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Spg036302 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036302
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationscaffold5:47297464..47297973
RNA-Seq ExpressionSpg036302
SyntenySpg036302
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]5.3e-1249.44Show/hide
Query:  AAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPY
        AA+MVE+W+ M++ FCV+SAI IATVSV  +T+L   F  LSIA++ CF  +V A++I    + +S+ILYC+GG  + ++ F+A AIPY
Subjt:  AAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPY

KAF3947053.1 hypothetical protein CMV_026760 [Castanea mollissima]3.6e-0834.55Show/hide
Query:  ITGDIKNFFLQTLTA-----ARTWITSLIQPEPSDTDT--EAHRHPSTAAKMVE----KWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMAC
        +T   K FF+  +T      ++     L +P PS  +   +A      A  +VE    +W ++ +TFC+ASAI IA VSVQ  ++LS  F  LS+ ++  
Subjt:  ITGDIKNFFLQTLTA-----ARTWITSLIQPEPSDTDT--EAHRHPSTAAKMVE----KWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMAC

Query:  FAFIVSAKVIERQ--IVSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAIYLV-FLSIIILLC
        FA  V +K I+ +  + +Q+L   G F+ +TAFFMAI IP+ L+ +  ++A+Y +  L+I+I  C
Subjt:  FAFIVSAKVIERQ--IVSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAIYLV-FLSIIILLC

KAF3947054.1 hypothetical protein CMV_026761 [Castanea mollissima]6.1e-0838.46Show/hide
Query:  PEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIERQ--IVSQILYCIGGFWFVTAFFMA
        P  +      HRH     ++   W ++M+ FC+ASAI IA VSVQ + +LS  F  LS+A++  FA    ++ I+ +  + +Q+L  +G F+ VTAFFMA
Subjt:  PEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIERQ--IVSQILYCIGGFWFVTAFFMA

Query:  IAIPYSLHFQIITFAIYLV-FLSIIILLCY
        I IP+ L+ +  T+AIY +  L+I I  C+
Subjt:  IAIPYSLHFQIITFAIYLV-FLSIIILLCY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1853.04Show/hide
Query:  AAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIERQI--VSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAI
        AA+MVE+W+ M++ FCV+SAIAIATVSVQ E KL  +F FLS+ L+ CF F+   K+ +  +  VS+ILYC+GG   VTA F+A AIPY+ +FQII F I
Subjt:  AAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIERQI--VSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAI

Query:  YLVFLSIIILLCYFS
        YL+F  + +L+ + S
Subjt:  YLVFLSIIILLCYFS

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2853.25Show/hide
Query:  ITGDIKNFFLQTLTAARTWITS--------LIQPEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAF
        ++  I   F + L+ AR +I +        L+  E +    E    P +A +M+ +WE MM+TFC+ +AIAIATVSVQ +TKLSPMF FLS ALM CF F
Subjt:  ITGDIKNFFLQTLTAARTWITS--------LIQPEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAF

Query:  IVSAKVIERQIVSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAIYLVFLSI
          SAK+I+ Q VS ILY +GGF FVTAFF+AIAIPY+ HFQI+T A+YLVFL I
Subjt:  IVSAKVIERQIVSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAIYLVFLSI

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein9.4e-1547.41Show/hide
Query:  RHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPYSLHFQI
        R     A+MVE+ ++M++ FC++SAI IATVSVQT+TKL   F FLSIA++ CF  +  A++I    + +S+ILYC GGF   T  F+A AIPY  HF I
Subjt:  RHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPYSLHFQI

Query:  ITFAIYLVFLSIIILL
        I   +Y +F  I ++L
Subjt:  ITFAIYLVFLSIIILL

A0A0A0LQB6 Uncharacterized protein1.4e-1846.43Show/hide
Query:  AARTWITSLIQPEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTET--KLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYC
        A R W +   + E  D+     R  +  A+MVE+W++M++  CV+SAI IATVSVQ ET  +L   F FLSI ++ CF F+  AK+ +   + VS+ILYC
Subjt:  AARTWITSLIQPEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTET--KLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYC

Query:  IGGFWFVTAFFMAIAIPYSLHFQIITFAIYLVFLSIIILL
        +GGF  VTAFF+A AIP++ +FQII F +YL+F  I +L+
Subjt:  IGGFWFVTAFFMAIAIPYSLHFQIITFAIYLVFLSIIILL

