; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036132 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036132
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain, type 1/2
Genome locationscaffold5:45625421..45627724
RNA-Seq ExpressionSpg036132
SyntenySpg036132
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584250.1 hypothetical protein SDJN03_20182, partial [Cucurbita argyrosperma subsp. sororia]4.9e-8677.82Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPH
        MAKPTNQLRILAPPDPDSP  K PFRAP S SMA N ST AKL+S +AAA   PP PSPLSNHIPFS+LH Q   SSQ+PK+ NP P +TVS+MVKSKPH
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPH

Query:  LQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK
        LQK+ASGGDEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGVK
Subjt:  LQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK

Query:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

KAG7019845.1 hypothetical protein SDJN02_18810, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-8777.92Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA----PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKP
        MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA    PP PSPLSNHIPFS+LH Q   SSQ+PK+SNP P +TV +MVKSKP
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA----PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKP

Query:  HLQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGV
        HLQK+ASGGDEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGV
Subjt:  HLQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGV

Query:  KVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        KVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  KVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

XP_022924012.1 uncharacterized protein LOC111431561 [Cucurbita moschata]2.0e-8778.24Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPH
        MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA   PP PSPLSNHIPFS+LH Q+  SSQ+PK+ NP P +TVS+MVKSKPH
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPH

Query:  LQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK
        LQK+ASGGDEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGVK
Subjt:  LQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK

Query:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

XP_023000852.1 uncharacterized protein LOC111495174 [Cucurbita maxima]2.2e-8678.15Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHL
        MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA  PP PSPLSNHIPFS LH Q    SQ+PK+SNP P +TV +MVKSKPHL
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHL

Query:  QKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKV
        QK+ASGGDEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGVKV
Subjt:  QKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKV

Query:  VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

XP_023520376.1 uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo]3.4e-8778.57Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHL
        MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA  PP PSPLSNHIPFS+LH Q   SSQ+PK+SNP P +TVS+MVKSKPHL
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHL

Query:  QKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKV
        QK+ASG DEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGVKV
Subjt:  QKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKV

Query:  VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

TrEMBL top hitse value%identityAlignment
A0A0A0LW58 Uncharacterized protein3.1e-7874.26Show/hide
Query:  MAKPTNQLRILAPPD-PDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQ
        MAKPTNQ R LAPPD  DSPP K  FRA SS S+A N S  +KL+S++AA  P PS LS HIPFS LHSQT  SSQR K+ NP P ++VSSM+KSKPHLQ
Subjt:  MAKPTNQLRILAPPD-PDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQ

Query:  KMASGGDEKLSKMCRELGGKKFFDEKNGVDDG---KGLCLVVKEKE--KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKVV
        K+ SGGDEKLSK+CRELG KKFF EK   +DG   KGLCLVVK+KE  +EKELKEPQK  ++ SLRPTVSLLRK GRRKSF  SQVEL+DIFAKNGVKVV
Subjt:  KMASGGDEKLSKMCRELGGKKFFDEKNGVDDG---KGLCLVVKEKE--KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKVV

Query:  SVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        SVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLKR
Subjt:  SVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

A0A1S3AVF4 uncharacterized protein LOC1034831073.9e-8174.48Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQK
        MAKPTNQ R LAPPD DSPP K  FRA SS S+A N ST  KL+S++AA  P PS LS HIPFS+LHSQ   SSQR K+ NP P  TVSSM+KSKPHLQK
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQK

Query:  MASGGDEKLSKMCRELGGKKFFDEKNGVDDG---KGLCLVVKEKE-----KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK
        + SGGDEK SK+CRELG KKFFD+K   +DG   KGLCLVVKEKE     +EKELKEPQKG ++ SLRPTVSLLRK GRRKSF  SQVEL+DIFAKNGVK
Subjt:  MASGGDEKLSKMCRELGGKKFFDEKNGVDDG---KGLCLVVKEKE-----KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK

Query:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLKR
Subjt:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

A0A5D3BH95 Dynein light chain, type 1/23.9e-8174.48Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQK
        MAKPTNQ R LAPPD DSPP K  FRA SS S+A N ST  KL+S++AA  P PS LS HIPFS+LHSQ   SSQR K+ NP P  TVSSM+KSKPHLQK
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQK

Query:  MASGGDEKLSKMCRELGGKKFFDEKNGVDDG---KGLCLVVKEKE-----KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK
        + SGGDEK SK+CRELG KKFFD+K   +DG   KGLCLVVKEKE     +EKELKEPQKG ++ SLRPTVSLLRK GRRKSF  SQVEL+DIFAKNGVK
Subjt:  MASGGDEKLSKMCRELGGKKFFDEKNGVDDG---KGLCLVVKEKE-----KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK

