; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036292 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036292
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionB-box type zinc finger family protein
Genome locationscaffold5:42288090..42290261
RNA-Seq ExpressionSpg036292
SyntenySpg036292
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger
IPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573228.1 putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4569.29Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN
        MKKKCELC SRANTYCESDQA+LCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL PT+SVCQ C+NAQ      N++  +H+DS HG+   
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN

Query:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR
                         D +DDDENQVVPLSPPPVSSSS+
Subjt:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR

XP_022954438.1 zinc finger protein CONSTANS-LIKE 9-like [Cucurbita moschata]1.4e-4065.71Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN
        MKKKCELC SRANTYCESDQA+LCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL PT+SVCQ C+NAQ      N++  +H+DS       
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN

Query:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR
                           DDD+E QVVPLSP PVSSSS+
Subjt:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR

XP_022994111.1 zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima]5.2e-4369.29Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN
        MKKKCELC SRANTYCESDQA+LCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATGRKL PT+SVCQ C+NAQ      N++  +H+DS  G+   
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN

Query:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR
            RDD          D ++DDENQVVPLSPPPVSSSS+
Subjt:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR

XP_023542180.1 zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo]1.8e-4367.14Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN
        MK KCELC SRANTYCESDQA+LCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL PT+SVCQ C+NAQ      N++  +H+DS  G+  +
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN

Query:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR
        +                  +DDDENQVVPLSPPPVSSSS+
Subjt:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR

XP_038895968.1 zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida]2.0e-3964.71Show/hide
Query:  SDAHERQSARFESKIMKK-KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHN
        SD++ R     E KIMKK KCELC+ RAN YCESDQASLCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KLGPT+S+CQFCV  QNV SL  
Subjt:  SDAHERQSARFESKIMKK-KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHN

Query:  HLLQDHRDSRHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSS
        H    H++ RH     SS  RD       A      DD++NQVVP+SPPP SS
Subjt:  HLLQDHRDSRHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSS

TrEMBL top hitse value%identityAlignment
A0A0A0LS80 B box-type domain-containing protein5.4e-3867.16Show/hide
Query:  KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDENSSP
        KCELC+ RAN YCESD++SLCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KLGPTLS+CQ CV  QNVASL       H+D  H     SS 
Subjt:  KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDENSSP

Query:  GRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSS
         RD             +DD+ENQVVPLSPPPVSS
Subjt:  GRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSS

A0A1S3B4I3 B-box zinc finger protein 32-like8.4e-3963.64Show/hide
Query:  SDAHERQSARFESKIMKK-KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHN
        S   E      E KIMK  KCELC+ RAN YCESD+ASLCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTATG KLGPTLS+CQFCV  QNVASL  
Subjt:  SDAHERQSARFESKIMKK-KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHN

Query:  HLLQDHRDSRHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSS
        H    H+D  H     SS  RD       +      DD+ENQVVPLSPPP  SS
Subjt:  HLLQDHRDSRHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSS

A0A5A7UTR2 B-box zinc finger protein 32-like8.4e-3963.64Show/hide
Query:  SDAHERQSARFESKIMKK-KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHN
        S   E      E KIMK  KCELC+ RAN YCESD+ASLCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTATG KLGPTLS+CQFCV  QNVASL  
Subjt:  SDAHERQSARFESKIMKK-KCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHN

Query:  HLLQDHRDSRHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSS
        H    H+D  H     SS  RD       +      DD+ENQVVPLSPPP  SS
Subjt:  HLLQDHRDSRHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSS

A0A6J1GR34 zinc finger protein CONSTANS-LIKE 9-like6.8e-4165.71Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN
        MKKKCELC SRANTYCESDQA+LCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL PT+SVCQ C+NAQ      N++  +H+DS       
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN

Query:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR
                           DDD+E QVVPLSP PVSSSS+
Subjt:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR

A0A6J1JY69 zinc finger protein CONSTANS-LIKE 9-like2.5e-4369.29Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN
        MKKKCELC SRANTYCESDQA+LCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATGRKL PT+SVCQ C+NAQ      N++  +H+DS  G+   
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDEN

Query:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR
            RDD          D ++DDENQVVPLSPPPVSSSS+
Subjt:  SSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSR

SwissProt top hitse value%identityAlignment
O23379 Putative zinc finger protein CONSTANS-LIKE 111.1e-0839.33Show/hide
Query:  MKKKCELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRKLGPTLSVCQFCV-NAQNVASLHNHL
        M+ +C+ C   +A  YC+SD A LC +CD NVHSAN + ++H+R+LLC  C   PT        +   +S+CQ C   A N   L + L
Subjt:  MKKKCELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRKLGPTLSVCQFCV-NAQNVASLHNHL

Q1G3I2 B-box domain protein 303.3e-0835.63Show/hide
Query:  ESKIMKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLH
        ES      CELC   A  YCE+D A LC  CD  VHSANF+  +H R ++C  C+  T     G      L   +     +  +S H
Subjt:  ESKIMKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLH

Q9LJ44 Zinc finger protein CONSTANS-LIKE 124.3e-0840.45Show/hide
Query:  MKKKCELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQ
        M+ KC+ C  S+A  YC+SD A LC +CD +VHSAN +  +H R+L+C  C S     A  R L   +S CQ C   ++  S   H +Q
Subjt:  MKKKCELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQ

Q9LUA9 Zinc finger protein CONSTANS-LIKE 101.0e-0947.14Show/hide
Query:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC
        C+ C E R+  YC SD A LC SCD NVHSAN + ++HSRTL+C  C +     A+ R     +S+CQ C
Subjt:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC

Q9SSE5 Zinc finger protein CONSTANS-LIKE 97.9e-1047.14Show/hide
Query:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC
        C+ C E R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ C
Subjt:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC

Arabidopsis top hitse value%identityAlignment
AT3G07650.1 CONSTANS-like 95.6e-1147.14Show/hide
Query:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC
        C+ C E R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ C
Subjt:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC

AT3G07650.2 CONSTANS-like 95.6e-1147.14Show/hide
Query:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC
        C+ C E R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ C
Subjt:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC

AT3G07650.3 CONSTANS-like 95.6e-1147.14Show/hide
Query:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC
        C+ C E R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ C
Subjt:  CELC-ESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFC

AT4G27310.1 B-box type zinc finger family protein3.5e-2946.75Show/hide
Query:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNV-ASLHNHLLQDHR--DSRHGF
        M KKC+LC   A  YCESDQASLCW CD  VH ANF+V KH+R LLC  CQS TPW ATG +LGPT SVC+ CV  +N      N +L ++R  +  + F
Subjt:  MKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNV-ASLHNHLLQDHR--DSRHGF

Query:  DENSSPGRDDGGAGDPAAAADKD---------------DDD--------ENQVVPLSP----PPVSSSS
        +      R+D G GD A + D D               DDD        ENQVVP S     PPV SSS
Subjt:  DENSSPGRDDGGAGDPAAAADKD---------------DDD--------ENQVVPLSP----PPVSSSS

AT5G54470.1 B-box type zinc finger family protein3.6e-2646.31Show/hide
Query:  KKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDENS
        KKKCELC   A  YCESDQASLCW CD  VH ANF+V KH R LLC  CQS TPW A+G  LGPT+S+C+ C+  +          +++  S  G D+N 
Subjt:  KKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDSRHGFDENS

Query:  SPGRDDGGAGDPAAAADKDDDD-------ENQVVPLSP----PPVSSSS
        +   +  G  D A + D++ D+       ENQVVP +     P VSSSS
Subjt:  SPGRDDGGAGDPAAAADKDDDD-------ENQVVPLSP----PPVSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGGATCCGATGCCCACGAACGCCAATCCGCGAGATTCGAGTCCAAAATTATGAAGAAAAAGTGTGAGCTTTGCGAATCGAGAGCCAATACGTACTGTGAGTCGGACCA
AGCCAGCTTGTGTTGGAGCTGCGACGCCAATGTTCACTCGGCCAATTTCATCGTCGAAAAGCACTCCAGGACTTTGCTCTGCCATATTTGCCAATCCCCCACGCCTTGGA
CTGCCACTGGCCGCAAGCTCGGCCCCACTCTCTCCGTTTGTCAGTTTTGCGTTAATGCCCAAAACGTTGCCTCGCTACACAATCATCTCCTCCAGGATCATCGCGATTCT
CGTCATGGGTTCGATGAAAATAGCTCCCCCGGCAGAGACGATGGTGGCGCTGGTGATCCTGCTGCTGCTGCTGATAAGGATGATGATGATGAGAATCAAGTGGTTCCGCT
GTCGCCGCCGCCGGTTTCCAGCTCGTCCAGAACCCTGGAAGCCATGGCGATCTTGGAGGGACTGACCTGCAAAGTCGACGAAAGCAGAAAGAGTAGAATGCTCATTGACA
TTGAATCTGATTCACCCGAAATTGTGAATATCCTTACTGGAATTTCTAAGGACTTATCGGAGACCAAAAACATCACGAACGCGATCTCGGAGATTCTGTCAATGGCCTCA
TCTCCGGGAGATCTCACCGTCGGGCACTGCAATAGGCGAGCTAATACCTTAGCCCATTGTATCACTCGATTAGGAGCTCATTCCCCTGCTTTTTTGCCTTCCATTTTGAT
TTAG
mRNA sequenceShow/hide mRNA sequence
AAGGGATCCGATGCCCACGAACGCCAATCCGCGAGATTCGAGTCCAAAATTATGAAGAAAAAGTGTGAGCTTTGCGAATCGAGAGCCAATACGTACTGTGAGTCGGACCA
AGCCAGCTTGTGTTGGAGCTGCGACGCCAATGTTCACTCGGCCAATTTCATCGTCGAAAAGCACTCCAGGACTTTGCTCTGCCATATTTGCCAATCCCCCACGCCTTGGA
CTGCCACTGGCCGCAAGCTCGGCCCCACTCTCTCCGTTTGTCAGTTTTGCGTTAATGCCCAAAACGTTGCCTCGCTACACAATCATCTCCTCCAGGATCATCGCGATTCT
CGTCATGGGTTCGATGAAAATAGCTCCCCCGGCAGAGACGATGGTGGCGCTGGTGATCCTGCTGCTGCTGCTGATAAGGATGATGATGATGAGAATCAAGTGGTTCCGCT
GTCGCCGCCGCCGGTTTCCAGCTCGTCCAGAACCCTGGAAGCCATGGCGATCTTGGAGGGACTGACCTGCAAAGTCGACGAAAGCAGAAAGAGTAGAATGCTCATTGACA
TTGAATCTGATTCACCCGAAATTGTGAATATCCTTACTGGAATTTCTAAGGACTTATCGGAGACCAAAAACATCACGAACGCGATCTCGGAGATTCTGTCAATGGCCTCA
TCTCCGGGAGATCTCACCGTCGGGCACTGCAATAGGCGAGCTAATACCTTAGCCCATTGTATCACTCGATTAGGAGCTCATTCCCCTGCTTTTTTGCCTTCCATTTTGAT
TTAG
Protein sequenceShow/hide protein sequence
KGSDAHERQSARFESKIMKKKCELCESRANTYCESDQASLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLGPTLSVCQFCVNAQNVASLHNHLLQDHRDS
RHGFDENSSPGRDDGGAGDPAAAADKDDDDENQVVPLSPPPVSSSSRTLEAMAILEGLTCKVDESRKSRMLIDIESDSPEIVNILTGISKDLSETKNITNAISEILSMAS
SPGDLTVGHCNRRANTLAHCITRLGAHSPAFLPSILI