; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036264 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036264
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like
Genome locationscaffold5:47113326..47119250
RNA-Seq ExpressionSpg036264
SyntenySpg036264
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137466.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]1.9e-8093.04Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRVPL PN FF  T+PGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_008456997.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucumis melo]5.0e-8193.67Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRVPL PN FF  T+PGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022136971.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Momordica charantia]2.2e-8498.1Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRVPL PNHFFN TRPGDKYYFHKQCRNRS LMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022994956.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]7.3e-8093.04Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGR+PL P HFFN TRPGDKYYFHKQCRNRSIL MLSVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK APPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_038894047.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Benincasa hispida]1.3e-8194.3Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRV L PNHFF+ T+PGDKYYFHKQCRNRS+LMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK RKT+PPYRVLLHNDNYNKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

TrEMBL top hitse value%identityAlignment
A0A0A0LSY6 ClpS domain-containing protein9.3e-8193.04Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRVPL PN FF  T+PGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A1S3C561 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like2.4e-8193.67Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRVPL PN FF  T+PGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1C511 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X11.1e-8498.1Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGRVPL PNHFFN TRPGDKYYFHKQCRNRS LMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1GS56 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.3e-7992.41Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGR+PL P HFFN TRPGDKYYFHKQCRNRSIL MLSVAELGKGGGLLEKP  EKTTPGRESEF+VRKSRK APPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1K0P0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like3.5e-8093.04Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL
        MEAAICGR+PL P HFFN TRPGDKYYFHKQCRNRSIL MLSVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK APPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.5e-2252.29Show/hide
Query:  GGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLS
        GG+++ PT   TT  ++    V +S+K  P Y+VLLHNDNYNKREYVV+VL+KV+  +T+D+AV  MQEAH  G+++V+ C Q +AE +C  LR NGL S
Subjt:  GGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLS

Query:  SIEPASDGC
        +IEP   GC
Subjt:  SIEPASDGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS2.8e-1858.23Show/hide
Query:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEP
        RK AP YRVLLHND++N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL SSIEP
Subjt:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS1.6e-1342.16Show/hide
Query:  EKPTIEKTTPGRESEFD--VRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSI
        E PT    +PG  +  D    + RK +P Y+VLLHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ +VI+C    AE +C  L+  GL SSI
Subjt:  EKPTIEKTTPGRESEFD--VRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSI

Query:  EP
        EP
Subjt:  EP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.3e-1556.16Show/hide
Query:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGL
        RK AP YRVLLHND++N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL
Subjt:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.4e-6274.38Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHK-QCRNRSILMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQ
        ME AICGR+ L P+  FN ++ GDK+   K  C NRSILM LS  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K APPYRV+LHNDN+NKREYVVQ
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHK-QCRNRSILMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQ

Query:  VLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMKVIPGMT+DNAVNIMQEAH NG++VVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.7e-6374.38Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHK-QCRNRSILMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQ
        ME AICGR+ L P+  FN ++ GDK+   K  C NRSILM LS  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K APPYRV+LHNDN+NKREYVVQ
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHK-QCRNRSILMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQ

Query:  VLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMKVIPGMT+DNAVNIMQEAH NG++VVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein4.4e-4358.75Show/hide
Query:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHK-QCRNRSILMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQ
        ME AICGR+ L P+  FN ++ GDK+   K  C NRSILM LS  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K APPYRV+LHNDN+NKREYVVQ
Subjt:  MEAAICGRVPLPPNHFFNPTRPGDKYYFHK-QCRNRSILMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQ

Query:  VLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMK                               DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTCCACCCAACCATTTCTTCAATCCGACCAGGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGCAT
CTTAATGATGCTTTCAGTTGCTGAGCTCGGAAAAGGTGGAGGGTTGTTAGAAAAGCCAACCATAGAGAAGACAACACCTGGCCGTGAATCTGAGTTTGATGTTAGGAAAT
CGAGGAAAACTGCTCCGCCTTACCGCGTGTTGCTACACAACGACAATTACAACAAGCGGGAATATGTTGTGCAAGTTCTGATGAAGGTGATCCCTGGAATGACACTTGAC
AATGCAGTCAACATAATGCAGGAGGCACATTACAATGGGATGTCAGTGGTAATTATCTGCGCTCAAGTGGATGCAGAAGATCACTGCATGCAGCTGAGAGGCAATGGTCT
TCTAAGTTCAATTGAGCCTGCAAGTGACGGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTCCACCCAACCATTTCTTCAATCCGACCAGGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGCAT
CTTAATGATGCTTTCAGTTGCTGAGCTCGGAAAAGGTGGAGGGTTGTTAGAAAAGCCAACCATAGAGAAGACAACACCTGGCCGTGAATCTGAGTTTGATGTTAGGAAAT
CGAGGAAAACTGCTCCGCCTTACCGCGTGTTGCTACACAACGACAATTACAACAAGCGGGAATATGTTGTGCAAGTTCTGATGAAGGTGATCCCTGGAATGACACTTGAC
AATGCAGTCAACATAATGCAGGAGGCACATTACAATGGGATGTCAGTGGTAATTATCTGCGCTCAAGTGGATGCAGAAGATCACTGCATGCAGCTGAGAGGCAATGGTCT
TCTAAGTTCAATTGAGCCTGCAAGTGACGGTTGTTGA
Protein sequenceShow/hide protein sequence
MEAAICGRVPLPPNHFFNPTRPGDKYYFHKQCRNRSILMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLD
NAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC