; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036422 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036422
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Genome locationscaffold5:41092647..41094686
RNA-Seq ExpressionSpg036422
SyntenySpg036422
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006936 - ALOG domain
IPR040222 - ALOG family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057039.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa]1.1e-6192.13Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDD--------NQPIKHL
        RKRTQLK NDDD         QPIKHL
Subjt:  RKRTQLKPNDDD--------NQPIKHL

XP_008465553.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo]8.2e-6292.86Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDD-------NQPIKHL
        RKRTQLK NDDD        QPIKHL
Subjt:  RKRTQLKPNDDD-------NQPIKHL

XP_022994266.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima]1.5e-6087.12Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPE+NPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDD------------DNQPIKHLA
        RKR QLK NDD            +NQP+KHLA
Subjt:  RKRTQLKPNDD------------DNQPIKHLA

XP_023000826.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima]1.5e-6095.65Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDDNQP
        RKR+QLK ND+DNQP
Subjt:  RKRTQLKPNDDDNQP

XP_038896042.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida]2.2e-6292.91Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDDN--------QPIKHL
        RKRTQLK NDDDN        QPIKHL
Subjt:  RKRTQLKPNDDDN--------QPIKHL

TrEMBL top hitse value%identityAlignment
A0A0A0M097 ALOG domain-containing protein1.5e-6189.31Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDD------------NQPIKHL
        RKRTQLK NDDD             QPIKHL
Subjt:  RKRTQLKPNDDD------------NQPIKHL

A0A1S4E614 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like4.0e-6292.86Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDD-------NQPIKHL
        RKRTQLK NDDD        QPIKHL
Subjt:  RKRTQLKPNDDD-------NQPIKHL

A0A5A7UU18 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like5.2e-6292.13Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDD--------NQPIKHL
        RKRTQLK NDDD         QPIKHL
Subjt:  RKRTQLKPNDDD--------NQPIKHL

A0A6J1JYM4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like7.5e-6187.12Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPE+NPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDD------------DNQPIKHLA
        RKR QLK NDD            +NQP+KHLA
Subjt:  RKRTQLKPNDD------------DNQPIKHLA

A0A6J1KGX1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like7.5e-6195.65Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        CNCNHV+EF+RYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQLKPNDDDNQP
        RKR+QLK ND+DNQP
Subjt:  RKRTQLKPNDDDNQP

SwissProt top hitse value%identityAlignment
A2XED8 Protein G1-like79.4e-4577.14Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        C+  HV+EFLRYLDQFGKTKVH  GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE GG+PE+NPF   A+R+YLREV++ QAKARGIPY+KKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQ
        RKR+Q
Subjt:  RKRTQ

Q941W1 Protein G1-like79.4e-4577.14Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        C+  HV+EFLRYLDQFGKTKVH  GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE GG+PE+NPF   A+R+YLREV++ QAKARGIPY+KKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKRTQ
        RKR+Q
Subjt:  RKRTQ

Q9LW68 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 41.6e-4480.58Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        C+  HVLEFLRYLDQFGKTKVH H C FFG P+PPAPC CPLRQAWGSLDALIGRLRAA+EE+GGSPETNPFG  A+R+YLREV++ QAKARGI Y+KKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKR
        RKR
Subjt:  RKR

Q9S7R3 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 104.7e-5286.54Show/hide
Query:  HCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKK
        HC+CNHVL+FLRYLDQFGKTKVH+ GC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF +GAIRVYLREV+ECQAKARGIPYKKK
Subjt:  HCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKK

Query:  KRKR
        K+K+
Subjt:  KRKR

Q9SN52 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 96.5e-4683.33Show/hide
Query:  HVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEH-GGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR
        HVL FLRYLDQFGKTKVH   CVFFGQPDPP PCTCPL+QAWGSLDALIGRLRAAYEEH GGSP+TNPF NG+IRV+LREV+E QAKARGIPY+KKKR++
Subjt:  HVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEH-GGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR

