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Spg036293 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036293
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:48785935..48793327
RNA-Seq ExpressionSpg036293
SyntenySpg036293
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH00699.1 VIRB2-interacting protein 2 [Prunus dulcis]7.9e-1237.59Show/hide
Query:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL
        GVL  VFP LF LS + N  ++ F  +  ++  WD   RRNLN+LE  E   L  LL  + L T+  D   W  DPS  FT  SL   +    +  +   
Subjt:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL

Query:  YEAIWKDVHPKKIKILLWELSLGAIIRKRTVVD
        Y  IWK   P K+KI +W+  LG  I  R   D
Subjt:  YEAIWKDVHPKKIKILLWELSLGAIIRKRTVVD

KAE8689350.1 Pescadillo-like protein [Hibiscus syriacus]2.3e-1136.03Show/hide
Query:  FPHLFKLSNRPNGKVADF--WVTSNVVWDLSLRRNLNDLETNEWPNLSHLLSSINLQ-TNGDTWSWPIDPSNSFTVKSLMG---DMVGASDPTSNNLYEA
        FP LF LSN   GKVA+F  +  S  VWD+  +RNL D E  +W  L  LL+S +L     D W W       FT KS M    D  G +D    N    
Subjt:  FPHLFKLSNRPNGKVADF--WVTSNVVWDLSLRRNLNDLETNEWPNLSHLLSSINLQ-TNGDTWSWPIDPSNSFTVKSLMG---DMVGASDPTSNNLYEA

Query:  IWKDVHPKKIKILLWELSLGAIIRKRTVVDRGERAV
        +WK V P +++  +W+L+   +  K  ++ RG   V
Subjt:  IWKDVHPKKIKILLWELSLGAIIRKRTVVDRGERAV

TYK09967.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]6.4e-1440Show/hide
Query:  VLALVFPHLFKLSNRPNGKVADFWVTSNVVWDLSLRRNLNDLETNE---------WPNLSHLLSSINLQTNGDTWSWPIDPSNSFTVKSLMGDMVGASDP
        V  ++  +L   S+   G+     V   VVW++  R  +  LE  +           NLSHLLS I +    D WSWP+DPSN F+VKSL+  +VG    
Subjt:  VLALVFPHLFKLSNRPNGKVADFWVTSNVVWDLSLRRNLNDLETNE---------WPNLSHLLSSINLQTNGDTWSWPIDPSNSFTVKSLMGDMVGASDP

Query:  TSNNLYEAIWKDVHPKKIKILLWELSLGAI
        +S+NLY  IW + +PKKI I L ELSLG +
Subjt:  TSNNLYEAIWKDVHPKKIKILLWELSLGAI

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]1.0e-1137.6Show/hide
Query:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL
        GVL  VFP LF LS + N  ++ F  +  ++  WD   RRNLN+LE  E   L  LL  + L T+  D   W  DPS  FT  SL   +    +  +   
Subjt:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL

Query:  YEAIWKDVHPKKIKILLWELSLGAI
        Y  IWK   P K+KI +W+  LG +
Subjt:  YEAIWKDVHPKKIKILLWELSLGAI

VVA33204.1 PREDICTED: ribonuclease H [Prunus dulcis]6.0e-1237.6Show/hide
Query:  GVLALVFPHLFKLSNRPNGKVADFWVTSN--VVWDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL
        GVL  VFP LF LS + N  ++ F  +    + WD   RRNLN+LE  E   L  LL  + L T+  D   W +DPS  FT  SL   +    +    + 
Subjt:  GVLALVFPHLFKLSNRPNGKVADFWVTSN--VVWDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL

Query:  YEAIWKDVHPKKIKILLWELSLGAI
        Y  IWK   P K+KI +W+  LG +
Subjt:  YEAIWKDVHPKKIKILLWELSLGAI

TrEMBL top hitse value%identityAlignment
A0A4Y1R938 VIRB2-interacting protein 23.8e-1237.59Show/hide
Query:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL
        GVL  VFP LF LS + N  ++ F  +  ++  WD   RRNLN+LE  E   L  LL  + L T+  D   W  DPS  FT  SL   +    +  +   
Subjt:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL

Query:  YEAIWKDVHPKKIKILLWELSLGAIIRKRTVVD
        Y  IWK   P K+KI +W+  LG  I  R   D
Subjt:  YEAIWKDVHPKKIKILLWELSLGAIIRKRTVVD

