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Spg036791 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036791
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-H2 finger protein ATL56-like
Genome locationscaffold5:45326091..45327593
RNA-Seq ExpressionSpg036791
SyntenySpg036791
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF52023.1 conserved hypothetical protein [Ricinus communis]6.0e-3960.56Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFR---GEGEGIWRSNFG------KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLL
        M +EI+VS VLL VGIAVLV IHVCIVGRAFR     G+ I   +F       K++SNE+L+ LPC++YK  EKE  +  D  CVVCLE+F +G++C+LL
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFR---GEGEGIWRSNFG------KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLL

Query:  PNCRHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN
        PNC+HSFH QCIDSWL+KTPICPICRT    PK+GLVL+QE+
Subjt:  PNCRHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN

KAE8124192.1 hypothetical protein FH972_019098 [Carpinus fangiana]1.0e-3859.03Show/hide
Query:  LEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIW-------RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCR
        +E+VVS VLL VGI VLV+IH+CI GRAFRG    I         SN  KR+S  DLE+LPC++YK  EK S +   ++C VCL++FKMG++CRLLPNCR
Subjt:  LEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIW-------RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCR

Query:  HSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQENGGVRQI
        HSFHVQCIDSWLLKTPICPICRT    PKI ++L++E    R +
Subjt:  HSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQENGGVRQI

XP_015868270.1 RING-H2 finger protein ATL74-like [Ziziphus jujuba]3.5e-3962.96Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEG-----IWRSNFG-KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNC
        MV+EIV+S +LL VGIAVLVVIHVCIVGRAF    +G     + RS+ G KR+SNEDL+ LPC++Y  G  +  +   ++C VCLE+FK GE+CRLLPNC
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEG-----IWRSNFG-KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNC

Query:  RHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVL
        RHSFH  CIDSWLLKTPICPICRTCA  PK+ ++L
Subjt:  RHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVL

XP_022954431.1 RING-H2 finger protein ATL56-like [Cucurbita moschata]5.6e-6187.97Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV
        MV+EIVVSAVLLLVGIAVLVVIHVCIVGRAFRGE EGIWRSN GK LSN+DLEKLPCYEYK GEK+S NGVDLECVVCLE FK GERCRLLPNCRHSFHV
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV

Query:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN
        +CIDSWLLKTPICPICRTCA VPK GLVL+ +N
Subjt:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN

XP_022994122.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]1.9e-6188.72Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV
        MV+EIVVSAVLLLVGIAVLVVIHVCIVGRAFRGE EGIWRSN GK LSN+DLEKLPCYEYK GEK+S NGVDLECVVCLE FK GERCRLLPNCRHSFHV
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV

Query:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN
        +CIDSWLLKTPICPICRTCAAVPK GLVL+ +N
Subjt:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN

TrEMBL top hitse value%identityAlignment
A0A5N6RPJ5 RING-type domain-containing protein4.9e-3959.03Show/hide
Query:  LEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIW-------RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCR
        +E+VVS VLL VGI VLV+IH+CI GRAFRG    I         SN  KR+S  DLE+LPC++YK  EK S +   ++C VCL++FKMG++CRLLPNCR
Subjt:  LEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIW-------RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCR

Query:  HSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQENGGVRQI
        HSFHVQCIDSWLLKTPICPICRT    PKI ++L++E    R +
Subjt:  HSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQENGGVRQI

A0A6J1GQW8 RING-H2 finger protein ATL56-like2.7e-6187.97Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV
        MV+EIVVSAVLLLVGIAVLVVIHVCIVGRAFRGE EGIWRSN GK LSN+DLEKLPCYEYK GEK+S NGVDLECVVCLE FK GERCRLLPNCRHSFHV
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV

Query:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN
        +CIDSWLLKTPICPICRTCA VPK GLVL+ +N
Subjt:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN

A0A6J1JUU5 RING-H2 finger protein ATL56-like9.3e-6288.72Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV
        MV+EIVVSAVLLLVGIAVLVVIHVCIVGRAFRGE EGIWRSN GK LSN+DLEKLPCYEYK GEK+S NGVDLECVVCLE FK GERCRLLPNCRHSFHV
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV

Query:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN
        +CIDSWLLKTPICPICRTCAAVPK GLVL+ +N
Subjt:  QCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN

A0A6P3YXL3 RING-H2 finger protein ATL74-like1.7e-3962.96Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEG-----IWRSNFG-KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNC
        MV+EIV+S +LL VGIAVLVVIHVCIVGRAF    +G     + RS+ G KR+SNEDL+ LPC++Y  G  +  +   ++C VCLE+FK GE+CRLLPNC
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEG-----IWRSNFG-KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNC

Query:  RHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVL
        RHSFH  CIDSWLLKTPICPICRTCA  PK+ ++L
Subjt:  RHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVL

B9RB46 RING-type domain-containing protein2.9e-3960.56Show/hide
Query:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFR---GEGEGIWRSNFG------KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLL
        M +EI+VS VLL VGIAVLV IHVCIVGRAFR     G+ I   +F       K++SNE+L+ LPC++YK  EKE  +  D  CVVCLE+F +G++C+LL
Subjt:  MVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFR---GEGEGIWRSNFG------KRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLL

Query:  PNCRHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN
        PNC+HSFH QCIDSWL+KTPICPICRT    PK+GLVL+QE+
Subjt:  PNCRHSFHVQCIDSWLLKTPICPICRTCAAVPKIGLVLQQEN

SwissProt top hitse value%identityAlignment
Q6NML0 E3 ubiquitin-protein ligase ATL767.7e-1342.5Show/hide
Query:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC
        RS+  K +  + L   P   Y    + +  G+  ECV+CL  F  GE+ RLLP C H FHV+CID WL     CP CR C
Subjt:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC

Q8LBA0 NEP1-interacting protein-like 21.3e-1239.29Show/hide
Query:  EGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR
        E E ++     + LS + L KLPCY   +   E        C +CL+  K GE  R LP C H+FH+ C+D WL++   CPICR
Subjt:  EGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR

Q9LS99 RING-H2 finger protein ATL771.3e-1241.77Show/hide
Query:  SNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC
        S+  K +  + L+ LP   Y    + +  GV  ECV+CL  F  GE+ R+LP C H FH++CID WL +   CP CR C
Subjt:  SNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC

Q9M0C3 RING-H2 finger protein ATL142.6e-1343.59Show/hide
Query:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR
        R  +   LS   +++LP  ++K  E  S+ G D +CVVC++ F+ G+ CR LP C H FH +C+D WL+K   CPICR
Subjt:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR

Q9ZV51 RING-H2 finger protein ATL564.5e-1336.7Show/hide
Query:  LLLVGIAVLVVIHVCI--VGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLL
        L+L+GIA ++++ + +  + R  R       R      LS+  ++KLP  ++K  E  +    + +CVVC + F+ G+ CR LP C H FH +C+D+WLL
Subjt:  LLLVGIAVLVVIHVCI--VGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLL

Query:  KTPICPICR
        K   CPICR
Subjt:  KTPICPICR

Arabidopsis top hitse value%identityAlignment
AT1G49210.1 RING/U-box superfamily protein5.4e-1442.5Show/hide
Query:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC
        RS+  K +  + L   P   Y    + +  G+  ECV+CL  F  GE+ RLLP C H FHV+CID WL     CP CR C
Subjt:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC

AT1G74410.1 RING/U-box superfamily protein9.3e-1439.29Show/hide
Query:  EGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR
        E E ++     + LS + L KLPCY   +   E        C +CL+  K GE  R LP C H+FH+ C+D WL++   CPICR
Subjt:  EGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR

AT2G18670.1 RING/U-box superfamily protein3.2e-1436.7Show/hide
Query:  LLLVGIAVLVVIHVCI--VGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLL
        L+L+GIA ++++ + +  + R  R       R      LS+  ++KLP  ++K  E  +    + +CVVC + F+ G+ CR LP C H FH +C+D+WLL
Subjt:  LLLVGIAVLVVIHVCI--VGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLL

Query:  KTPICPICR
        K   CPICR
Subjt:  KTPICPICR

AT3G18773.1 RING/U-box superfamily protein9.3e-1441.77Show/hide
Query:  SNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC
        S+  K +  + L+ LP   Y    + +  GV  ECV+CL  F  GE+ R+LP C H FH++CID WL +   CP CR C
Subjt:  SNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICRTC

AT4G30370.1 RING/U-box superfamily protein1.9e-1443.59Show/hide
Query:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR
        R  +   LS   +++LP  ++K  E  S+ G D +CVVC++ F+ G+ CR LP C H FH +C+D WL+K   CPICR
Subjt:  RSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHVQCIDSWLLKTPICPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTTCGTGTTTCAATTCAAGTACTATGGTATTGGAGATTGTGGTGTCGGCTGTTCTGTTGCTGGTGGGGATCGCTGTTTTGGTGGTGATTCATGTTTGTATTGT
TGGGAGAGCTTTCAGAGGAGAAGGGGAAGGGATTTGGAGAAGCAATTTTGGAAAGAGACTGTCAAATGAGGACTTGGAGAAGCTTCCTTGTTATGAGTACAAATTGGGGG
AAAAGGAGAGCAAAAATGGAGTGGATTTGGAATGTGTTGTCTGTTTGGAGAGTTTCAAAATGGGGGAAAGATGCAGATTGTTGCCGAATTGCAGGCACAGCTTCCATGTT
CAGTGCATAGATTCATGGCTTTTGAAGACACCCATTTGCCCAATTTGCAGAACTTGTGCTGCTGTGCCAAAAATCGGCTTGGTTTTGCAGCAGGAAAATGGTGGGGTTCG
CCAGATTCAGCTGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTTCGTGTTTCAATTCAAGTACTATGGTATTGGAGATTGTGGTGTCGGCTGTTCTGTTGCTGGTGGGGATCGCTGTTTTGGTGGTGATTCATGTTTGTATTGT
TGGGAGAGCTTTCAGAGGAGAAGGGGAAGGGATTTGGAGAAGCAATTTTGGAAAGAGACTGTCAAATGAGGACTTGGAGAAGCTTCCTTGTTATGAGTACAAATTGGGGG
AAAAGGAGAGCAAAAATGGAGTGGATTTGGAATGTGTTGTCTGTTTGGAGAGTTTCAAAATGGGGGAAAGATGCAGATTGTTGCCGAATTGCAGGCACAGCTTCCATGTT
CAGTGCATAGATTCATGGCTTTTGAAGACACCCATTTGCCCAATTTGCAGAACTTGTGCTGCTGTGCCAAAAATCGGCTTGGTTTTGCAGCAGGAAAATGGTGGGGTTCG
CCAGATTCAGCTGAATTGA
Protein sequenceShow/hide protein sequence
MLSSCFNSSTMVLEIVVSAVLLLVGIAVLVVIHVCIVGRAFRGEGEGIWRSNFGKRLSNEDLEKLPCYEYKLGEKESKNGVDLECVVCLESFKMGERCRLLPNCRHSFHV
QCIDSWLLKTPICPICRTCAAVPKIGLVLQQENGGVRQIQLN