; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036483 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036483
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMethylthioribose-1-phosphate isomerase
Genome locationscaffold5:44977927..44978373
RNA-Seq ExpressionSpg036483
SyntenySpg036483
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584197.1 hypothetical protein SDJN03_20129, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5183.21Show/hide
Query:  MKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFRD
        MK KP +ED+D +LEILKAVAQAWQSHTG+SKPA+EFDAHRRNCRANPSRFKLEAIRSR SV   RRWDF QSLWDSYEIV VSKKLE GLVLDGDGFR+
Subjt:  MKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFRD

Query:  DDGGARIQRKRRESCNSLRNLFNRASSRRFN
         DGG R QRK+RESCNSLRNLFNR +SRRFN
Subjt:  DDGGARIQRKRRESCNSLRNLFNRASSRRFN

XP_011651756.1 uncharacterized protein LOC105434938 [Cucumis sativus]1.6e-5283.82Show/hide
Query:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCS-VADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKP    L DDDR+LEILKAVAQAW SHTG+SKPA+EFDAHRRN R  PSRFK+EAIRSR S V+DRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCS-VADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY
        FR+ + GG R QRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY

XP_022923731.1 uncharacterized protein LOC111431350 [Cucurbita moschata]5.4e-5376.19Show/hide
Query:  ALSIPFPTHNSLIEFTMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVS
        +L++  P  +   + TMK KP +ED+D +LEILKAVAQAWQSHTG+SKPA+EFDAHRRNCRANPSRFKLEAIRSR SV   RRWDF QSLWDSYEIV VS
Subjt:  ALSIPFPTHNSLIEFTMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVS

Query:  KKLEAGLVLDGDGFRDDDGGARIQRKRRESCNSLRNLFNRASSRRFN
        KKLE GLVLDGDGFR+ DGG R QRK+RESCNSLRNLFNR +SRRFN
Subjt:  KKLEAGLVLDGDGFRDDDGGARIQRKRRESCNSLRNLFNRASSRRFN

XP_023519325.1 uncharacterized protein LOC111782756 [Cucurbita pepo subsp. pepo]1.0e-5182.58Show/hide
Query:  TMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFR
        TMK KP +ED+D +LEILKAVAQAWQSHTG+SKPA+EFDAHRRNCRANPSRFKLEAIRSR SV   RRWDF QSLWDSYEIV VSKKLE GLVLDGDGFR
Subjt:  TMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFR

Query:  DDDGGARIQRKRRESCNSLRNLFNRASSRRFN
        + +GG R QRK+RESCNSLRNLFNR +SRRFN
Subjt:  DDDGGARIQRKRRESCNSLRNLFNRASSRRFN

XP_038894267.1 uncharacterized protein LOC120082919 [Benincasa hispida]9.3e-5383.58Show/hide
Query:  MKKKPALEDDD--RYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFR
        MKKKP L+DDD  R+LEILKAVAQAW SHTGSSKPA+EFDAHRRN R  PSRFKLEAIR+R SV+DRRWDF QSLWDSYEIVTVSKKLEAGLVLD DGFR
Subjt:  MKKKPALEDDD--RYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFR

Query:  D-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY
        + D GG R QRK+RESCNSLRNLF+RASSRRFNY
Subjt:  D-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY

TrEMBL top hitse value%identityAlignment
A0A0A0LTM3 Uncharacterized protein7.6e-5383.82Show/hide
Query:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCS-VADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKP    L DDDR+LEILKAVAQAW SHTG+SKPA+EFDAHRRN R  PSRFK+EAIRSR S V+DRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCS-VADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY
        FR+ + GG R QRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY

A0A1S3AX17 uncharacterized protein LOC1034838291.4e-5182.35Show/hide
Query:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRC-SVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKP    L D DR+LEILKAVAQAW +HTG+SKPA+EFDAHRRN R  PSRFKLEAIRSR  SV++RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRC-SVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY
        FR+ + GG R QRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY

A0A5A7UNW1 Uncharacterized protein1.4e-5182.35Show/hide
Query:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRC-SVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
        MKKKP    L D DR+LEILKAVAQAW +HTG+SKPA+EFDAHRRN R  PSRFKLEAIRSR  SV++RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG
Subjt:  MKKKP---ALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRC-SVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDG

Query:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY
        FR+ + GG R QRKRRESCNSLRNLFNRASSRRFNY
Subjt:  FRD-DDGGARIQRKRRESCNSLRNLFNRASSRRFNY

