; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036592 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036592
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationscaffold5:47326671..47335212
RNA-Seq ExpressionSpg036592
SyntenySpg036592
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY22193.1 GTPase IMAP family member 1, putative [Theobroma cacao]8.8e-0941.59Show/hide
Query:  KPAAVTAAETVE--EWKEMIVAFCLSSAMAIATVSVQI-EKKLPNLFEFLSVGLLLCFGCVAFGK-MTKSIFKRVSQILYCVGGFLAVTALFIATAIPYA
        +PAA+T  ++     W+++IVAFCL S++ IAT+  QI   +LP  F FLS+ +LL F C+  GK  + S F  ++++L  +GGF  VTA FIA AIP+ 
Subjt:  KPAAVTAAETVE--EWKEMIVAFCLSSAMAIATVSVQI-EKKLPNLFEFLSVGLLLCFGCVAFGK-MTKSIFKRVSQILYCVGGFLAVTALFIATAIPYA

Query:  PYFQMIIFLIYLI
         + Q     +Y I
Subjt:  PYFQMIIFLIYLI

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]2.7e-2158.16Show/hide
Query:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPY
        GG + +   AAE VEEWK+MI+ FC+SSA+ IATVSV I+ +LPN F+ LS+ +LLCF  V F +M  SIF+ +S+ILYCVGG L  ++ FIATAIPY
Subjt:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5073.72Show/hide
Query:  MRWVGNCIRKATACWLWELEDEPDGGGGG---KPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIF
        MRW  NCI+   A  LWELED  +GGGGG     AAV AAE VEEWK+MIVAFC+SSA+AIATVSVQIEKKLP +F FLS+ LLLCFG VAFGKMTKSI 
Subjt:  MRWVGNCIRKATACWLWELEDEPDGGGGG---KPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIF

Query:  KRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIFLIYLIFWFIFMFIIHKAPSS
        KRVS+ILYCVGG L VTALFIA+AIPYA YFQ+IIFLIYLIFW +FM + HK+ SS
Subjt:  KRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIFLIYLIFWFIFMFIIHKAPSS

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1650.89Show/hide
Query:  VTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIF
        V+A E + +W+ M+V FC+ +A+AIATVSVQI+ KL  +F+FLS  L+ CF      K+ K   +RVS ILY +GGF  VTA FIA AIPYA +FQ++  
Subjt:  VTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIF

Query:  LIYLIFWFIFMF
         +YL+F FI  F
Subjt:  LIYLIFWFIFMF

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]2.7e-1357.69Show/hide
Query:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQIL
        GG + +    AE VEE KEMI+ FCLSSA+ IATVSVQ + KLPN F+FLS+ +L+CF  V F +M  SIFK +S+IL
Subjt:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein2.3e-2653.08Show/hide
Query:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAP
        GG + +    AE VEE KEMI+ FCLSSA+ IATVSVQ + KLPN F+FLS+ +L+CF  V F +M  SIFK +S+ILYC GGFL  T  FIATAIPY  
Subjt:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAP

Query:  YFQMIIFLIYLIFWFIFMFIIHKAPSSNNP
        +F +I+ ++Y IF  IF+ +I    + ++P
Subjt:  YFQMIIFLIYLIFWFIFMFIIHKAPSSNNP

A0A0A0LQB6 Uncharacterized protein8.5e-4265.62Show/hide
Query:  WVGNCIRKATACWLWEL----EDEPDGGGGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIE--KKLPNLFEFLSVGLLLCFGCVAFGKMTKSI
        WVG+CIRK  AC LWE     E+  D GG G       AE VEEWKEMIVA C+SSA+ IATVSVQIE  K+LP  F+FLS+ +LLCFG V F KMTK I
Subjt:  WVGNCIRKATACWLWEL----EDEPDGGGGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIE--KKLPNLFEFLSVGLLLCFGCVAFGKMTKSI