Query:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLKR
Subjt:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

A0A6J1E7P6 uncharacterized protein LOC1114315619.7e-8878.24Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPH
        MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA   PP PSPLSNHIPFS+LH Q+  SSQ+PK+ NP P +TVS+MVKSKPH
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPH

Query:  LQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK
        LQK+ASGGDEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGVK
Subjt:  LQKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVK

Query:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  VVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

A0A6J1KET7 uncharacterized protein LOC1114951741.1e-8678.15Show/hide
Query:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHL
        MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA  PP PSPLSNHIPFS LH Q    SQ+PK+SNP P +TV +MVKSKPHL
Subjt:  MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHL

Query:  QKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKV
        QK+ASGGDEKLSK+C+E+G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+S    QVELADI AKNGVKV
Subjt:  QKMASGGDEKLSKMCRELGGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKV

Query:  VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Subjt:  VSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20110.1 Dynein light chain type 1 family protein3.5e-0551.22Show/hide
Query:  VKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
        V++++ DMP  MQ HA  CAR   DS+EKF+SK +A +LK+
Subjt:  VKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAACCCACCAACCAGCTGCGCATCTTAGCGCCTCCTGACCCTGATTCTCCTCCTTTTAAAGCCCCTTTCAGAGCTCCTTCCTCTGATTCAATGGCTAATCTCTC
CACCTCTGCAAAACTTGAATCCACCATGGCTGCTGCTCCTCCTAAGCCCTCTCCCTTGTCCAACCACATCCCATTTTCGAGACTGCACAGTCAAACGGTGGTTTCATCTC
AAAGGCCAAAGAGTTCGAACCCAGCTCCAGTTGTGACTGTTTCTTCTATGGTCAAATCAAAACCCCACCTCCAGAAAATGGCTTCTGGTGGGGATGAGAAATTGAGTAAG
ATGTGTAGAGAGTTGGGTGGGAAGAAGTTTTTTGATGAGAAGAATGGGGTTGATGATGGGAAAGGTCTCTGTCTTGTGGTGAAGGAGAAGGAGAAGGAGAAGGAATTGAA
AGAGCCTCAAAAGGGGCATCGTCTTGACAGTTTGAGACCAACAGTTTCTTTACTTCGAAAGGGTGGGAGAAGAAAGTCCTTTCCTGGCTCTCAAGTTGAATTGGCTGATA
TCTTTGCCAAAAATGGCGTGAAAGTGGTTTCTGTTGACATGCCACCAGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACT
TCCAAGACACTTGCTTTATCTCTCAAGAGGGTAATTAGTTTAAGGAATTTGATGGGGTATACGGTCCGGCCTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAACCCACCAACCAGCTGCGCATCTTAGCGCCTCCTGACCCTGATTCTCCTCCTTTTAAAGCCCCTTTCAGAGCTCCTTCCTCTGATTCAATGGCTAATCTCTC
CACCTCTGCAAAACTTGAATCCACCATGGCTGCTGCTCCTCCTAAGCCCTCTCCCTTGTCCAACCACATCCCATTTTCGAGACTGCACAGTCAAACGGTGGTTTCATCTC
AAAGGCCAAAGAGTTCGAACCCAGCTCCAGTTGTGACTGTTTCTTCTATGGTCAAATCAAAACCCCACCTCCAGAAAATGGCTTCTGGTGGGGATGAGAAATTGAGTAAG
ATGTGTAGAGAGTTGGGTGGGAAGAAGTTTTTTGATGAGAAGAATGGGGTTGATGATGGGAAAGGTCTCTGTCTTGTGGTGAAGGAGAAGGAGAAGGAGAAGGAATTGAA
AGAGCCTCAAAAGGGGCATCGTCTTGACAGTTTGAGACCAACAGTTTCTTTACTTCGAAAGGGTGGGAGAAGAAAGTCCTTTCCTGGCTCTCAAGTTGAATTGGCTGATA
TCTTTGCCAAAAATGGCGTGAAAGTGGTTTCTGTTGACATGCCACCAGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACT
TCCAAGACACTTGCTTTATCTCTCAAGAGGGTAATTAGTTTAAGGAATTTGATGGGGTATACGGTCCGGCCTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTG
A
Protein sequenceShow/hide protein sequence
MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMANLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSK
MCRELGGKKFFDEKNGVDDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFT
SKTLALSLKRVISLRNLMGYTVRPGTASWGQVLGLL