; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036694 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036694
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold5:41304419..41305523
RNA-Seq ExpressionSpg036694
SyntenySpg036694
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]4.2e-5049.49Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  +D  LV+CL+ LV+ G WR DNGTF+PG+  Q+ K+MKE++L  NI V+PN++S  ++ K+QY  IAEMMGP CSGF WN+ERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +   WV+    A+ L N+PFP+F +L +VFG+D A GG+ +TP+E+  +     + E+DM +  +DF +PNP  L+P SGE+  +TPT+ A  AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

KAA0036924.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-4643.75Show/hide
Query:  METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNI
        +ETT+ WS WRDNLA  M+ +W     ++  +  AP     +HVWT E++  LV+CL+ LV +GGW+ DNGTFRPG+  Q+ +MM E+L GC +  +  I
Subjt:  METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNI

Query:  DSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLEN-DM
        D R +  KR + AIAEM GPACSGFGWN+E KCI AEK++F+ WV     AKGL N+PFP+++EL  VF +D A G  A T  ++    EP    +  DM
Subjt:  DSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLEN-DM

Query:  NVEYDDFYVPNPPVLD---PTSGEENCTTPTARAGAAGAG
            +DF    PPV       S ++ C +  +RA     G
Subjt:  NVEYDDFYVPNPPVLD---PTSGEENCTTPTARAGAAGAG

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-4748.48Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  KD  LV+CL+ LV+ GGWR +N TF+P +  Q+ K+MKE++   NI V+ N++SR +  K+QY AIA+MMGPACS FGWNEERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +F+ WV+    A+GL N+PF +F +L +VFG+D A GGR +  +E+A +     + E+DM++  +DF +PNP  L+P SGE+  +T  +    AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]4.2e-5049.49Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  +D  LV+CL+ LV+ G WR DNGTF+PG+  Q+ K+MKE++L  NI V+PN++S  ++ K+QY  IAEMMGP CSGF WN+ERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +   WV+    A+ L N+PFP+F +L +VFG+D A GG+ +TP+E+  +     + E+DM +  +DF +PNP  L+P SGE+  +TPT+ A  AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]3.3e-4748.48Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  KD  LV+CL+ LV+ GGWR +N TF+P +  Q+ K+MKE++   NI V+ N++SR +  K+QY AIA+MMGPACS FGWNEERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +F+ WV+    A+GL N+PF +F +L +VFG+D A GGR +  +E+A +     + E+DM++  +DF +PNP  L+P SGE+  +T  +    AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

TrEMBL top hitse value%identityAlignment
A0A1S3C252 uncharacterized protein At2g29880-like1.6e-4748.48Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  KD  LV+CL+ LV+ GGWR +N TF+P +  Q+ K+MKE++   NI V+ N++SR +  K+QY AIA+MMGPACS FGWNEERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +F+ WV+    A+GL N+PF +F +L +VFG+D A GGR +  +E+A +     + E+DM++  +DF +PNP  L+P SGE+  +T  +    AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein2.0e-5049.49Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  +D  LV+CL+ LV+ G WR DNGTF+PG+  Q+ K+MKE++L  NI V+PN++S  ++ K+QY  IAEMMGP CSGF WN+ERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +   WV+    A+ L N+PFP+F +L +VFG+D A GG+ +TP+E+  +     + E+DM +  +DF +PNP  L+P SGE+  +TPT+ A  AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

A0A5A7T091 Retrotransposon protein1.4e-4643.75Show/hide
Query:  METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNI
        +ETT+ WS WRDNLA  M+ +W     ++  +  AP     +HVWT E++  LV+CL+ LV +GGW+ DNGTFRPG+  Q+ +MM E+L GC +  +  I
Subjt:  METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNI

Query:  DSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLEN-DM
        D R +  KR + AIAEM GPACSGFGWN+E KCI AEK++F+ WV     AKGL N+PFP+++EL  VF +D A G  A T  ++    EP    +  DM
Subjt:  DSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLEN-DM

Query:  NVEYDDFYVPNPPVLD---PTSGEENCTTPTARAGAAGAG
            +DF    PPV       S ++ C +  +RA     G
Subjt:  NVEYDDFYVPNPPVLD---PTSGEENCTTPTARAGAAGAG

A0A5D3BC95 Retrotransposon protein1.6e-4748.48Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  KD  LV+CL+ LV+ GGWR +N TF+P +  Q+ K+MKE++   NI V+ N++SR +  K+QY AIA+MMGPACS FGWNEERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +F+ WV+    A+GL N+PF +F +L +VFG+D A GGR +  +E+A +     + E+DM++  +DF +PNP  L+P SGE+  +T  +    AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein2.0e-5049.49Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S  +KH WT  +D  LV+CL+ LV+ G WR DNGTF+PG+  Q+ K+MKE++L  NI V+PN++S  ++ K+QY  IAEMMGP CSGF WN+ERKCIEAE
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA
        K +   WV+    A+ L N+PFP+F +L +VFG+D A GG+ +TP+E+  +     + E+DM +  +DF +PNP  L+P SGE+  +TPT+ A  AG+
Subjt:  KDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein8.0e-0724.34Show/hide
Query:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE
        S+ ++  WTP  D  L+  LV  V  G   G   TF     N++      +    +      + +R +  +R Y  I  ++    +GF W+  R  + A+
Subjt:  SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAE

Query:  KDIFEKWV----EAKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKP
         DI+  ++    EA+  R +  P +  L  +FGK+++ G   R      P P
Subjt:  KDIFEKWV----EAKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCACTAGCGCATGGAGTGCATGGCGAGATAACTTGGCGAAACGGATGTACGCTAACTGGAATAGTGTTGTTTACTATGTGCAAATGGCAGCACCAGCACCAGT
ATCAAATAATTCGAAGCACGTTTGGACCCCAGAGAAGGATGTCGTGCTTGTTCAATGTCTGGTCCACTTGGTACAGATCGGTGGTTGGCGTGGTGACAATGGCACCTTCC
GACCAGGGTTCCATAACCAAATTGGTAAGATGATGAAGGAAAGATTGTTGGGTTGCAACATCGTAGTCAGTCCAAACATTGATTCCAGGGCCAGGCTGCGAAAGAGACAG
TACATGGCCATCGCTGAAATGATGGGCCCAGCATGCAGTGGATTCGGTTGGAATGAAGAACGGAAATGCATCGAGGCAGAAAAGGATATTTTCGAGAAATGGGTCGAGGC
AAAGGGGTTGCGCAACCGACCATTCCCATGGTTTAATGAACTTGCACTGGTGTTCGGGAAGGACAGTGCACAGGGGGGAAGAGCACGCACACCCATTGAGATTGCCCCAA
AACCGGAACCTAAGGCCGACTTGGAAAACGACATGAACGTCGAGTACGATGATTTTTACGTCCCCAATCCACCTGTTCTTGATCCCACTTCGGGGGAGGAGAACTGCACT
ACACCGACAGCGAGAGCTGGAGCTGCTGGTGCTGGGCCCATCACGAACACCACAAAGGAGCAGACTGTCCATGGGGAATGTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACCACTAGCGCATGGAGTGCATGGCGAGATAACTTGGCGAAACGGATGTACGCTAACTGGAATAGTGTTGTTTACTATGTGCAAATGGCAGCACCAGCACCAGT
ATCAAATAATTCGAAGCACGTTTGGACCCCAGAGAAGGATGTCGTGCTTGTTCAATGTCTGGTCCACTTGGTACAGATCGGTGGTTGGCGTGGTGACAATGGCACCTTCC
GACCAGGGTTCCATAACCAAATTGGTAAGATGATGAAGGAAAGATTGTTGGGTTGCAACATCGTAGTCAGTCCAAACATTGATTCCAGGGCCAGGCTGCGAAAGAGACAG
TACATGGCCATCGCTGAAATGATGGGCCCAGCATGCAGTGGATTCGGTTGGAATGAAGAACGGAAATGCATCGAGGCAGAAAAGGATATTTTCGAGAAATGGGTCGAGGC
AAAGGGGTTGCGCAACCGACCATTCCCATGGTTTAATGAACTTGCACTGGTGTTCGGGAAGGACAGTGCACAGGGGGGAAGAGCACGCACACCCATTGAGATTGCCCCAA
AACCGGAACCTAAGGCCGACTTGGAAAACGACATGAACGTCGAGTACGATGATTTTTACGTCCCCAATCCACCTGTTCTTGATCCCACTTCGGGGGAGGAGAACTGCACT
ACACCGACAGCGAGAGCTGGAGCTGCTGGTGCTGGGCCCATCACGAACACCACAAAGGAGCAGACTGTCCATGGGGAATGTGGCTGA
Protein sequenceShow/hide protein sequence
METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQ
YMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVEAKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCT
TPTARAGAAGAGPITNTTKEQTVHGECG