Query:  FKRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIFLIYLIFWFIFMFI--IH-KAPSS
        FK VS+ILYCVGGFL VTA FIATAIP+APYFQ+IIF++YL+F FIFM I  IH + PSS
Subjt:  FKRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIFLIYLIFWFIFMFI--IH-KAPSS

A0A0A0LQP5 Uncharacterized protein4.1e-2048.12Show/hide
Query:  GGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPY-AP
        G + +    AETVEE KE I+  C+SSA+ I T SVQI+ KLPN F+ LS+ +LLCF  V F +M +S+F+ +S+ILYCVG F+  T  FIATAI Y   
Subjt:  GGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPY-AP

Query:  YFQMIIFLIYLIF------WFIFMFIIHKAPSS
        +F  I+ ++Y IF      + IF+ I H  PSS
Subjt:  YFQMIIFLIYLIF------WFIFMFIIHKAPSS

A0A0A0LSX4 Uncharacterized protein3.4e-2257.84Show/hide
Query:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAP
        GG + +   AAE VEEWK+MI+ FC+SSA+ IATVSV I+ +LPN F+ LS+ +LLCF  V F +M  SIF+ +S+ILYCVGG L  ++ FIATAIPYA 
Subjt:  GGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAP

Query:  YF
         F
Subjt:  YF

A0A7N2R866 Uncharacterized protein1.7e-1038.21Show/hide
Query:  ELEDEPDGGGGGKPAAVTAAETVE--EWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTA
        E   +  G G  K A       V   EW E+++AFCL+SA+ IA +SVQ+  +LP LF   S+ +LL F  V   K     F R +Q+L   G F  VTA
Subjt:  ELEDEPDGGGGGKPAAVTAAETVE--EWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTA

Query:  LFIATAIPYAPYFQMIIFLIYLI
         FIA  IP+  Y +   +++Y I
Subjt:  LFIATAIPYAPYFQMIIFLIYLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGACTTCCCCGGTTCTACAATCTGCTCGGGCATTAAAAGATTCAATGGCATCTGGCCTGTGAAGATGCTAGAGATGAGAGCAATTTTAGAAGGGTTGCGTAGCTT
ACCAACTATCCGGGCTTCTCTCCCTCACCTGGATATTCCGCCAGTGGTTGTTATCTCTGATTCCATCGGCAATTTTGGACCACCCGGCGCACAAGGAGCTGACGAAGACA
ACCGGGCAGAAATAGGGCTGAGAGATGGACCCCAGAGGCAAAACCGGCAAACGAGACCGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCTGCTCTGCCTCGG
CCATGGGCCGAGGCCGAGTCCCACCGACTCCGCTCGGTCCCTGCAGCCTTCAGCCGCCCCGGTTTCGCCTGGTTCGTCCTGAAACGCCTCCGAATTCCTAAAAACCCTAG
GAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCAGTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCAC
GTGAAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACAAGGACGTCCGGGCAAAGATAGGGCTAGGAGACCGACCCAGAGGAAGAACCGGCCAAAGGGCCGGGCCA
ACTTGGCCCGACCCATATGGTCACCTCCTCTCGGTCCCCAATGCCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAG
CACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCTCCCTCATCTATAAATTTACCGTTGGTGGCACGTG
AAGTTCTAAAAGAAGAAATTAAACTTAAACTAGCTAGCATGCGTTGGGTTGGAAATTGCATTAGAAAGGCAACTGCATGTTGGTTGTGGGAATTAGAGGACGAACCAGAC
GGCGGCGGAGGCGGGAAGCCGGCGGCTGTGACAGCGGCGGAGACGGTGGAGGAATGGAAGGAGATGATAGTAGCATTCTGCCTGTCGTCGGCCATGGCCATAGCAACAGT
GTCGGTTCAGATAGAAAAGAAACTGCCAAATTTGTTTGAGTTTCTTTCGGTTGGTCTGTTGCTGTGTTTTGGGTGCGTGGCTTTTGGGAAAATGACCAAATCCATTTTCA
AGAGAGTTTCGCAGATTCTGTACTGTGTGGGCGGGTTTCTGGCAGTGACGGCTCTGTTCATAGCCACTGCAATTCCATATGCACCATATTTTCAGATGATCATCTTTCTC
ATTTACTTGATCTTCTGGTTCATCTTCATGTTCATCATTCACAAGGCTCCTTCTTCCAATAATCCTGATCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGACTTCCCCGGTTCTACAATCTGCTCGGGCATTAAAAGATTCAATGGCATCTGGCCTGTGAAGATGCTAGAGATGAGAGCAATTTTAGAAGGGTTGCGTAGCTT
ACCAACTATCCGGGCTTCTCTCCCTCACCTGGATATTCCGCCAGTGGTTGTTATCTCTGATTCCATCGGCAATTTTGGACCACCCGGCGCACAAGGAGCTGACGAAGACA
ACCGGGCAGAAATAGGGCTGAGAGATGGACCCCAGAGGCAAAACCGGCAAACGAGACCGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCTGCTCTGCCTCGG
CCATGGGCCGAGGCCGAGTCCCACCGACTCCGCTCGGTCCCTGCAGCCTTCAGCCGCCCCGGTTTCGCCTGGTTCGTCCTGAAACGCCTCCGAATTCCTAAAAACCCTAG
GAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCAGTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCAC
GTGAAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACAAGGACGTCCGGGCAAAGATAGGGCTAGGAGACCGACCCAGAGGAAGAACCGGCCAAAGGGCCGGGCCA
ACTTGGCCCGACCCATATGGTCACCTCCTCTCGGTCCCCAATGCCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAG
CACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCTCCCTCATCTATAAATTTACCGTTGGTGGCACGTG
AAGTTCTAAAAGAAGAAATTAAACTTAAACTAGCTAGCATGCGTTGGGTTGGAAATTGCATTAGAAAGGCAACTGCATGTTGGTTGTGGGAATTAGAGGACGAACCAGAC
GGCGGCGGAGGCGGGAAGCCGGCGGCTGTGACAGCGGCGGAGACGGTGGAGGAATGGAAGGAGATGATAGTAGCATTCTGCCTGTCGTCGGCCATGGCCATAGCAACAGT
GTCGGTTCAGATAGAAAAGAAACTGCCAAATTTGTTTGAGTTTCTTTCGGTTGGTCTGTTGCTGTGTTTTGGGTGCGTGGCTTTTGGGAAAATGACCAAATCCATTTTCA
AGAGAGTTTCGCAGATTCTGTACTGTGTGGGCGGGTTTCTGGCAGTGACGGCTCTGTTCATAGCCACTGCAATTCCATATGCACCATATTTTCAGATGATCATCTTTCTC
ATTTACTTGATCTTCTGGTTCATCTTCATGTTCATCATTCACAAGGCTCCTTCTTCCAATAATCCTGATCTCTGA
Protein sequenceShow/hide protein sequence
MRDFPGSTICSGIKRFNGIWPVKMLEMRAILEGLRSLPTIRASLPHLDIPPVVVISDSIGNFGPPGAQGADEDNRAEIGLRDGPQRQNRQTRPVKTEGVGRLARPPALPR
PWAEAESHRLRSVPAAFSRPGFAWFVLKRLRIPKNPRSTSSIGGGVASTTPVCRFSVLQATSSPSSTNLPLVAREGNFGPPDAQGADKDVRAKIGLGDRPRGRTGQRAGP
TWPDPYGHLLSVPNAASRLGFAWFVPKRLRIPKNPRSTSSIGGGVASTTPVCRFTLLQATSSPSSINLPLVAREVLKEEIKLKLASMRWVGNCIRKATACWLWELEDEPD
GGGGGKPAAVTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLFEFLSVGLLLCFGCVAFGKMTKSIFKRVSQILYCVGGFLAVTALFIATAIPYAPYFQMIIFL
IYLIFWFIFMFIIHKAPSSNNPDL