; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035918 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035918
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold5:38162811..38164394
RNA-Seq ExpressionSpg035918
SyntenySpg035918
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]3.2e-1728.99Show/hide
Query:  YDRFVNNLAREKYAELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYN
        + +F ++ A+ ++    K+   FE GF        G  P  + I +    W++F   P SVNA VV+EFYANI K       VRG ++ ++P AI   ++
Subjt:  YDRFVNNLAREKYAELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYN

Query:  LQNF--PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKIIA
        LQ+    HA + E A + + +++   + ++  E  +W   +T + +                                 R+LL  +I  S  IDVG+II 
Subjt:  LQNF--PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKIIA

Query:  DEISGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVIL
         +++ C  KK   L FPN IT LC++  V EN  D IL
Subjt:  DEISGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVIL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]8.5e-1828.02Show/hide
Query:  FVNNLAREKYAELLKRDFLFERGFSGDLPHFLRIG------IADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNLQNF
        FV+  A+E Y  +  R   FE GF         +G      +  H W++F   P  VNA +V+EFY+NI +      +VRGI + ++P AIN  + LQ  
Subjt:  FVNNLAREKYAELLKRDFLFERGFSGDLPHFLRIG------IADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNLQNF

Query:  PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKIIADEISGC
                A    +E     + ++ + G +W   + +++T                                +R+LL  +IL   +ID+GKII +    C
Subjt:  PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKIIADEISGC

Query:  WKKKVGKLFFPNTITMLCKRVGVPENEGDVIL
         K++   L FPN IT LC++  V E   D IL
Subjt:  WKKKVGKLFFPNTITMLCKRVGVPENEGDVIL

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]1.2e-1628.33Show/hide
Query:  LLYDRFVNNLAREKYAELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINAL
        + + +F N+ A+ ++     R+  FE GF        G  P  + I +    W +F   P SVNA +V+EFYANI K       VRG ++ ++  AIN  
Subjt:  LLYDRFVNNLAREKYAELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINAL

Query:  YNLQNF--PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKI
        ++LQ     HA + E A    + +    + ++  E  +W   +T + +                                 R+LL  +++ S  IDVG+I
Subjt:  YNLQNF--PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKI

Query:  IADEISGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVIL
        I  ++  C  KK   L FPN IT LC++  V EN  D IL
Subjt:  IADEISGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.1e-2029.92Show/hide
Query:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP   ++ I  H W++FC+ PE     +VREFYAN+         VRG++V WS  AINA++ L
Subjt:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL

Query:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI
         + P   ++E     +   L   +  V + GA+W +S                                 K   ++R+LL  ++L   SI+VG++I  EI
Subjt:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI

Query:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQE
          C  +K G LFFP+ IT LC+    P    +  L + G ID   +AR+  TQE
Subjt:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.4e-2029.72Show/hide
Query:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP   ++ I  H W++FC+ PE     +VREFYAN+   E     VRG++V WS  AINA++ L
Subjt:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL

Query:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI
         + P   ++E     + + L   +  V   GA+W +S                                 K   ++R+LL  ++L   SI+VG++I  EI
Subjt:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI

Query:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARL
          C  +K G LFFP+ IT LC+    P    +  L + G ID   +AR+
Subjt:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.5e-2029.92Show/hide
Query:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP   ++ I  H W++FC+ PE     +VREFYAN+         VRG++V WS  AINA++ L
Subjt:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL

Query:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI
         + P   ++E     +   L   +  V + GA+W +S                                 K   ++R+LL  ++L   SI+VG++I  EI
Subjt:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI

Query:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQE
          C  +K G LFFP+ IT LC+    P    +  L + G ID   +AR+  TQE
Subjt:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-2029.72Show/hide
Query:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL
        +F    A  +Y   +  R    E+GF        G LP   ++ I  H W++FC+ PE     +VREFYAN+   E     VRG++V WS  AINA++ L
Subjt:  RFVNNLAREKYA-ELLKRDFLFERGF-------SGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNL

Query:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI
         + P   ++E     + + L   +  V   GA+W +S                                 K   ++R+LL  ++L   SI+VG++I  EI
Subjt:  QNFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKT------------------------------EKRTFQERVLLAFTILRSLSIDVGKIIADEI

Query:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARL
          C  +K G LFFP+ IT LC+    P    +  L + G ID   +AR+
Subjt:  SGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGIIDTPNLARL

A0A6A2ZUE4 Uncharacterized protein4.1e-1828.02Show/hide
Query:  FVNNLAREKYAELLKRDFLFERGFSGDLPHFLRIG------IADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNLQNF
        FV+  A+E Y  +  R   FE GF         +G      +  H W++F   P  VNA +V+EFY+NI +      +VRGI + ++P AIN  + LQ  
Subjt:  FVNNLAREKYAELLKRDFLFERGFSGDLPHFLRIG------IADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNLQNF

Query:  PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKIIADEISGC
                A    +E     + ++ + G +W   + +++T                                +R+LL  +IL   +ID+GKII +    C
Subjt:  PHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQ------------------------------ERVLLAFTILRSLSIDVGKIIADEISGC

