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Spg035823 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035823
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationscaffold5:39544629..39545029
RNA-Seq ExpressionSpg035823
SyntenySpg035823
Gene Ontology termsGO:0009735 - response to cytokinin (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]2.6e-2583.33Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L SSSS KIDKFSVSSPP     SP+S A +AAV SKYFLDQ
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2983.51Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAFPFCADRFG
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREAL SSSSLKIDKFSVSS PS MA SP SPATSAA     F   SESAF FCA+R G
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAFPFCADRFG

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-3486.14Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ----SESAFPFCADRF
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREAL SSSSLKIDKFSVSS PS MA SP SPATSAAV+SKYFL+Q    SESAF FCA+R 
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ----SESAFPFCADRF

Query:  G
        G
Subjt:  G

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]2.9e-2479.76Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEED REALVSSSS KIDKFSV SPPSP        +++AA+ SKYFLDQ
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ

PQP93653.1 hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]3.6e-1154.74Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAF
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+        ++L+SSSS K    S SSPPS    S +S A +A   SKYFL +   AF
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAF

TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein1.4e-2479.76Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ
        MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEED REALVSSSS KIDKFSV SPPSP        +++AA+ SKYFLDQ
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ

A0A314XQS6 Uncharacterized protein1.8e-1154.74Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAF
        M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+        ++L+SSSS K    S SSPPS    S +S A +A   SKYFL +   AF
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAF

A0A4Y7K232 Uncharacterized protein2.5e-1048.91Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSP------MATSPSSPATSAAVTSKYFLDQSESA
        ATSR+ RF+ E  PPQFVSVMRRR+PK+LDTI EEDHR+A   ++   +  FS S   SP      MAT   +  TS++ +S YF++ + SA
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSP------MATSPSSPATSAAVTSKYFLDQSESA

A0A5A7UJX7 Uncharacterized protein1.3e-2583.33Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ
        MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L SSSS KIDKFSVSSPP     SP+S A +AAV SKYFLDQ
Subjt:  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQ

A0A5E4FYK5 PREDICTED: galactosyltransferase family5.7e-1052.69Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAF
        A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE+        ++L+SSSS K    S  SPPS    S +S A +A   S+YFL +   AF
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDH------REALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)1.0e-1147.83Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSP-PSPMATSPSSPATSAAVTS---KYFLDQSESAFP
        ATSRLARFI+E  PPQFV+VMRRR+ KVLDTI EE+      S      +   +SSP  SP ++S SS + SA+ TS   K+ + ++  +FP
Subjt:  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSP-PSPMATSPSSPATSAAVTS---KYFLDQSESAFP

AT4G21060.1 Galactosyltransferase family protein5.8e-0763.41Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDHRE
        ATSRLARF+SE  PPQFV+VMRR   + + LDTI EE+++E
Subjt:  ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDHRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACATCTCGATTGGCCAGGTTCATCAGCGAGGCTTGCCCTCCCCAGTTCGTCTCTGTGATGAGGCGCAGAAGCCCCAAAGTTTTGGACACCATTAACGAAGA
AGACCACAGAGAAGCCCTAGTTTCCTCCTCCTCCTTGAAGATCGACAAATTCTCCGTTTCTTCGCCGCCGTCTCCCATGGCCACGTCGCCGTCTTCTCCAGCAACTTCCG
CCGCCGTTACTTCCAAATACTTTCTCGATCAGTCAGAATCTGCTTTTCCTTTTTGCGCCGATCGGTTCGGTCCATTCTGGCCGGGAATGGCGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACATCTCGATTGGCCAGGTTCATCAGCGAGGCTTGCCCTCCCCAGTTCGTCTCTGTGATGAGGCGCAGAAGCCCCAAAGTTTTGGACACCATTAACGAAGA
AGACCACAGAGAAGCCCTAGTTTCCTCCTCCTCCTTGAAGATCGACAAATTCTCCGTTTCTTCGCCGCCGTCTCCCATGGCCACGTCGCCGTCTTCTCCAGCAACTTCCG
CCGCCGTTACTTCCAAATACTTTCTCGATCAGTCAGAATCTGCTTTTCCTTTTTGCGCCGATCGGTTCGGTCCATTCTGGCCGGGAATGGCGTTGTAG
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALVSSSSLKIDKFSVSSPPSPMATSPSSPATSAAVTSKYFLDQSESAFPFCADRFGPFWPGMAL