A0A0A0LQP5 Uncharacterized protein3.8e-0839.34Show/hide
Query:  AHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPY-SLH
        A R     A+ VE+ ++ ++  CV+SAI I T SVQ +TKL   F  LS+ ++ CF  +V A++IE   + +S+ILYC+G F   T  F+A AI Y   H
Subjt:  AHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPY-SLH

Query:  FQIITFAIYLVFLSIIILLCYF
        F  I   +Y +F  I I+   F
Subjt:  FQIITFAIYLVFLSIIILLCYF

A0A0A0LSX4 Uncharacterized protein1.2e-1248.39Show/hide
Query:  AAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPYSLHF
        AA+MVE+W+ M++ FCV+SAI IATVSV  +T+L   F  LSIA++ CF  +V A++I    + +S+ILYC+GG  + ++ F+A AIPY+  F
Subjt:  AAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIER--QIVSQILYCIGGFWFVTAFFMAIAIPYSLHF

A0A7N2M5A3 Uncharacterized protein5.0e-0840.52Show/hide
Query:  HRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIERQ--IVSQILYCIGGFWFVTAFFMAIAIPYSLHFQ
        HRH     ++   W ++M+ FC+ASAI IA VSVQ   +LS  F  LS+A +  FA    ++ IE +  + +Q+L  +G F+ VTAFF+AIAIP+ L+ +
Subjt:  HRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAKVIERQ--IVSQILYCIGGFWFVTAFFMAIAIPYSLHFQ

Query:  IITFAIYLVFLSIIIL
          T+AIY + +  I +
Subjt:  IITFAIYLVFLSIIIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAAGAGTGGCGCAAATGAGAGTGATGAGAAGAATCACTGGTGACATCAAAAACTTCTTTCTCCAAACCCTCACAGCAGCCAGAACTTGGATCACCAGTTTAAT
CCAACCCGAACCCAGCGACACGGACACCGAAGCTCACCGCCACCCGTCGACGGCGGCGAAAATGGTAGAGAAGTGGGAAAAGATGATGCTAACATTTTGCGTGGCCTCAG
CCATCGCCATAGCCACCGTCTCTGTCCAAACTGAAACCAAACTGTCTCCTATGTTTCCTTTTCTGTCGATTGCTCTAATGGCATGCTTTGCTTTCATAGTCTCAGCTAAA
GTCATTGAGCGCCAAATAGTTTCTCAAATTCTGTACTGCATCGGTGGGTTTTGGTTCGTCACGGCCTTCTTCATGGCCATTGCCATTCCTTATTCCCTTCACTTCCAAAT
TATAACATTTGCCATCTATCTCGTCTTCCTGTCCATTATCATTTTACTTTGTTATTTCTCTTGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAAGAGTGGCGCAAATGAGAGTGATGAGAAGAATCACTGGTGACATCAAAAACTTCTTTCTCCAAACCCTCACAGCAGCCAGAACTTGGATCACCAGTTTAAT
CCAACCCGAACCCAGCGACACGGACACCGAAGCTCACCGCCACCCGTCGACGGCGGCGAAAATGGTAGAGAAGTGGGAAAAGATGATGCTAACATTTTGCGTGGCCTCAG
CCATCGCCATAGCCACCGTCTCTGTCCAAACTGAAACCAAACTGTCTCCTATGTTTCCTTTTCTGTCGATTGCTCTAATGGCATGCTTTGCTTTCATAGTCTCAGCTAAA
GTCATTGAGCGCCAAATAGTTTCTCAAATTCTGTACTGCATCGGTGGGTTTTGGTTCGTCACGGCCTTCTTCATGGCCATTGCCATTCCTTATTCCCTTCACTTCCAAAT
TATAACATTTGCCATCTATCTCGTCTTCCTGTCCATTATCATTTTACTTTGTTATTTCTCTTGGCTTTAG
Protein sequenceShow/hide protein sequence
MGERVAQMRVMRRITGDIKNFFLQTLTAARTWITSLIQPEPSDTDTEAHRHPSTAAKMVEKWEKMMLTFCVASAIAIATVSVQTETKLSPMFPFLSIALMACFAFIVSAK
VIERQIVSQILYCIGGFWFVTAFFMAIAIPYSLHFQIITFAIYLVFLSIIILLCYFSWL