Query:  WKKKVGKLFFPNTITMLCKRVGVPENEGDVIL
         K++   L FPN IT LC++  V E   D IL
Subjt:  WKKKVGKLFFPNTITMLCKRVGVPENEGDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAGTAAAGGCAAAGAAGAAGAAGACACCAGAAGAAAA
AGAAGCTAAAAGAAGAAGAAAACACCAGAGGACTGAAGATCAAGAAGTTGCTCAGAAAACGGCGGAGGATATTATTGCGGAAGAAGATCCGAAAGAACCAGAAGGACGGA
ATCAAGAGCAGTCTGAGCCAAGAGTTGCGGATACAGAGGGAGTTCGAGAAGAAAATGCAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAG
GAAGTTCAAGAAAAGCAGGTCGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCGCCTGAAGAAGTTAGTGAGCAAGAAAAGGAGGCTCGTGTGGAGGTGATTATGCCGGA
AGTGCCCAAACGCCGCTGTATAAAGCAAAAAGCGGGTCGTGTTAAGGTAGTCCGAGCTAATACCCCCTCACCTCCAGCTACTGATTCTGAAAGAGAGAATGCTGAGAAAG
AAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAAAGATTGCGCAAGCAAAGGGCAGACAGGGGCAAGAGTGTTGCT
GCGGCATCGGAGGAACCTGATGAAATAGAAGAGTCACAATTGCTGTATGATCGCTTTGTCAATAATCTTGCCAGAGAAAAATATGCAGAGTTGCTGAAAAGAGACTTCCT
GTTTGAGAGGGGATTTAGTGGTGATCTTCCACATTTTCTGAGGATTGGTATTGCAGACCACGGTTGGGAACGGTTTTGTTCAAGGCCTGAATCTGTGAACGCGCAGGTGG
TGCGGGAGTTTTATGCAAATATTGACAAAGAAGAAGGTTTCCTAGCGATTGTTCGAGGTATTGAGGTTGATTGGAGTCCTGGTGCTATTAATGCACTGTATAACCTTCAA
AATTTCCCCCACGCAGCATATAATGAGATGGCTGTAGCGCCATCCAATGAGCAGCTGAGTGATGCTGTGAGGGAAGTTGGTATTGAAGGGGCGCAGTGGCGGCTTTCGAA
AACAGAGAAGAGGACGTTCCAGGAACGAGTGCTTCTAGCTTTCACTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGTTGTTGGA
AGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTCTGCAAGCGAGTAGGGGTTCCAGAGAATGAAGGAGATGTGATATTATTTGACAAGGGAATCATT
GACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTGGTCTACGACATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGTAGGCA
GGAGTTTGCCGAGAGGCAAGCTTTAACCTTTGGAACTATGTTAGAACTCGTGATGCCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAGTAAAGGCAAAGAAGAAGAAGACACCAGAAGAAAA
AGAAGCTAAAAGAAGAAGAAAACACCAGAGGACTGAAGATCAAGAAGTTGCTCAGAAAACGGCGGAGGATATTATTGCGGAAGAAGATCCGAAAGAACCAGAAGGACGGA
ATCAAGAGCAGTCTGAGCCAAGAGTTGCGGATACAGAGGGAGTTCGAGAAGAAAATGCAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAG
GAAGTTCAAGAAAAGCAGGTCGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCGCCTGAAGAAGTTAGTGAGCAAGAAAAGGAGGCTCGTGTGGAGGTGATTATGCCGGA
AGTGCCCAAACGCCGCTGTATAAAGCAAAAAGCGGGTCGTGTTAAGGTAGTCCGAGCTAATACCCCCTCACCTCCAGCTACTGATTCTGAAAGAGAGAATGCTGAGAAAG
AAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAAAGATTGCGCAAGCAAAGGGCAGACAGGGGCAAGAGTGTTGCT
GCGGCATCGGAGGAACCTGATGAAATAGAAGAGTCACAATTGCTGTATGATCGCTTTGTCAATAATCTTGCCAGAGAAAAATATGCAGAGTTGCTGAAAAGAGACTTCCT
GTTTGAGAGGGGATTTAGTGGTGATCTTCCACATTTTCTGAGGATTGGTATTGCAGACCACGGTTGGGAACGGTTTTGTTCAAGGCCTGAATCTGTGAACGCGCAGGTGG
TGCGGGAGTTTTATGCAAATATTGACAAAGAAGAAGGTTTCCTAGCGATTGTTCGAGGTATTGAGGTTGATTGGAGTCCTGGTGCTATTAATGCACTGTATAACCTTCAA
AATTTCCCCCACGCAGCATATAATGAGATGGCTGTAGCGCCATCCAATGAGCAGCTGAGTGATGCTGTGAGGGAAGTTGGTATTGAAGGGGCGCAGTGGCGGCTTTCGAA
AACAGAGAAGAGGACGTTCCAGGAACGAGTGCTTCTAGCTTTCACTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGTTGTTGGA
AGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTCTGCAAGCGAGTAGGGGTTCCAGAGAATGAAGGAGATGTGATATTATTTGACAAGGGAATCATT
GACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTGGTCTACGACATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGTAGGCA
GGAGTTTGCCGAGAGGCAAGCTTTAACCTTTGGAACTATGTTAGAACTCGTGATGCCAATCTGA
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPEAPKVKAKKKKTPEEKEAKRRRKHQRTEDQEVAQKTAEDIIAEEDPKEPEGRNQEQSEPRVADTEGVREENAEEVREENTEEVREENTE
EVQEKQVEDVQEEQAEVAPEEVSEQEKEARVEVIMPEVPKRRCIKQKAGRVKVVRANTPSPPATDSERENAEKEEREKKEAEDKAREEAEKKAEEERLRKQRADRGKSVA
AASEEPDEIEESQLLYDRFVNNLAREKYAELLKRDFLFERGFSGDLPHFLRIGIADHGWERFCSRPESVNAQVVREFYANIDKEEGFLAIVRGIEVDWSPGAINALYNLQ
NFPHAAYNEMAVAPSNEQLSDAVREVGIEGAQWRLSKTEKRTFQERVLLAFTILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRVGVPENEGDVILFDKGII
DTPNLARLQRTQEAHQGGLVYDINTILEQLALSASRQEFAERQALTFGTMLELVMPI