; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036807 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036807
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnuclear transport factor 2
Genome locationscaffold5:43048219..43049214
RNA-Seq ExpressionSpg036807
SyntenySpg036807
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584071.1 Nuclear transport factor 2B, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5789.52Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+AD+VGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG+DDISSRLQQLPF+RCRHVVSTVDTQPSAVPGS+LIFVSGS+ELPDEEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNY
        QMFHLVPT +GNL VQNDIFRLNY
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNY

XP_004153658.1 nuclear transport factor 2B [Cucumis sativus]4.6e-5786.4Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+ D++GKAFVEHYYQLFDNERAS+SSLYQPDSMLTFEGQQILG+ DISS+LQQLPF+RCRHVVST+DTQPS+V GS+LIFVSGSIE+P+EEHPLRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVP+ EGNLFVQNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

XP_022933198.1 nuclear transport factor 2B [Cucurbita moschata]3.2e-5889.6Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+AD+VGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG+DDISSRLQQLPF+RCRHVVSTVDTQPSAVPGS+LIFVSGS+ELPDEEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVPT +GNL VQNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

XP_023001318.1 nuclear transport factor 2B [Cucurbita maxima]7.9e-5787.2Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+AD+VGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG+ DISSRLQQLPF+RCRHVVSTVDTQPSAVPGS+LIFVSGS+ELP+EEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVPT +GNL +QNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

XP_023519037.1 nuclear transport factor 2B [Cucurbita pepo subsp. pepo]2.7e-5788Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+ D+VGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG+DDISSRLQQLPF+RCRHVVSTVDTQPSAVPGS+LIFVSGS+ELP+EEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVPT +GNL VQNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

TrEMBL top hitse value%identityAlignment
A0A0A0LUU9 NTF2 domain-containing protein2.3e-5786.4Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+ D++GKAFVEHYYQLFDNERAS+SSLYQPDSMLTFEGQQILG+ DISS+LQQLPF+RCRHVVST+DTQPS+V GS+LIFVSGSIE+P+EEHPLRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVP+ EGNLFVQNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

A0A1S3B3B7 nuclear transport factor 28.6e-5784.68Show/hide
Query:  EEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQ
        EEQ D++GKAFVEHYY LFDNERAS+SSLYQPDSMLTFEGQQILG++DIS++LQQLPF+RCRHVVST+DTQPS+VPGS+LIFVSGSIE+P+EEHPLR+SQ
Subjt:  EEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQ

Query:  MFHLVPTLEGNLFVQNDIFRLNYG
        MFHLVP+ +GNLFVQNDIFRLNYG
Subjt:  MFHLVPTLEGNLFVQNDIFRLNYG

A0A6J1CEC9 nuclear transport factor 24.7e-5584Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE++++VG+AFVEHYYQLFDNERAS+SSLYQP+SMLTFEGQ+ILG+DDISSRLQQLPF+RCRHVVST+DTQPSA  GS+LIFVSGS+ELP EEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVPT +G+LFVQNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

A0A6J1F427 nuclear transport factor 2B1.6e-5889.6Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+AD+VGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG+DDISSRLQQLPF+RCRHVVSTVDTQPSAVPGS+LIFVSGS+ELPDEEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVPT +GNL VQNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

A0A6J1KQ62 nuclear transport factor 2B3.8e-5787.2Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        MEE+AD+VGKAFVEHYYQLFDNER S+S+LYQPDSMLTFEGQQILG+ DISSRLQQLPF+RCRHVVSTVDTQPSAVPGS+LIFVSGS+ELP+EEH LRFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGNLFVQNDIFRLNYG
        QMFHLVPT +GNL +QNDIFRLNYG
Subjt:  QMFHLVPTLEGNLFVQNDIFRLNYG

SwissProt top hitse value%identityAlignment
Q10100 Nuclear transport factor 22.0e-2649.12Show/hide
Query:  FVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHLVPTLEG
        F + YYQ FD++R+ +SSLY+ +SML+FEG Q+ G   I  +L  LPF R +H +ST+D QP+   GSV++ V+G + L +E+   R+SQ+FHLV    G
Subjt:  FVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHLVPTLEG

Query:  NLFVQNDIFRLNYG
        N +V ND+FRLNYG
Subjt:  NLFVQNDIFRLNYG

Q6FRC6 Nuclear transport factor 21.1e-2443.2Show/hide
Query:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS
        M    + + + F E YY  FD++R+ + +LY+ +SMLTFE  Q+ G   I  +L  LPF +  H ++T+D QP++  G VL+ ++G + + DE++P RFS
Subjt:  MEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFS

Query:  QMFHLVPTLEGN-LFVQNDIFRLNY
        Q+FHL+P  +GN  +V NDIFRLNY
Subjt:  QMFHLVPTLEGN-LFVQNDIFRLNY

Q9C7F5 Nuclear transport factor 2B1.0e-3557.98Show/hide
Query:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL
        D V KAFVEHYY  FD  R  ++ LYQ  SMLTFEGQ+I G+  I ++L  LPF +C+H +STVD QPS     +L+FVSG+++L  EEH L+FSQMFHL
Subjt:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL

Query:  VPTLEGNLFVQNDIFRLNY
        +PT +G+ +V NDIFRLNY
Subjt:  VPTLEGNLFVQNDIFRLNY

Q9FZK4 Nuclear transport factor 2A2.9e-3357.14Show/hide
Query:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL
        D V KAFVEHYY  FD  R  + SLYQ  SMLTFEGQ+I G  +I ++L  LPF +C+H ++TVD QPS   G +L+FVSG+++L  E+H L+FSQMFHL
Subjt:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL

