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Spg036101 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036101
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMini zinc finger
Genome locationscaffold5:48212247..48212543
RNA-Seq ExpressionSpg036101
SyntenySpg036101
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036083.1 mini zinc finger protein 1 [Cucumis melo var. makuwa]3.3e-3882.69Show/hide
Query:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQVVVKR        S  S+N N+ N SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YSPP
        YSPP
Subjt:  YSPP

XP_004137410.1 mini zinc finger protein 1 [Cucumis sativus]1.2e-3781.73Show/hide
Query:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQVVVKR        S  S+N N+ N SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGS+GALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YSPP
        YSPP
Subjt:  YSPP

XP_008442199.1 PREDICTED: mini zinc finger protein 1 [Cucumis melo]3.3e-3882.69Show/hide
Query:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQVVVKR        S  S+N N+ N SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YSPP
        YSPP
Subjt:  YSPP

XP_022137501.1 mini zinc finger protein 2 [Momordica charantia]7.3e-3894.44Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVV
        MMKKRQVVVKRS+GSSNRNSS S+SSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVV
Subjt:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVV

XP_022949221.1 mini zinc finger protein 1 [Cucurbita moschata]2.0e-4391.75Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR+DGSSNRNSS+S+SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

TrEMBL top hitse value%identityAlignment
A0A1S3B557 mini zinc finger protein 11.6e-3882.69Show/hide
Query:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQVVVKR        S  S+N N+ N SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YSPP
        YSPP
Subjt:  YSPP

A0A5A7SZK7 Mini zinc finger protein 11.6e-3882.69Show/hide
Query:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQVVVKR        S  S+N N+ N SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YSPP
        YSPP
Subjt:  YSPP

A0A5D3BJJ4 Mini zinc finger protein 11.6e-3882.69Show/hide
Query:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQVVVKR        S  S+N N+ N SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVVVKR--------SDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YSPP
        YSPP
Subjt:  YSPP

A0A6J1GBE8 mini zinc finger protein 19.6e-4491.75Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR+DGSSNRNSS+S+SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

A0A6J1K9G7 mini zinc finger protein 19.6e-4491.75Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR+DGSSNRNSS+S+SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 12.1e-1960Show/hide
Query:  RSDGSSNRNSSNSSSSSVVR----SVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVE
        RS      N S +++++  R     VVRY ECQ+NHAA+IGG+AVDGCREF+A+G EG+  AL CAACGCHR+FHRREVE
Subjt:  RSDGSSNRNSSNSSSSSVVR----SVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVE

Q0J5F8 Mini zinc finger protein 45.4e-2052.08Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSV------VRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        M KR V+++R +    +      +++VV ++      VRYGEC++NHAA +GG+AVDGCREFLA GEEG+ GAL CAACGCHR+FHRR V  +  C
Subjt:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSV------VRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Q2Q493 Mini zinc finger protein 31.3e-2969.79Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MKKRQVV+K+   S    SS+S+        VRY ECQKNHAANIGGYAVDGCREF+A+   G + ALTCAACGCHRNFHRREV+TEVVCEYSPPN
Subjt:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

Q9CA51 Mini zinc finger protein 14.3e-3372.28Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSS----NSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        MMKKRQ+V+K+   +SN +SS    +SSSSS   S VRY ECQKNHAANIGGYAVDGCREF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEYSPP
Subjt:  MMKKRQVVVKRSDGSSNRNSS----NSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

Query:  N
        N
Subjt:  N

Q9LJW5 Mini zinc finger protein 24.9e-2966.67Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        M+KRQVV++R+       SS+++SS  VR+ VRYGECQKNHAA +GGYAVDGCREF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+ + P
Subjt:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger9.2e-3169.79Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MKKRQVV+K+   S    SS+S+        VRY ECQKNHAANIGGYAVDGCREF+A+   G + ALTCAACGCHRNFHRREV+TEVVCEYSPPN
Subjt:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

AT1G74660.1 mini zinc finger 13.1e-3472.28Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSS----NSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        MMKKRQ+V+K+   +SN +SS    +SSSSS   S VRY ECQKNHAANIGGYAVDGCREF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEYSPP
Subjt:  MMKKRQVVVKRSDGSSNRNSS----NSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

Query:  N
        N
Subjt:  N

AT2G02540.1 homeobox protein 212.8e-1962.5Show/hide
Query:  VVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSP
        V++Y EC KNHAA +GG A+DGC EF+ +GEEGS  ALTC+ C CHRNFHRRE E E    +SP
Subjt:  VVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSP

AT3G28917.1 mini zinc finger 23.5e-3066.67Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        M+KRQVV++R+       SS+++SS  VR+ VRYGECQKNHAA +GGYAVDGCREF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+ + P
Subjt:  MKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

AT4G24660.1 homeobox protein 228.1e-1954.67Show/hide
Query:  DGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVET
        +G+++        S  V + +RY EC KNHA NIGG+AVDGC EF+ +GE+G+  AL CAACGCHRNFHR+E E+
Subjt:  DGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGAAACGGCAAGTAGTTGTTAAAAGATCAGATGGATCATCAAATAGAAACAGCAGCAACAGCTCTTCATCTTCAGTTGTAAGAAGTGTGGTGAGATATGGAGA
GTGCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGCTGCAGAGAGTTCTTGGCAAATGGAGAAGAAGGCTCCAATGGAGCTCTCACTTGTGCTGCTT
GTGGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAGTACTCTCCTCCCAATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGAAACGGCAAGTAGTTGTTAAAAGATCAGATGGATCATCAAATAGAAACAGCAGCAACAGCTCTTCATCTTCAGTTGTAAGAAGTGTGGTGAGATATGGAGA
GTGCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGCTGCAGAGAGTTCTTGGCAAATGGAGAAGAAGGCTCCAATGGAGCTCTCACTTGTGCTGCTT
GTGGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAGTACTCTCCTCCCAATGGTTGA
Protein sequenceShow/hide protein sequence
MMKKRQVVVKRSDGSSNRNSSNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPNG