; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036639 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036639
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:48753329..48756155
RNA-Seq ExpressionSpg036639
SyntenySpg036639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4279811.1 unnamed protein product [Prunus armeniaca]2.4e-0433.73Show/hide
Query:  PQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISES-LKYLPNVSPRVRVESDASQVVRLL
        P G+ K+NCDA+W  +  +GG+ W++R  +   + AG K   R      +EA  I E+ L  + +   ++ VESD+ Q++R+L
Subjt:  PQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISES-LKYLPNVSPRVRVESDASQVVRLL

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]6.8e-0738.37Show/hide
Query:  SPPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR--VRVESDASQVVRLL
        +PP   WK+N DASWS+ER +GGI WIL       ++AG   ++ + ++  LE +TI   L+++ N+  R  + +ESD+ +V+RL+
Subjt:  SPPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR--VRVESDASQVVRLL

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]8.3e-0529.7Show/hide
Query:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL
        F+P   +    +A   PP    WK+N DA+W  + N  GI WILR      +  G ++++ +  + +LE + I E L+ +     R + +ESD+ + + L
Subjt:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL

Query:  L
        L
Subjt:  L

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]8.3e-0529.7Show/hide
Query:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL
        F+P   +    +A   PP    WK+N DA+W  + N  GI WILR      +  G ++++ +  + +LE + I E L+ +     R + +ESD+ + + L
Subjt:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL

Query:  L
        L
Subjt:  L

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]4.2e-0935.71Show/hide
Query:  ATVIHEATHTTVTDEAFNPNAAVSIPRKALIS------PPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKY
        +T+I + T   VT+ ++    ++S+  K L +      PP  IW +N DASWSD  + GGI WI+R W    ++AG + V+    V  LEA  I E L+ 
Subjt:  ATVIHEATHTTVTDEAFNPNAAVSIPRKALIS------PPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKY

Query:  LPN--VSPRVRVESDASQVVRLLSHK
        L N  V   + +E+D+++V  LL+ K
Subjt:  LPN--VSPRVRVESDASQVVRLLSHK

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132163.3e-0738.37Show/hide
Query:  SPPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR--VRVESDASQVVRLL
        +PP   WK+N DASWS+ER +GGI WIL       ++AG   ++ + ++  LE +TI   L+++ N+  R  + +ESD+ +V+RL+
Subjt:  SPPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR--VRVESDASQVVRLL

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X14.0e-0529.7Show/hide
Query:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL
        F+P   +    +A   PP    WK+N DA+W  + N  GI WILR      +  G ++++ +  + +LE + I E L+ +     R + +ESD+ + + L
Subjt:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL

Query:  L
        L
Subjt:  L

A0A6J1DNV9 uncharacterized protein LOC1110224032.0e-0935.71Show/hide
Query:  ATVIHEATHTTVTDEAFNPNAAVSIPRKALIS------PPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKY
        +T+I + T   VT+ ++    ++S+  K L +      PP  IW +N DASWSD  + GGI WI+R W    ++AG + V+    V  LEA  I E L+ 
Subjt:  ATVIHEATHTTVTDEAFNPNAAVSIPRKALIS------PPQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKY

Query:  LPN--VSPRVRVESDASQVVRLLSHK
        L N  V   + +E+D+++V  LL+ K
Subjt:  LPN--VSPRVRVESDASQVVRLLSHK

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X24.0e-0529.7Show/hide
Query:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL
        F+P   +    +A   PP    WK+N DA+W  + N  GI WILR      +  G ++++ +  + +LE + I E L+ +     R + +ESD+ + + L
Subjt:  FNPNAAVSIPRKALISPP-QGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPR-VRVESDASQVVRL

