CuGenDBv2

Gene ID	Spg035827
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial
Genome location	scaffold5:37761664..37776107
RNA-Seq Expression	Spg035827
Synteny	Spg035827
Gene Ontology terms	GO:0006260 - DNA replication (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003697 - single-stranded DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domains	IPR007694 - DNA helicase, DnaB-like, C-terminal IPR027032 - Twinkle-like protein IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7019451.1 Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.6e-150

85.67

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFGV TGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMEN+VREHARKLLEKRIKKPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGVSGL+      +       +T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

XP_022927084.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata]

5.6e-150

85.67

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFGV TGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMEN+VREHARKLLEKRIKKPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGVSGL+      +       +T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

XP_023000969.1 twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita maxima]

5.1e-151

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Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF +ID+YYHK+ GNEFGV TGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMEN+VREHARKLLEKRIKKPFF ARYGG+VERMS++ELEQGKQWLNDTFFL+RCENESLPSINWVLDLAKAAVLRHGVSGL+      +      ++T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGP+DLLQVCVRKVRNKVAGTIGEAYLAYN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

XP_023519715.1 twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]

7.3e-150

85.33

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Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFG+ TGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMEN+VREHARKLLEKRIKKPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGVSGL+      +       +T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

XP_038894379.1 twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida]

1.2e-152

87.33

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEALKEV+D AELYPIRGLF FKDYF EIDAYYHK+FGNEFGVSTGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNA+AGWKF+L
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMENKVR+HARKLLEK IKKPFF ARYGGSV+RMS+EELEQGK WLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGL+      +      ++T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHP+QLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPD GP+DLLQV VRKVRNKVAGTIGEAYLAYN +
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYM8 Uncharacterized protein

1.1e-146

83.67

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEALKEV+D AELYPI GLF+FKDYF EIDAYYHK+FGNEFGV TGW+ L+DLYNVVPGELTIVTG+PNSGKSEWIDALLCNLNA+AGWKF L
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSL-----MIICDRT
        CSMENKVREH RKLLEK IKKPFFV RYGGSVER+S EELEQGKQWL+DTFFL+R E +SLPSI+WVLDLAKAAVLRHGVSGL+           + ++T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSL-----MIICDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH CHVWFVAHPRQLQNWSG  PNMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYL YN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

A0A6J1CKU2 twinkle homolog protein, chloroplastic/mitochondrial isoform X2

1.8e-149

86.67

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEALKEV+D AEL+PIRGLF FKDYF EIDAYY K+FGNEFG STGWK L+ LYNVVPGELTIVTGIPNSGKSEWIDALLCNLNA+ GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMENKVREHARKLLEKRIKKPFF ARYG SVERMS EELE GKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV+GL+      +      ++T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDP+SGPVDLLQVCVRKVRNKVAGTIGEA+L YN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

A0A6J1CLF6 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

1.8e-149

86.67

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEALKEV+D AEL+PIRGLF FKDYF EIDAYY K+FGNEFG STGWK L+ LYNVVPGELTIVTGIPNSGKSEWIDALLCNLNA+ GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMENKVREHARKLLEKRIKKPFF ARYG SVERMS EELE GKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV+GL+      +      ++T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDP+SGPVDLLQVCVRKVRNKVAGTIGEA+L YN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

A0A6J1EH06 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

2.7e-150

85.67

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFGV TGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMEN+VREHARKLLEKRIKKPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGVSGL+      +       +T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

A0A6J1KLG2 twinkle homolog protein, chloroplastic/mitochondrial

2.5e-151

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF +ID+YYHK+ GNEFGV TGWKAL+DLYNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVL
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT
        CSMEN+VREHARKLLEKRIKKPFF ARYGG+VERMS++ELEQGKQWLNDTFFL+RCENESLPSINWVLDLAKAAVLRHGVSGL+      +      ++T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMII-----CDRT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV
        ETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGP+DLLQVCVRKVRNKVAGTIGEAYLAYN V
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV

SwissProt top hits

e value

%identity

Alignment

B5X582 Twinkle homolog protein, chloroplastic/mitochondrial

4.1e-127

71.81

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLM  GP  LKE I +AE YPI GLF FKD+F EIDAYY +  G+E+GVSTGWK L +LY+VVPGELT+VTGIPNSGKSEWIDA+LCNLN + GWKF L
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMIICD-----RT
        CSMENKVR+HARKLLEK IKKPFF A YG SV+RMSVEE ++GK+WLNDTF+ IRCE +SLPSI+WVL+ AKAAVLR+G+ GL+      +       +T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMIICD-----RT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYN
        ETEYVSQMLTK+KRF+QHHSCHVWFVAHP+QLQ+W GGAPN+YDISGSAHFINKCDNGI++HRNRD ++GP+DL+Q+ VRKVRNKVAG IG+AYL Y+
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYN

Arabidopsis top hits

e value

%identity

Alignment

AT1G30680.1 toprim domain-containing protein

2.9e-128

71.81

Show/hide

Query:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL
        +VLM  GP  LKE I +AE YPI GLF FKD+F EIDAYY +  G+E+GVSTGWK L +LY+VVPGELT+VTGIPNSGKSEWIDA+LCNLN + GWKF L
Subjt:  KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVL

Query:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMIICD-----RT
        CSMENKVR+HARKLLEK IKKPFF A YG SV+RMSVEE ++GK+WLNDTF+ IRCE +SLPSI+WVL+ AKAAVLR+G+ GL+      +       +T
Subjt:  CSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMIICD-----RT

Query:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYN
        ETEYVSQMLTK+KRF+QHHSCHVWFVAHP+QLQ+W GGAPN+YDISGSAHFINKCDNGI++HRNRD ++GP+DL+Q+ VRKVRNKVAG IG+AYL Y+
Subjt:  ETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAACCTCTACCCAGAAAAGTTCTGATGTACTTGGGCCCCGAAGCCCTGAAGGAGGTTATTGATGAAGCAGAGTTGTATCCTATACGTGGATTATTTCAATTCAAAGA
TTACTTCGCCGAGATTGATGCATATTATCACAAGCAATTTGGAAATGAATTTGGTGTCTCGACTGGATGGAAGGCTCTCAGTGATTTGTACAACGTTGTCCCGGGGGAGC
TTACTATAGTTACTGGTATTCCTAACTCAGGCAAGAGTGAATGGATTGATGCTCTGCTATGCAATCTTAATGCAAATGCTGGTTGGAAATTTGTTCTCTGCTCTATGGAA
AATAAGGTTCGAGAGCATGCAAGAAAACTATTGGAGAAACGCATCAAGAAGCCTTTCTTTGTTGCACGTTATGGTGGATCTGTAGAACGAATGAGTGTTGAGGAGTTGGA
ACAAGGCAAGCAATGGTTAAATGATACATTTTTTCTTATAAGGTGTGAAAATGAGTCCCTCCCGAGTATTAATTGGGTTCTGGATCTTGCAAAGGCAGCAGTTTTAAGGC
ATGGAGTTTCTGGACTGTTAACTAGAAGTTTGATGATTATTTGTGACAGGACTGAAACGGAATATGTAAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCAC
TCTTGCCATGTTTGGTTTGTTGCACATCCTAGACAGTTGCAGAACTGGTCTGGAGGTGCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGA
TAATGGAATCGTTATTCATCGTAATAGGGATCCCGACTCTGGTCCTGTTGATCTCCTACAAGTATGTGTACGGAAAGTAAGAAATAAGGTTGCAGGAACAATTGGCGAAG
CTTACTTGGCATATAATAGCGTGGCTCTCACTCCTCACCATCCCTTCACAAAAGAGAAGGAACAATTTTGGCTAAAATCAATAGGGAATTCTTTAGGTGTGAGCCCTTAT
GCGCCTTTTAAAACACCTGGAGAGATCAACATTGTTGCTATTGTTGGTCCTGAAGGGTTAGATGCTCTGAGTTTACTACTCGCACTGGTCAAAGCTCTTAGGGTCAATGC
TTTAGCCTTCTTATCGAGTTATTCACAATCGCTGCTAGATCGTTTGCTGCAAGGGCTGAATGACTGA

mRNA sequence

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Protein sequence

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MQPLPRKVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSME
NKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMIICDRTETEYVSQMLTKVKRFAQHH
SCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSVALTPHHPFTKEKEQFWLKSIGNSLGVSPY
APFKTPGEINIVAIVGPEGLDALSLLLALVKALRVNALAFLSSYSQSLLDRLLQGLND

Spg035827 (gene) of Sponge gourd (cylindrica) v1 genome