CuGenDBv2

Gene ID	Spg036285
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transcription termination factor 4
Genome location	scaffold5:44993927..44996256
RNA-Seq Expression	Spg036285
Synteny	Spg036285
Gene Ontology terms	GO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint (biological process) GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domains	IPR026182 - Anaphase-promoting complex subunit 15

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152491.1 uncharacterized protein LOC101206898 [Cucumis sativus]

4.8e-42

95.88

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

XP_008438807.1 PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo]

2.0e-43

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

XP_018813880.1 uncharacterized protein LOC108985877 [Juglans regia]

2.7e-37

89.8

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDV--EAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQP +EELLLAMEESDFEEKCNEIRKTNSNLVVIGK T DNDKED   +A+DDDADNAEESE EEFEQET
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDV--EAEDDDADNAEESEAEEFEQET

XP_022137094.1 uncharacterized protein LOC111008654 [Momordica charantia]

8.2e-42

96.88

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKM+ADNDKED+EAEDDDADN EESEAEEFEQET
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQET

XP_038894516.1 uncharacterized protein LOC120083062 [Benincasa hispida]

4.8e-42

96.91

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKM ADNDKED+EAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWF0 Uncharacterized protein

2.3e-42

95.88

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

A0A1S3AXA5 uncharacterized protein LOC103483797

9.5e-44

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

A0A5A7UJS1 Transcription termination factor 4

9.5e-44

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

A0A6J1GSM6 uncharacterized protein LOC111456762

9.5e-44

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

A0A6J1JWJ6 uncharacterized protein LOC111490324

9.5e-44

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKED+EAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63135.1 unknown protein

2.4e-31

72.73

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKE--DVEAEDDDADNAEESEAEEFEQETG
        MLQFP  MTQ+P ST+TIP S+LLP QWPQPQNEE+LLAMEE++FEEKCNEIRK +  L VIGK   +N++E  D EAEDDDADNAEES+ EEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKE--DVEAEDDDADNAEESEAEEFEQETG

Sequences

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CDS sequence

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ATGCTGCAGTTTCCGGCTTTCATGACCCAATACCCTTGGTCTACAAGGACTATTCCGACGTCGTTTTTACTGCCGTCTCAATGGCCCCAACCCCAAAACGAAGAGCTACT
GCTCGCCATGGAAGAGTCTGATTTCGAAGAAAAGTGCAATGAAATCAGGAAGACAAACAGCAACCTGGTGGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGATG
TGGAGGCTGAAGATGACGACGCTGACAATGCTGAGGAGTCTGAGGCTGAAGAATTTGAGCAGGAAACTGGTTAA

mRNA sequence

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Protein sequence

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MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDVEAEDDDADNAEESEAEEFEQETG

Spg036285 (gene) of Sponge gourd (cylindrica) v1 genome