; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036578 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036578
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsnakin-2-like
Genome locationscaffold5:45412883..45414287
RNA-Seq ExpressionSpg036578
SyntenySpg036578
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]1.5e-4276.92Show/hide
Query:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMC
        MAVR    LLLLGV VFLCLSQVSS+G+  EEEGM  M+   +++RG  RRLMQ IDCG +C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMC
Subjt:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMC

Query:  GTCYTTMTTHGNRTKCP
        GTCYT+MTTHGNRTKCP
Subjt:  GTCYTTMTTHGNRTKCP

XP_007155392.1 hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris]3.2e-3766.67Show/hide
Query:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC
        MA+R LLL+G+ + +CL++VSSD + E+EE  +   D+  +VR   RRLMQ+IDCG  CK RCG HSRPN C RACGTCC RCKCVPPGTSGNRE+CGTC
Subjt:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHGNRTKCP
        YT MTTHGN+TKCP
Subjt:  YTTMTTHGNRTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]3.3e-4272.22Show/hide
Query:  MAVR---FLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPP
        MAVR    LLLLGV VFLCLS        Q+SSDG+ ++E GM  M+ D  +V+RG  RRLMQ IDCG ECKRRCGAHSRPNRCIRACGTCC RC+CVPP
Subjt:  MAVR---FLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPP

Query:  GTSGNREMCGTCYTTMTTHGNRTKCP
        GTSGNREMCGTCYT+MTTHGN+TKCP
Subjt:  GTSGNREMCGTCYTTMTTHGNRTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]2.1e-4477.12Show/hide
Query:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREM
        MAVR    LLLLGV VFLCLSQ+SSDG+ ++E GM  M+ D  +V+RG  RRLMQ IDCG ECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREM
Subjt:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREM

Query:  CGTCYTTMTTHGNRTKCP
        CGTCYT+MTTHGN+TKCP
Subjt:  CGTCYTTMTTHGNRTKCP

XP_038895055.1 snakin-2-like [Benincasa hispida]8.7e-4377.78Show/hide
Query:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMC
        MAVR    LLLLG+ V L LSQVSSDG+   EEGMM M+   +V+RG  RRLMQNI+CGWECKRRCGAHSRPNRCIRACGTCC RCKCVP GTSGNREMC
Subjt:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMC

Query:  GTCYTTMTTHGNRTKCP
        GTCYT MTTHGN+TKCP
Subjt:  GTCYTTMTTHGNRTKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LW79 Uncharacterized protein7.2e-4376.92Show/hide
Query:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMC
        MAVR    LLLLGV VFLCLSQVSS+G+  EEEGM  M+   +++RG  RRLMQ IDCG +C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMC
Subjt:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMC

Query:  GTCYTTMTTHGNRTKCP
        GTCYT+MTTHGNRTKCP
Subjt:  GTCYTTMTTHGNRTKCP

A0A1S3AVJ9 snakin-2-like isoform X21.0e-4477.12Show/hide
Query:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREM
        MAVR    LLLLGV VFLCLSQ+SSDG+ ++E GM  M+ D  +V+RG  RRLMQ IDCG ECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREM
Subjt:  MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREM

Query:  CGTCYTTMTTHGNRTKCP
        CGTCYT+MTTHGN+TKCP
Subjt:  CGTCYTTMTTHGNRTKCP

A0A1S3AW57 snakin-2-like isoform X11.6e-4272.22Show/hide
Query:  MAVR---FLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPP
        MAVR    LLLLGV VFLCLS        Q+SSDG+ ++E GM  M+ D  +V+RG  RRLMQ IDCG ECKRRCGAHSRPNRCIRACGTCC RC+CVPP
Subjt:  MAVR---FLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPP

Query:  GTSGNREMCGTCYTTMTTHGNRTKCP
        GTSGNREMCGTCYT+MTTHGN+TKCP
Subjt:  GTSGNREMCGTCYTTMTTHGNRTKCP

A0A6J1JZU9 snakin-2-like2.0e-3767.21Show/hide
Query:  MAVRFLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSG
        MA RFLLLLGVL FLCLS         V  DG+     G       G  VR P  R+M  IDCGWECKRRCGAHSRPNRC+R CGTCC RC CVPPGTSG
Subjt:  MAVRFLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSG

Query:  NREMCGTCYTTMTTHGNRTKCP
        NREMCGTCYT MTTHGN+TKCP
Subjt:  NREMCGTCYTTMTTHGNRTKCP

V7CEP9 Uncharacterized protein1.6e-3766.67Show/hide
Query:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC
        MA+R LLL+G+ + +CL++VSSD + E+EE  +   D+  +VR   RRLMQ+IDCG  CK RCG HSRPN C RACGTCC RCKCVPPGTSGNRE+CGTC
Subjt:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHGNRTKCP
        YT MTTHGN+TKCP
Subjt:  YTTMTTHGNRTKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 118.6e-1762.9Show/hide
Query:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP
        IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY ++TTHG R KCP
Subjt:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP

P46687 Gibberellin-regulated protein 34.5e-1842.98Show/hide
Query:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC
        MA+    L+ +L+  CL+      H+ E+  +      GE V          IDCG  CK RC   SRPN C+RAC +CC+RC CVPPGT+GN  +C  C
Subjt:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHGNRTKCP
        Y ++TT G R KCP
Subjt:  YTTMTTHGNRTKCP

P46688 Gibberellin-regulated protein 21.5e-1642.98Show/hide
Query:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC
        MAV    L+ +L+ +CL+      H+          D  +V  G     +  IDCG  CK RC   SR   C+RAC +CC RC CVPPGTSGN  +C  C
Subjt:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHGNRTKCP
        Y ++TTHG R KCP
Subjt:  YTTMTTHGNRTKCP

Q93X17 Snakin-22.7e-1864.06Show/hide
Query:  QNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP
        + IDCG  C  RC   SRP  C RACGTCC RC CVPPGTSGN E C  CY ++TTHGN+ KCP
Subjt:  QNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP

Q9LFR3 Gibberellin-regulated protein 147.0e-1964.52Show/hide
Query:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP
        IDC   C  RCG HSR N C+RAC TCC+RCKCVPPGT GN+E CG+CY  M T G ++KCP
Subjt:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.2 GAST1 protein homolog 16.1e-1841.74Show/hide
Query:  MAVRFLLLLGVLV-FLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGT
        MA+   L+  +L+  L L  V +D +S+++ G                   + IDCG  C  RC    RP  C RACGTCC+RC CVPPGT GN + C  
Subjt:  MAVRFLLLLGVLV-FLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGT

Query:  CYTTMTTHGNRTKCP
        CY ++TTHG R KCP
Subjt:  CYTTMTTHGNRTKCP

AT2G18420.1 Gibberellin-regulated family protein6.1e-1862.9Show/hide
Query:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP
        IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY ++TTHG R KCP
Subjt:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP

AT4G09600.1 GAST1 protein homolog 33.2e-1942.98Show/hide
Query:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC
        MA+    L+ +L+  CL+      H+ E+  +      GE V          IDCG  CK RC   SRPN C+RAC +CC+RC CVPPGT+GN  +C  C
Subjt:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHGNRTKCP
        Y ++TT G R KCP
Subjt:  YTTMTTHGNRTKCP

AT4G09610.1 GAST1 protein homolog 21.0e-1742.98Show/hide
Query:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC
        MAV    L+ +L+ +CL+      H+          D  +V  G     +  IDCG  CK RC   SR   C+RAC +CC RC CVPPGTSGN  +C  C
Subjt:  MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHGNRTKCP
        Y ++TTHG R KCP
Subjt:  YTTMTTHGNRTKCP

AT5G14920.1 Gibberellin-regulated family protein5.0e-2064.52Show/hide
Query:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP
        IDC   C  RCG HSR N C+RAC TCC+RCKCVPPGT GN+E CG+CY  M T G ++KCP
Subjt:  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGA
TCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAA
GGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGG
ACCAAGTGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGA
TCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAA
GGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGG
ACCAAGTGCCCTTGA
Protein sequenceShow/hide protein sequence
MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNR
TKCP