Query:  L
        L
Subjt:  L

A0A6J5UV01 Reverse transcriptase domain-containing protein1.2e-0433.73Show/hide
Query:  PQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISES-LKYLPNVSPRVRVESDASQVVRLL
        P G+ K+NCDA+W  +  +GG+ W++R  +   + AG K   R      +EA  I E+ L  + +   ++ VESD+ Q++R+L
Subjt:  PQGIWKMNCDASWSDERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISES-LKYLPNVSPRVRVESDASQVVRLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCTCTGTTGTCTTCGCACGAGAACGTCGTCGCCGTCGAGCTGGAACCGCGTGTTCGTGAGTTTAGATCCAAGTCCAGATTCGCGCTGCTCGCCGCTGAGTTTGT
GAGTTCAGATCCGCGCGCGTTCGCAGTCGAGTTCGTGAGTTCAGATTCGTACCTTGCCGCCGAGTTCCTGAGTTCAGATCCGAACCGTTCGCGCGTCGAGTTCGTGAGTT
CTTATTCGCATGTCAGATCTGAGTTCATGAGTTTATATCCGCTCGTCTTCGCAGAAGCTTGTGAGTTCGTGAGTTGTAGCCTTCGCACGAGAACGCCGACAAACGAAAGG
AAAGGGAACGCCGTCTTCGCTCAATTAAATGGTTATAAGACAACGAAGGCATCCAGTTCGCGGTCCAATCGCGCGCTAAGGGAAGTAGGGGTGGCGAGCTCTTCGACGCA
AATTGTTCACGCAACAGCTCCGATTGCAGCGATCAATATGACAGCAGCGGATGAAGAGTCAGACACATACATGGCAGCGACAGTTATTCATGAAGCGACCCATACGACAG
TAACAGACGAAGCCTTCAACCCAAATGCAGCAGTCTCGATCCCAAGGAAGGCTTTGATCTCACCGCCTCAAGGGATTTGGAAGATGAACTGTGACGCTTCGTGGTCAGAT
GAGCGAAATCTGGGAGGAATCGACTGGATTTTACGCCACTGGTTTGAAACTCCTCTGATGGCAGGATACAAAGTTGTGAAACGTCAGTGGAAAGTGGCTTGGTTGGAAGC
CCTGACAATTAGCGAGAGTTTGAAATACCTTCCGAATGTATCTCCTAGAGTGAGGGTGGAATCAGATGCAAGCCAGGTTGTTAGATTGCTCTCCCATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCTCTGTTGTCTTCGCACGAGAACGTCGTCGCCGTCGAGCTGGAACCGCGTGTTCGTGAGTTTAGATCCAAGTCCAGATTCGCGCTGCTCGCCGCTGAGTTTGT
GAGTTCAGATCCGCGCGCGTTCGCAGTCGAGTTCGTGAGTTCAGATTCGTACCTTGCCGCCGAGTTCCTGAGTTCAGATCCGAACCGTTCGCGCGTCGAGTTCGTGAGTT
CTTATTCGCATGTCAGATCTGAGTTCATGAGTTTATATCCGCTCGTCTTCGCAGAAGCTTGTGAGTTCGTGAGTTGTAGCCTTCGCACGAGAACGCCGACAAACGAAAGG
AAAGGGAACGCCGTCTTCGCTCAATTAAATGGTTATAAGACAACGAAGGCATCCAGTTCGCGGTCCAATCGCGCGCTAAGGGAAGTAGGGGTGGCGAGCTCTTCGACGCA
AATTGTTCACGCAACAGCTCCGATTGCAGCGATCAATATGACAGCAGCGGATGAAGAGTCAGACACATACATGGCAGCGACAGTTATTCATGAAGCGACCCATACGACAG
TAACAGACGAAGCCTTCAACCCAAATGCAGCAGTCTCGATCCCAAGGAAGGCTTTGATCTCACCGCCTCAAGGGATTTGGAAGATGAACTGTGACGCTTCGTGGTCAGAT
GAGCGAAATCTGGGAGGAATCGACTGGATTTTACGCCACTGGTTTGAAACTCCTCTGATGGCAGGATACAAAGTTGTGAAACGTCAGTGGAAAGTGGCTTGGTTGGAAGC
CCTGACAATTAGCGAGAGTTTGAAATACCTTCCGAATGTATCTCCTAGAGTGAGGGTGGAATCAGATGCAAGCCAGGTTGTTAGATTGCTCTCCCATAAATAG
Protein sequenceShow/hide protein sequence
MFALLSSHENVVAVELEPRVREFRSKSRFALLAAEFVSSDPRAFAVEFVSSDSYLAAEFLSSDPNRSRVEFVSSYSHVRSEFMSLYPLVFAEACEFVSCSLRTRTPTNER
KGNAVFAQLNGYKTTKASSSRSNRALREVGVASSSTQIVHATAPIAAINMTAADEESDTYMAATVIHEATHTTVTDEAFNPNAAVSIPRKALISPPQGIWKMNCDASWSD
ERNLGGIDWILRHWFETPLMAGYKVVKRQWKVAWLEALTISESLKYLPNVSPRVRVESDASQVVRLLSHK