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Spg035999 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035999
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDelta-1-pyrroline-5-carboxylate synthase
Genome locationscaffold5:25157494..25161632
RNA-Seq ExpressionSpg035999
SyntenySpg035999
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0009556 - microsporogenesis (biological process)
GO:0035825 - homologous recombination (biological process)
GO:0000785 - chromatin (cellular component)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039776 - Sister chromatid cohesion protein Pds5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598548.1 hypothetical protein SDJN03_08326, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

KAG7029481.1 Sister chromatid cohesion protein PDS5-like B-B [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

XP_022961960.1 protein starmaker-like isoform X1 [Cucurbita moschata]2.2e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

XP_023545878.1 E3 ubiquitin-protein ligase RBBP6-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

XP_023545879.1 E3 ubiquitin-protein ligase RBBP6-like isoform X2 [Cucurbita pepo subsp. pepo]2.2e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

TrEMBL top hitse value%identityAlignment
A0A6J1HBT1 protein starmaker-like isoform X21.0e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

A0A6J1HDP8 protein starmaker-like isoform X11.0e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

A0A6J1K1Y9 protein starmaker-like isoform X13.0e-1581.48Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVA C+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

A0A6J1KAT2 protein starmaker-like isoform X23.0e-1581.48Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSALTPSLKAL+SDQL RH DIDVKVAVA C+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

A0A6J1KIV6 protein starmaker-like isoform X13.0e-1583.33Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSAL PSLKALVSDQL RH DIDVKVAVAAC+ EITRIT PDAPY+DEQMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

SwissProt top hitse value%identityAlignment
O04015 Delta-1-pyrroline-5-carboxylate synthase2.2e-0745.71Show/hide
Query:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL
        V +R S    +A+  +DR  ILLDVA      E +I +EN  D+ A + +GYEKSL+S LALK GK+  L
Subjt:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL

O04226 Delta-1-pyrroline-5-carboxylate synthase 13.6e-0541.43Show/hide
Query:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL
        V +R    H + L  E+R+ ILLDVA      E++I  EN  D+ A + +GYEK LV+ L +K GK+  L
Subjt:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL

P54888 Delta-1-pyrroline-5-carboxylate synthase B1.2e-0541.43Show/hide
Query:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL
        V +R S    +AL  EDR+ IL D+A      E  I  EN +D+ A +++GYE+SLV+ L +K GK+  L
Subjt:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL

Q941T1 Delta-1-pyrroline-5-carboxylate synthase 21.6e-0538.57Show/hide
Query:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL
        V +R    H + L  E+R+ ILLD+A      E++I  EN  D+   +D GY+KSLV+ + +K GK++ L
Subjt:  VYSRHSCCHYKALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL

Q96480 Delta-1-pyrroline-5-carboxylate synthase1.0e-0443.33Show/hide
Query:  KALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL
        +AL  ++R  IL D+A      E  I+ EN  D+ A + +GYEKSL+S LAL  GK+  L
Subjt:  KALKFEDRRNILLDVA------ENMIMVENYVDIKATEDSGYEKSLVSHLALKLGKVQKL

Arabidopsis top hitse value%identityAlignment
AT1G15940.1 Tudor/PWWP/MBT superfamily protein2.6e-1159.26Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        +Q AL P ++ALVS  L R+ D DV+V+V +C+ EI RIT P+APY+DEQMKDI
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

AT1G80810.1 Tudor/PWWP/MBT superfamily protein1.3e-1059.26Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSAL PS  ALVS  L  H D DV+V+V +C+ EI RIT P+ PYSD+ MK+I
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

AT1G80810.2 Tudor/PWWP/MBT superfamily protein1.3e-1059.26Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQSAL PS  ALVS  L  H D DV+V+V +C+ EI RIT P+ PYSD+ MK+I
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

AT4G31880.1 LOCATED IN: cytosol, chloroplast2.3e-1566.67Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQ+ALTP +K LV  +L +H D+DVKVAVAAC+ EITRIT PDAPY D+QMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI

AT4G31880.2 LOCATED IN: cytosol2.3e-1566.67Show/hide
Query:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI
        MQ+ALTP +K LV  +L +H D+DVKVAVAAC+ EITRIT PDAPY D+QMK++
Subjt:  MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTGCGCTCACTCCATCTTTGAAAGCACTAGTTTCTGATCAGCTTCATAGGCATTTGGACATTGATGTCAAAGTTGCAGTTGCTGCATGCATGGGTGAAATAAC
TAGGATCACTACACCTGATGCCCCTTACAGTGATGAGCAAATGAAGGACATAACCTTTGAATTCTCGACATTTGTTGTGTTTATATTCTTGGTTGTTGTGCCTGAGGTTT
ATTCAAGGCATTCCTGTTGTCATTACAAGGCTCTCAAATTTGAAGATAGGAGAAACATATTGTTGGATGTAGCTGAAAATATGATTATGGTTGAGAACTATGTTGATATT
AAAGCTACTGAGGATTCTGGTTATGAGAAGTCTTTGGTATCTCATTTGGCTCTAAAGCTTGGAAAGGTGCAGAAACTTCATTCGTGGAAACTACTTGTTATAGATTCAAC
ACACATGCAACAATCCCAGAATACTCTCAGGCAAGAAACCACTCTAACTCACTGTGTGAATTACTCTGTTTCGATGAAGGAGAATCCTCACCTCTCACGCACTGTGAACA
CTCAGAAAACAAGAAGAATTGAAGTACACACAAGCTTAAAGTGGTTCGGCAACTTGGCCTACGTCCACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGTGCGCTCACTCCATCTTTGAAAGCACTAGTTTCTGATCAGCTTCATAGGCATTTGGACATTGATGTCAAAGTTGCAGTTGCTGCATGCATGGGTGAAATAAC
TAGGATCACTACACCTGATGCCCCTTACAGTGATGAGCAAATGAAGGACATAACCTTTGAATTCTCGACATTTGTTGTGTTTATATTCTTGGTTGTTGTGCCTGAGGTTT
ATTCAAGGCATTCCTGTTGTCATTACAAGGCTCTCAAATTTGAAGATAGGAGAAACATATTGTTGGATGTAGCTGAAAATATGATTATGGTTGAGAACTATGTTGATATT
AAAGCTACTGAGGATTCTGGTTATGAGAAGTCTTTGGTATCTCATTTGGCTCTAAAGCTTGGAAAGGTGCAGAAACTTCATTCGTGGAAACTACTTGTTATAGATTCAAC
ACACATGCAACAATCCCAGAATACTCTCAGGCAAGAAACCACTCTAACTCACTGTGTGAATTACTCTGTTTCGATGAAGGAGAATCCTCACCTCTCACGCACTGTGAACA
CTCAGAAAACAAGAAGAATTGAAGTACACACAAGCTTAAAGTGGTTCGGCAACTTGGCCTACGTCCACTATTGA
Protein sequenceShow/hide protein sequence
MQSALTPSLKALVSDQLHRHLDIDVKVAVAACMGEITRITTPDAPYSDEQMKDITFEFSTFVVFIFLVVVPEVYSRHSCCHYKALKFEDRRNILLDVAENMIMVENYVDI
KATEDSGYEKSLVSHLALKLGKVQKLHSWKLLVIDSTHMQQSQNTLRQETTLTHCVNYSVSMKENPHLSRTVNTQKTRRIEVHTSLKWFGNLAYVHY