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Spg036188 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036188
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationscaffold5:44192276..44195662
RNA-Seq ExpressionSpg036188
SyntenySpg036188
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584155.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia]5.2e-3175.51Show/hide
Query:  TQSSLVSQRSKYFFLDIL-PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
        TQ +   QRSK+FF   + PH   PF  E KFR+T  L TFP +LG MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Subjt:  TQSSLVSQRSKYFFLDIL-PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG

XP_008439824.1 PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo]3.2e-28100Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_020163946.1 protein transport protein Sec61 subunit gamma [Aegilops tauschii subsp. strangulata]4.2e-2898.55Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022137357.1 uncharacterized protein LOC111008832 isoform X1 [Momordica charantia]1.0e-3484.54Show/hide
Query:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        P GH    PE K     R LTF S+LG MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022137358.1 uncharacterized protein LOC111008832 isoform X2 [Momordica charantia]1.0e-3484.54Show/hide
Query:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        P GH    PE K     R LTF S+LG MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A287TRG3 Uncharacterized protein5.3e-2998.57Show/hide
Query:  AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A287XTR8 Uncharacterized protein1.2e-2898.57Show/hide
Query:  AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A453NIA0 Uncharacterized protein3.1e-2993.33Show/hide
Query:  PSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        P+   AMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  PSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1C817 uncharacterized protein LOC111008832 isoform X14.9e-3584.54Show/hide
Query:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        P GH    PE K     R LTF S+LG MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1CA50 uncharacterized protein LOC111008832 isoform X24.9e-3584.54Show/hide
Query:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        P GH    PE K     R LTF S+LG MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  PHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-11.8e-2994.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-21.8e-2994.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma1.2e-3098.55Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma1.0e-2175Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-31.3e-2788.24Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein8.9e-2988.24Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein1.2e-3094.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein1.2e-3094.12Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAAGGGTATTTACGGGAATTCAAATATTGCGACAGTCCATCAATTTTGACCCAATCTTCCCTAGTCTCGCAGCGCTCAAAGTATTTCTTCCTTGATATACTCCC
ACACGGCCACAAACCCTTCAATCCCGAAATCAAATTTCGCGAAACAATTCGATTGTTGACGTTCCCTTCGTATCTCGGAGCAATGGATGCCGTAGATTCCGTCGTCGATC
CTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTCAAGAGGTGTCACAAACCCGATCGGAAGGAATTCACCAAGGTTGCCGTACGTACCGCCATCGGCTTCGTTGTG
ATGGGATTCGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAACATCATCGTCGGATCTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCAAGGGTATTTACGGGAATTCAAATATTGCGACAGTCCATCAATTTTGACCCAATCTTCCCTAGTCTCGCAGCGCTCAAAGTATTTCTTCCTTGATATACTCCC
ACACGGCCACAAACCCTTCAATCCCGAAATCAAATTTCGCGAAACAATTCGATTGTTGACGTTCCCTTCGTATCTCGGAGCAATGGATGCCGTAGATTCCGTCGTCGATC
CTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTCAAGAGGTGTCACAAACCCGATCGGAAGGAATTCACCAAGGTTGCCGTACGTACCGCCATCGGCTTCGTTGTG
ATGGGATTCGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAACATCATCGTCGGATCTGGTTAG
Protein sequenceShow/hide protein sequence
MIQGYLREFKYCDSPSILTQSSLVSQRSKYFFLDILPHGHKPFNPEIKFRETIRLLTFPSYLGAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV
MGFVGFFVKLIFIPINNIIVGSG