; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036191 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036191
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationscaffold5:44572671..44574920
RNA-Seq ExpressionSpg036191
SyntenySpg036191
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055297.1 RPM1-interacting protein 4 isoform X1 [Cucumis melo var. makuwa]2.9e-2986.84Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTGTAANMV  +RNE  +NNESYPQRGGFAV EATVVSGS
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
TYJ99221.1 RPM1-interacting protein 4 isoform X1 [Cucumis melo var. makuwa]1.1e-2885.53Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  +RNE  +NNESYPQRGGFAV EATVVSGS
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]7.0e-2385.94Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  +RNE  +NNESYPQ
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
XP_022137179.1 uncharacterized protein LOC111008714 isoform X1 [Momordica charantia]7.0e-2388.52Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQRNE+ YNNE++PQ
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
XP_022954832.1 RPM1-interacting protein 4-like [Cucurbita moschata]3.1e-2387.5Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ ANMVS Q NE  YNNES+PQ
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
TrEMBL top hitse value%identityAlignment
A0A1S3AZ04 RPM1-interacting protein 4 isoform X13.4e-2385.94Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  +RNE  +NNESYPQ
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
A0A5A7UL43 RPM1-interacting protein 4 isoform X11.4e-2986.84Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTGTAANMV  +RNE  +NNESYPQRGGFAV EATVVSGS
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
A0A5D3BKG8 RPM1-interacting protein 4 isoform X15.4e-2985.53Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  +RNE  +NNESYPQRGGFAV EATVVSGS
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS
A0A6J1C6I4 uncharacterized protein LOC111008714 isoform X13.4e-2388.52Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQRNE+ YNNE++PQ
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
A0A6J1GRZ4 RPM1-interacting protein 4-like1.5e-2387.5Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ ANMVS Q NE  YNNES+PQ
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQ
SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.1e-1494.74Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
Q8GYN5 RPM1-interacting protein 42.8e-0642.37Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNES
        S +K   +PKFG+WD NNP+SA+G+T IFNK R+E+    + AN+    R  T  ++ +
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNES
Arabidopsis top hitse value%identityAlignment
AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein1.1e-1561.54Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA----NMVSPQRNETDYNNES
        MA+ ++ RPLPKFGEWD  NP SAEGFTVIFNKARD+KKT  TA     ++VSP RNE    N +
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA----NMVSPQRNETDYNNES
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.5e-1594.74Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.1e-1592.31Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.1e-1592.31Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.0e-1665.67Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGTAAN-MVSPQRNE-TDYNNESYPQ
        +++KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   +G   N +VSPQRN+ +D NN    Q
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGTAAN-MVSPQRNE-TDYNNESYPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACGGTAATATTTAACAAGGCTAGAGATGA
GAAGAAGACTACTGGAACTGCTGCTAATATGGTTTCACCACAAAGAAATGAAACTGACTATAACAATGAAAGTTACCCTCAAAGAGGTGGTTTTGCTGTGTTTGAAGCCA
CAGTGGTTTCAGGATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACGGTAATATTTAACAAGGCTAGAGATGA
GAAGAAGACTACTGGAACTGCTGCTAATATGGTTTCACCACAAAGAAATGAAACTGACTATAACAATGAAAGTTACCCTCAAAGAGGTGGTTTTGCTGTGTTTGAAGCCA
CAGTGGTTTCAGGATCTTGA
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQRGGFAVFEATVVSGS