTTTGCCGCAATGATGATTGGACTCTAATTGG
GGATTGCAAATTGAAGTTCTATCCAATGAATACCCATAACTTCCTCAAAGACAAAATGAAAAGCTCCTCTGGAGGATGGATTAGAATCCTCAATTTACCTCTTCACCTTT
GGGAGGACAACATTTTCCAGTATATTGGGAATATATGTGGAGGGTATGAAACCACAGCCAGCCTCACTTCCTGGAAAATAGTCTTTACTGATGCCCGAATAAAGATTAAA
CGACCCCCGCAAGGTTTTATTCCCTCTTCGATTGTGATTCCAATGATGATTTCGGGAGAAGATGAATTTACCGTGAATCTCGAAGGCGAACAACCACCTTCTAAGATCGG
AATATCCATTGACGACCACCGCACGCCGGAATAG
Protein sequenceShow/hide protein sequence
MDRCSINPFQDNKALLHCNDQGTRDNLCRNDDWTLIGDCKLKFYPMNTHNFLKDKMKSSSGGWIRILNLPLHLWEDNIFQYIGNICGGYETTASLTSWKIVFTDARIKIK
RPPQGFIPSSIVIPMMISGEDEFTVNLEGEQPPSKIGISIDDHRTPE