Query:  VPTLEGNLFVQNDIFRLNY
        +   +GN +V NDIFRLNY
Subjt:  VPTLEGNLFVQNDIFRLNY

Q9XJ54 Nuclear transport factor 21.8e-3559.5Show/hide
Query:  ADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFH
        AD V KAFVEHYY+ FD  R ++ SLYQ  SMLTFEGQQ LG   I+ +L  LPF +C H ++TVD QPS   G +L+FVSGS+    +EHPL+FSQMF 
Subjt:  ADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFH

Query:  LVPTLEGNLFVQNDIFRLNYG
        L+P   GN +VQND+FRLNYG
Subjt:  LVPTLEGNLFVQNDIFRLNYG

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like8.5e-3358.41Show/hide
Query:  QVEKEMEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVP---GSVLIFVSGSIELPD
        +  K +EE+   V  AFV HYY LFDN+R+S+SSLY P S+LTFEGQ I G+D+IS++L+QLPFD+C H++STVD+QPS++    G +L+FVSGSI+L  
Subjt:  QVEKEMEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVP---GSVLIFVSGSIELPD

Query:  EEHPLRFSQMFHL
        E+HPLRFSQ++ L
Subjt:  EEHPLRFSQMFHL

AT1G11570.2 NTF2-like6.3e-4460.9Show/hide
Query:  QVEKEMEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVP---GSVLIFVSGSIELPD
        +  K +EE+   V  AFV HYY LFDN+R+S+SSLY P S+LTFEGQ I G+D+IS++L+QLPFD+C H++STVD+QPS++    G +L+FVSGSI+L  
Subjt:  QVEKEMEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVP---GSVLIFVSGSIELPD

Query:  EEHPLRFSQMFHLVPTLEGNLFVQNDIFRLNYG
        E+HPLRFSQ FHL+P L+G+ FVQN++FRLNYG
Subjt:  EEHPLRFSQMFHLVPTLEGNLFVQNDIFRLNYG

AT1G27310.1 nuclear transport factor 2A2.0e-3457.14Show/hide
Query:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL
        D V KAFVEHYY  FD  R  + SLYQ  SMLTFEGQ+I G  +I ++L  LPF +C+H ++TVD QPS   G +L+FVSG+++L  E+H L+FSQMFHL
Subjt:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL

Query:  VPTLEGNLFVQNDIFRLNY
        +   +GN +V NDIFRLNY
Subjt:  VPTLEGNLFVQNDIFRLNY

AT1G27970.1 nuclear transport factor 2B7.4e-3757.98Show/hide
Query:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL
        D V KAFVEHYY  FD  R  ++ LYQ  SMLTFEGQ+I G+  I ++L  LPF +C+H +STVD QPS     +L+FVSG+++L  EEH L+FSQMFHL
Subjt:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL

Query:  VPTLEGNLFVQNDIFRLNY
        +PT +G+ +V NDIFRLNY
Subjt:  VPTLEGNLFVQNDIFRLNY

AT1G27970.2 nuclear transport factor 2B2.6e-3456.52Show/hide
Query:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL
        D V KAFVEHYY  FD  R  ++ LYQ  SMLTFEGQ+I G+  I ++L  LPF +C+H +STVD QPS     +L+FVSG+++L  EEH L+FSQMFHL
Subjt:  DLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIELPDEEHPLRFSQMFHL

Query:  VPTLEGNLFVQNDIF
        +PT +G+ +V NDIF
Subjt:  VPTLEGNLFVQNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTATTGGCCTTTACAAACTTCATCCCAATCAAAATTCACAGCTTTCAAGTAGAGAAAGAGATGGAAGAACAGGCTGATTTAGTGGGCAAGGCGTTTGTGGAACATTATTA
CCAATTGTTCGACAACGAAAGAGCCTCTATTTCTTCTTTGTACCAGCCTGACTCTATGCTCACTTTCGAAGGCCAGCAAATCTTAGGCCTTGACGACATCTCCTCTAGGC
TTCAGCAATTGCCATTTGACCGTTGCCGACATGTCGTCAGCACCGTCGACACGCAGCCCTCCGCCGTCCCTGGCTCCGTCCTCATCTTCGTCAGCGGCAGCATCGAGCTG
CCCGACGAAGAACACCCGTTGAGATTCAGTCAGATGTTCCACTTGGTACCCACGTTAGAGGGCAACCTCTTCGTTCAGAACGACATTTTTCGCCTCAATTATGGTTAG
mRNA sequenceShow/hide mRNA sequence
CTATTGGCCTTTACAAACTTCATCCCAATCAAAATTCACAGCTTTCAAGTAGAGAAAGAGATGGAAGAACAGGCTGATTTAGTGGGCAAGGCGTTTGTGGAACATTATTA
CCAATTGTTCGACAACGAAAGAGCCTCTATTTCTTCTTTGTACCAGCCTGACTCTATGCTCACTTTCGAAGGCCAGCAAATCTTAGGCCTTGACGACATCTCCTCTAGGC
TTCAGCAATTGCCATTTGACCGTTGCCGACATGTCGTCAGCACCGTCGACACGCAGCCCTCCGCCGTCCCTGGCTCCGTCCTCATCTTCGTCAGCGGCAGCATCGAGCTG
CCCGACGAAGAACACCCGTTGAGATTCAGTCAGATGTTCCACTTGGTACCCACGTTAGAGGGCAACCTCTTCGTTCAGAACGACATTTTTCGCCTCAATTATGGTTAG
Protein sequenceShow/hide protein sequence
LLAFTNFIPIKIHSFQVEKEMEEQADLVGKAFVEHYYQLFDNERASISSLYQPDSMLTFEGQQILGLDDISSRLQQLPFDRCRHVVSTVDTQPSAVPGSVLIFVSGSIEL
PDEEHPLRFSQMFHLVPTLEGNLFVQNDIFRLNYG