Query:  TQ
        T+
Subjt:  TQ

Arabidopsis top hitse value%identityAlignment
AT1G78815.1 Protein of unknown function (DUF640)4.8e-4467.83Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYK--K
        C  NH+L+FL+YLDQFGKTKVH+HGCVFFGQ +P   C CPL+QAWGSLDALIGRLRAA+EE+GG PE NPF  G IRV+LREV++ QAKARG+PYK  K
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYK--K

Query:  KKRKRTQLKPNDDDN
        K++KR  +K +D ++
Subjt:  KKRKRTQLKPNDDDN

AT2G42610.1 Protein of unknown function (DUF640)3.3e-5386.54Show/hide
Query:  HCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKK
        HC+CNHVL+FLRYLDQFGKTKVH+ GC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF +GAIRVYLREV+ECQAKARGIPYKKK
Subjt:  HCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKK

Query:  KRKR
        K+K+
Subjt:  KRKR

AT2G42610.2 Protein of unknown function (DUF640)3.3e-5386.54Show/hide
Query:  HCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKK
        HC+CNHVL+FLRYLDQFGKTKVH+ GC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF +GAIRVYLREV+ECQAKARGIPYKKK
Subjt:  HCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKK

Query:  KRKR
        K+K+
Subjt:  KRKR

AT3G23290.2 Protein of unknown function (DUF640)1.1e-4580.58Show/hide
Query:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK
        C+  HVLEFLRYLDQFGKTKVH H C FFG P+PPAPC CPLRQAWGSLDALIGRLRAA+EE+GGSPETNPFG  A+R+YLREV++ QAKARGI Y+KKK
Subjt:  CNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKK

Query:  RKR
        RKR
Subjt:  RKR

AT4G18610.1 Protein of unknown function (DUF640)4.6e-4783.33Show/hide
Query:  HVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEH-GGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR
        HVL FLRYLDQFGKTKVH   CVFFGQPDPP PCTCPL+QAWGSLDALIGRLRAAYEEH GGSP+TNPF NG+IRV+LREV+E QAKARGIPY+KKKR++
Subjt:  HVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEH-GGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR

Query:  TQ
        T+
Subjt:  TQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTAGTATGGAGCGTCATGTCGCATCAAGAGTGTAATTTCACCCGAGGTTATAGTGCCATGACGCTCCATTGTAACTGCAATCACGTGCTGGAATTCCTGAGGTA
CCTGGACCAGTTCGGAAAAACAAAGGTTCACTTACACGGGTGTGTATTTTTCGGGCAGCCCGACCCACCTGCCCCTTGCACGTGCCCGCTCCGGCAAGCATGGGGCAGCC
TGGACGCCCTGATCGGACGGCTGAGGGCGGCGTACGAGGAGCACGGGGGGTCGCCGGAGACGAACCCTTTTGGAAATGGAGCAATTCGAGTGTATTTACGGGAAGTGAAG
GAGTGTCAAGCCAAAGCTAGAGGGATTCCGTACAAGAAAAAGAAGAGAAAAAGAACTCAATTGAAGCCCAACGATGACGACAACCAACCCATCAAGCATCTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTAGTATGGAGCGTCATGTCGCATCAAGAGTGTAATTTCACCCGAGGTTATAGTGCCATGACGCTCCATTGTAACTGCAATCACGTGCTGGAATTCCTGAGGTA
CCTGGACCAGTTCGGAAAAACAAAGGTTCACTTACACGGGTGTGTATTTTTCGGGCAGCCCGACCCACCTGCCCCTTGCACGTGCCCGCTCCGGCAAGCATGGGGCAGCC
TGGACGCCCTGATCGGACGGCTGAGGGCGGCGTACGAGGAGCACGGGGGGTCGCCGGAGACGAACCCTTTTGGAAATGGAGCAATTCGAGTGTATTTACGGGAAGTGAAG
GAGTGTCAAGCCAAAGCTAGAGGGATTCCGTACAAGAAAAAGAAGAGAAAAAGAACTCAATTGAAGCCCAACGATGACGACAACCAACCCATCAAGCATCTTGCTTGA
Protein sequenceShow/hide protein sequence
MALVWSVMSHQECNFTRGYSAMTLHCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVK
ECQAKARGIPYKKKKRKRTQLKPNDDDNQPIKHLA