A0A5D3CDA3 Calpain-type cysteine protease DEK13.1e-1440Show/hide
Query:  VLALVFPHLFKLSNRPNGKVADFWVTSNVVWDLSLRRNLNDLETNE---------WPNLSHLLSSINLQTNGDTWSWPIDPSNSFTVKSLMGDMVGASDP
        V  ++  +L   S+   G+     V   VVW++  R  +  LE  +           NLSHLLS I +    D WSWP+DPSN F+VKSL+  +VG    
Subjt:  VLALVFPHLFKLSNRPNGKVADFWVTSNVVWDLSLRRNLNDLETNE---------WPNLSHLLSSINLQTNGDTWSWPIDPSNSFTVKSLMGDMVGASDP

Query:  TSNNLYEAIWKDVHPKKIKILLWELSLGAI
        +S+NLY  IW + +PKKI I L ELSLG +
Subjt:  TSNNLYEAIWKDVHPKKIKILLWELSLGAI

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)5.0e-1237.6Show/hide
Query:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL
        GVL  VFP LF LS + N  ++ F  +  ++  WD   RRNLN+LE  E   L  LL  + L T+  D   W  DPS  FT  SL   +    +  +   
Subjt:  GVLALVFPHLFKLSNRPNGKVADFWVTSNVV--WDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL

Query:  YEAIWKDVHPKKIKILLWELSLGAI
        Y  IWK   P K+KI +W+  LG +
Subjt:  YEAIWKDVHPKKIKILLWELSLGAI

A0A5E4G0J2 PREDICTED: ribonuclease H2.9e-1237.6Show/hide
Query:  GVLALVFPHLFKLSNRPNGKVADFWVTSN--VVWDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL
        GVL  VFP LF LS + N  ++ F  +    + WD   RRNLN+LE  E   L  LL  + L T+  D   W +DPS  FT  SL   +    +    + 
Subjt:  GVLALVFPHLFKLSNRPNGKVADFWVTSN--VVWDLSLRRNLNDLETNEWPNLSHLLSSINLQTNG-DTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNL

Query:  YEAIWKDVHPKKIKILLWELSLGAI
        Y  IWK   P K+KI +W+  LG +
Subjt:  YEAIWKDVHPKKIKILLWELSLGAI

A0A6A2ZCZ2 Pescadillo homolog1.1e-1136.03Show/hide
Query:  FPHLFKLSNRPNGKVADF--WVTSNVVWDLSLRRNLNDLETNEWPNLSHLLSSINLQ-TNGDTWSWPIDPSNSFTVKSLMG---DMVGASDPTSNNLYEA
        FP LF LSN   GKVA+F  +  S  VWD+  +RNL D E  +W  L  LL+S +L     D W W       FT KS M    D  G +D    N    
Subjt:  FPHLFKLSNRPNGKVADF--WVTSNVVWDLSLRRNLNDLETNEWPNLSHLLSSINLQ-TNGDTWSWPIDPSNSFTVKSLMG---DMVGASDPTSNNLYEA

