; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035867 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035867
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold5:38836640..38837083
RNA-Seq ExpressionSpg035867
SyntenySpg035867
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583852.1 hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5783.87Show/hide
Query:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGD
        M I S IAA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA+    GD
Subjt:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_022927447.1 uncharacterized protein LOC111434271 [Cucurbita moschata]1.6e-5783.87Show/hide
Query:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGD
        M I S IAA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA+    GD
Subjt:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_023000949.1 uncharacterized protein LOC111495232 [Cucurbita maxima]1.8e-5684.31Show/hide
Query:  IHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGDHI
        I S IAA A      AVIFLAGGSNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRS AA+   SGDHI
Subjt:  IHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGDHI

Query:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        RGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_023519911.1 uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo]2.1e-5783.87Show/hide
Query:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAA--SASGD
        M I S IAA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA     GD
Subjt:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAA--SASGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

XP_038895122.1 uncharacterized protein LOC120083432 [Benincasa hispida]6.4e-5481.21Show/hide
Query:  MPIHSLIAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGDHIRGAL
        +P  + + +  AVI LAG SNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH +RSGAA+    GDHIRGAL
Subjt:  MPIHSLIAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGDHIRGAL

Query:  LVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        LVASLVCGIIG+SLLIASAFIY FKFRKQ SRSSSSLSVSETTNII NK
Subjt:  LVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

TrEMBL top hitse value%identityAlignment
A0A0A0LVV5 Uncharacterized protein4.2e-5179.14Show/hide
Query:  ALAAVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLVCGII
        A A ++ LA  SNARDLRPSEHGL+YQNP A  +SSP+MQSFF+GNSWS+S+VALPKAMNTSLP QW NR+H +RSGA++A GDHIRGALLVASLVCGII
Subjt:  ALAAVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLVCGII

Query:  GVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        GVSLL+ASAFIY FKFRKQS  SSSS+SVSETTNIIANK
Subjt:  GVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

A0A1S3BC63 uncharacterized protein LOC1034883241.1e-5180Show/hide
Query:  LIAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLV
        L ++LA +I  LA  SNARDLRPSEHGL+YQNP A + SSP+MQSFFKGNSWS+S+VALPKAMNTSLP QWWNRSH +RSGA++A GDHIRGALLVASLV
Subjt:  LIAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLV

Query:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK
        CGIIGVSLL+ASAFIY FKFRKQ  SS SSSSLS SETTNIIANK
Subjt:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK

A0A5D3C2L6 Uncharacterized protein1.1e-5180Show/hide
Query:  LIAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLV
        L ++LA +I  LA  SNARDLRPSEHGL+YQNP A + SSP+MQSFFKGNSWS+S+VALPKAMNTSLP QWWNRSH +RSGA++A GDHIRGALLVASLV
Subjt:  LIAALAAVI-FLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLV

Query:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK
        CGIIGVSLL+ASAFIY FKFRKQ  SS SSSSLS SETTNIIANK
Subjt:  CGIIGVSLLIASAFIYIFKFRKQ--SSRSSSSLSVSETTNIIANK

A0A6J1EH69 uncharacterized protein LOC1114342717.8e-5883.87Show/hide
Query:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGD
        M I S IAA+A      AVIFLAGGSNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRSGAA+    GD
Subjt:  MPIHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGD

Query:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        HIRGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  HIRGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

A0A6J1KLE3 uncharacterized protein LOC1114952328.7e-5784.31Show/hide
Query:  IHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGDHI
        I S IAA A      AVIFLAGGSNARDLRPSEHGLEYQNPGA E SSP+MQSFFKGNSWSSS+VALPKAMNTSLP QWWNRSH DRS AA+   SGDHI
Subjt:  IHSLIAALA------AVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAAS--ASGDHI

Query:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK
        RGALLVASLVCG+IGVSLLIASAFIY+FKFRKQ +RSSSSLSVSETTNIIANK
Subjt:  RGALLVASLVCGIIGVSLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein3.7e-0737.61Show/hide
Query:  NARDLRPSEHGLE-YQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDH-----IRGALLVASLVCGIIGVSLLI
        NAR+LRPS+HGLE Y  PG     S EM SFF G   S+   ++    ++ LP          +S   + S D      +   L+V SLVCG+ GV+L++
Subjt:  NARDLRPSEHGLE-YQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDH-----IRGALLVASLVCGIIGVSLLI

Query:  ASAFIYIFKFRKQSSRS
        ASA IY   + K  + S
Subjt:  ASAFIYIFKFRKQSSRS

AT4G21740.1 unknown protein3.2e-1138.46Show/hide
Query:  VIFLAGGSNARDLRPSEHGLEYQ-NPGATETSSP--EMQSFFKGNSWSSS-----EVALPK--AMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVAS
        ++   G S A +LRPS+HGL+YQ +   TE+ SP  +M+SFF G+S SSS        LPK  A +      WW      R GA       +R   L AS
Subjt:  VIFLAGGSNARDLRPSEHGLEYQ-NPGATETSSP--EMQSFFKGNSWSSS-----EVALPK--AMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVAS

Query:  LVCGIIGVSLLIASAFIYIFKFRKQSSRSS
        ++CG+ GV+LL+    IY F++RK +  +S
Subjt:  LVCGIIGVSLLIASAFIYIFKFRKQSSRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATTCACTCGCTCATTGCCGCCCTCGCCGCCGTCATTTTCCTCGCCGGAGGCTCCAATGCGAGGGACCTCCGTCCGTCGGAGCACGGCTTGGAGTACCAAAACCC
TGGCGCTACCGAAACATCCTCGCCGGAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCCAAGGCGATGAACACCAGCCTGCCGCAGC
AGTGGTGGAATCGCAGCCACGGCGACCGCTCTGGTGCCGCTTCCGCCAGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTT
TCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAGTAGTAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATCGCTAACAA
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGATTCACTCGCTCATTGCCGCCCTCGCCGCCGTCATTTTCCTCGCCGGAGGCTCCAATGCGAGGGACCTCCGTCCGTCGGAGCACGGCTTGGAGTACCAAAACCC
TGGCGCTACCGAAACATCCTCGCCGGAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGAGGTCGCGCTTCCCAAGGCGATGAACACCAGCCTGCCGCAGC
AGTGGTGGAATCGCAGCCACGGCGACCGCTCTGGTGCCGCTTCCGCCAGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTT
TCTTTGCTGATTGCTTCTGCTTTTATTTACATCTTCAAGTTCAGGAAGCAGAGTAGTAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATCGCTAACAA
GTGA
Protein sequenceShow/hide protein sequence
MPIHSLIAALAAVIFLAGGSNARDLRPSEHGLEYQNPGATETSSPEMQSFFKGNSWSSSEVALPKAMNTSLPQQWWNRSHGDRSGAASASGDHIRGALLVASLVCGIIGV
SLLIASAFIYIFKFRKQSSRSSSSLSVSETTNIIANK