A0A6J1E7J5 uncharacterized protein LOC1114313502.6e-5376.19Show/hide
Query:  ALSIPFPTHNSLIEFTMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVS
        +L++  P  +   + TMK KP +ED+D +LEILKAVAQAWQSHTG+SKPA+EFDAHRRNCRANPSRFKLEAIRSR SV   RRWDF QSLWDSYEIV VS
Subjt:  ALSIPFPTHNSLIEFTMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVS

Query:  KKLEAGLVLDGDGFRDDDGGARIQRKRRESCNSLRNLFNRASSRRFN
        KKLE GLVLDGDGFR+ DGG R QRK+RESCNSLRNLFNR +SRRFN
Subjt:  KKLEAGLVLDGDGFRDDDGGARIQRKRRESCNSLRNLFNRASSRRFN

A0A6J1KNC1 uncharacterized protein LOC1114957275.0e-5283.97Show/hide
Query:  MKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFRD
        MK K  +ED+D +LEILKAVAQAWQSHTG+SKPA+EFDAHRRNCRANPSRFKLEAIRSR SVA  RRWDF QSLWDSYEIV VSKKLEAGLVLDGDGFR+
Subjt:  MKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVAD-RRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGFRD

Query:  DDGGARIQRKRRESCNSLRNLFNRASSRRFN
         DGG R QRK+RESCNSLRNLFNR +SRRFN
Subjt:  DDGGARIQRKRRESCNSLRNLFNRASSRRFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24700.1 unknown protein6.9e-2246.88Show/hide
Query:  EDDDRYLEILKAVAQAWQSHTGSSK-PATEFDAHRRNC--RANPSRFKLEAIRSRCSVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGF--RDDDG
        E+  + LE++KA AQAW SH+ +SK    EFDA R++   +   SRFK EA+ ++   +   W+F QSLWD YEI++VSKKLE  L L+   F   D+DG
Subjt:  EDDDRYLEILKAVAQAWQSHTGSSK-PATEFDAHRRNC--RANPSRFKLEAIRSRCSVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLDGDGF--RDDDG

Query:  GARIQRKR-RESCNSLRNLFNRASSRRF
          ++++K+ R+S NSLR+LF R+SS+RF
Subjt:  GARIQRKR-RESCNSLRNLFNRASSRRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTTTCCATTCCATTTCCCACTCACAATTCACTGATTGAATTCACTATGAAGAAGAAACCAGCCCTTGAAGACGACGATCGTTACCTCGAGATCCTCAAGGCCGT
CGCCCAGGCCTGGCAGAGCCACACCGGCAGTTCCAAGCCCGCTACTGAATTCGACGCCCATCGCCGGAATTGCAGGGCCAATCCATCCAGGTTCAAGCTTGAGGCCATTC
GGAGCAGGTGTTCCGTCGCCGACCGGCGATGGGACTTCGCCCAGTCGCTGTGGGACTCGTATGAGATCGTGACGGTGTCGAAGAAGCTGGAGGCCGGGCTGGTGCTCGAC
GGCGACGGGTTTCGAGATGACGACGGCGGTGCGCGGATTCAGCGGAAACGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTCAATAGGGCTTCTTCCAGGAGATTCAA
TTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTTTCCATTCCATTTCCCACTCACAATTCACTGATTGAATTCACTATGAAGAAGAAACCAGCCCTTGAAGACGACGATCGTTACCTCGAGATCCTCAAGGCCGT
CGCCCAGGCCTGGCAGAGCCACACCGGCAGTTCCAAGCCCGCTACTGAATTCGACGCCCATCGCCGGAATTGCAGGGCCAATCCATCCAGGTTCAAGCTTGAGGCCATTC
GGAGCAGGTGTTCCGTCGCCGACCGGCGATGGGACTTCGCCCAGTCGCTGTGGGACTCGTATGAGATCGTGACGGTGTCGAAGAAGCTGGAGGCCGGGCTGGTGCTCGAC
GGCGACGGGTTTCGAGATGACGACGGCGGTGCGCGGATTCAGCGGAAACGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTCAATAGGGCTTCTTCCAGGAGATTCAA
TTATTAG
Protein sequenceShow/hide protein sequence
MALSIPFPTHNSLIEFTMKKKPALEDDDRYLEILKAVAQAWQSHTGSSKPATEFDAHRRNCRANPSRFKLEAIRSRCSVADRRWDFAQSLWDSYEIVTVSKKLEAGLVLD
GDGFRDDDGGARIQRKRRESCNSLRNLFNRASSRRFNY