Query:  IWKDVHPKKIKILLWELSLGAIIRKRTVVDRGERAV
        +WK V P +++  +W+L+   +  K  ++ RG   V
Subjt:  IWKDVHPKKIKILLWELSLGAIIRKRTVVDRGERAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACGCTGGCAGTAAATCAACAAATCTTGGGAGACAATAGAATAGCAATAAACCCAAGAAATCCTCAAGAAAACCAAGACAGATTGGTGGCTGGAGCAAGTAACCT
CCAAGAAAACAGAAATGGAGTTGTTGTTCCTCCAAGAAGACCAGCCAATGCTGAAATTGAAACAATCCCTGAAGCATTCATGCCCGGTTTCATGACACAAGACTCGAATT
TGTCAGGAGAAGACGAAATTGTTGATTACGGTCATCAAGATCAACAACCAAGAGCTCCAAGAAGGCAACAAGATGAATATCTGGAGTTTCTTCAGAAATCCTCATTTTCC
TTGCTTCCTTTTCAGTTGGTTTCTTCAGCCGCTTGGGGTTTTGATCGCTTCTCCGATTTTGATCGATTTGCTGTTTTCGTATTCAGAGATGTCTTGGCAATGGTCGTTCT
ACTATTTTTTGGCATGATTCTTGGTTTGAATTGTGGGGTCCTCGCTTTGGTTTTCCCTCATCTTTTTAAATTATCAAATCGTCCAAATGGTAAGGTTGCTGACTTTTGGG
TTACATCTAATGTCGTTTGGGACTTGAGCCTTCGACGTAACCTAAATGATTTGGAGACAAATGAATGGCCAAATCTTTCTCATTTACTTTCTTCAATCAATCTACAAACT
AATGGTGACACTTGGTCTTGGCCTATTGATCCATCTAATTCTTTTACAGTCAAATCTCTTATGGGAGATATGGTTGGGGCCTCTGATCCTACCTCCAACAATCTTTATGA
GGCGATTTGGAAAGATGTTCATCCCAAAAAGATAAAAATCCTTCTCTGGGAGCTTAGTCTTGGAGCTATAATACGCAAGCGTACGGTTGTTGATCGTGGTGAGAGGGCGG
TGGTAGGCTCCGCCTCTTTTCCAACCGAAGAGGAGTCTCCCATGACATTGGTTGAAACTCTCTTGGTTGCCATATTGATAGAGCCCAAAATCGCAATGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACGCTGGCAGTAAATCAACAAATCTTGGGAGACAATAGAATAGCAATAAACCCAAGAAATCCTCAAGAAAACCAAGACAGATTGGTGGCTGGAGCAAGTAACCT
CCAAGAAAACAGAAATGGAGTTGTTGTTCCTCCAAGAAGACCAGCCAATGCTGAAATTGAAACAATCCCTGAAGCATTCATGCCCGGTTTCATGACACAAGACTCGAATT
TGTCAGGAGAAGACGAAATTGTTGATTACGGTCATCAAGATCAACAACCAAGAGCTCCAAGAAGGCAACAAGATGAATATCTGGAGTTTCTTCAGAAATCCTCATTTTCC
TTGCTTCCTTTTCAGTTGGTTTCTTCAGCCGCTTGGGGTTTTGATCGCTTCTCCGATTTTGATCGATTTGCTGTTTTCGTATTCAGAGATGTCTTGGCAATGGTCGTTCT
ACTATTTTTTGGCATGATTCTTGGTTTGAATTGTGGGGTCCTCGCTTTGGTTTTCCCTCATCTTTTTAAATTATCAAATCGTCCAAATGGTAAGGTTGCTGACTTTTGGG
TTACATCTAATGTCGTTTGGGACTTGAGCCTTCGACGTAACCTAAATGATTTGGAGACAAATGAATGGCCAAATCTTTCTCATTTACTTTCTTCAATCAATCTACAAACT
AATGGTGACACTTGGTCTTGGCCTATTGATCCATCTAATTCTTTTACAGTCAAATCTCTTATGGGAGATATGGTTGGGGCCTCTGATCCTACCTCCAACAATCTTTATGA
GGCGATTTGGAAAGATGTTCATCCCAAAAAGATAAAAATCCTTCTCTGGGAGCTTAGTCTTGGAGCTATAATACGCAAGCGTACGGTTGTTGATCGTGGTGAGAGGGCGG
TGGTAGGCTCCGCCTCTTTTCCAACCGAAGAGGAGTCTCCCATGACATTGGTTGAAACTCTCTTGGTTGCCATATTGATAGAGCCCAAAATCGCAATGCTCTGA
Protein sequenceShow/hide protein sequence
MSTLAVNQQILGDNRIAINPRNPQENQDRLVAGASNLQENRNGVVVPPRRPANAEIETIPEAFMPGFMTQDSNLSGEDEIVDYGHQDQQPRAPRRQQDEYLEFLQKSSFS
LLPFQLVSSAAWGFDRFSDFDRFAVFVFRDVLAMVVLLFFGMILGLNCGVLALVFPHLFKLSNRPNGKVADFWVTSNVVWDLSLRRNLNDLETNEWPNLSHLLSSINLQT
NGDTWSWPIDPSNSFTVKSLMGDMVGASDPTSNNLYEAIWKDVHPKKIKILLWELSLGAIIRKRTVVDRGERAVVGSASFPTEEESPMTLVETLLVAILIEPKIAML