CuGenDBv2

Gene ID	Spg036831
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein ROOT INITIATION DEFECTIVE 3-like
Genome location	scaffold5:44303285..44306112
RNA-Seq Expression	Spg036831
Synteny	Spg036831
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process) GO:0005656 - nuclear pre-replicative complex (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0097344 - Rix1 complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR019775 - WD40 repeat, conserved site IPR020472 - G-protein beta WD-40 repeat IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0055324.1 protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo var. makuwa]

3.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

TYJ99249.1 protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo var. makuwa]

3.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

XP_016899510.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo]

3.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

XP_016899511.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo]

3.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

XP_038894085.1 protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Benincasa hispida]

3.6e-225

85.38

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M   GE+M LA+CSD+NMGSGITI DVKTG+TLLHIPTCASPPYGL CLRNEFLVASQTRK GSVGGGSIFIWSLNKPQPP+ SY LEPIGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLK+W+G  KPIK +LFSWDDSFLI GSADGMICVWSMI LLDVELVG+SQPI YC+MEH SSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SL+GSLKFWDLMSGM+RGTQAH EGITAIVLHPTEQLLFSG+ DG+IFASRL FGLDN I IKENQLLAPKGHKGAITALAFSQ+DL+SASEDCT+C W
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNL+A+PRSSLISTSNRKRVLN FSMSSLDKYPQPANLL+STIPL PSLQPLRENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVARTR
        IQMKVETSLERR+WAS+MTKQVM+MNNHLQSRLLDMMRIRLFGP +I+SSSKKRKDERDRVARTR
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVARTR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LR59 WD_REPEATS_REGION domain-containing protein

3.2e-219

83.66

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIPTCASPPYG  CLRNEF VASQTRK GSVGGGSIFIWSLNKP PP+ SY LE IGPLASTKD V
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSG+LLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELVG+SQPI YC+MEH SSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM+RGTQAHIEGITAIVLHPTEQ+LFSG++DGQIFASRLEFG DN I I+ENQ+LAPKGHKGAITALAFSQ+ L+SASEDCTVCI 
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRV N  SMSSLDKYPQPANL++STIPL  S+QPL ENLNSI F              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVARTR
        IQMKVETSLERRMWASRMTK+VM+MNNHLQSRLLDMMRIRLF PA+I+SSSKK+KDERDRVA+ R
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVARTR

A0A1S4DU43 protein ROOT INITIATION DEFECTIVE 3-like isoform X2

1.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

A0A1S4DUX3 protein ROOT INITIATION DEFECTIVE 3-like isoform X1

1.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

A0A5A7UJJ9 Protein ROOT INITIATION DEFECTIVE 3-like isoform X2

1.8e-222

84.02

Show/hide

Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

A0A5D3BJZ3 Protein ROOT INITIATION DEFECTIVE 3-like isoform X2

1.8e-222

84.02

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Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV
        M NGGE MALAVCSD+NMG GITI DVKTG+TLLHIP+CASPPYG  CLRNEF VASQTRK GSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKDSV
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSV

Query:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS
        YLAGG HSGNIHLWEVGSGKLLKLW+GHHKP+K +LFSWDDSFLI GS+DGMICVWSMI LLDVELV +SQP+ YC+M+HKSSLTGLLTMSGCSMSIIIS
Subjt:  YLAGGAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIIS

Query:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW
         SLDGSLKFWDLMSGM++GTQAHIEGITAIVLHPTEQ+LFSG++DGQI ASRLE G DN I +KENQ+LAPKGHKGAITALAFSQ DL+SASEDCTVCIW
Subjt:  CSLDGSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA
        DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLN FSMSSLDKYPQPANL++STIPL  SLQPL+ENLNSIGF              T+GTSAA
Subjt:  DISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGF--------------TKGTSAA

Query:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR
        IQMKVETSLERRMWASRMTKQVM+MNNHLQSR+LDMMRIRLF P +INSSSKK+KDERDRVA+
Subjt:  IQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKRKDERDRVAR

SwissProt top hits

e value

%identity

Alignment

A0A1L8HX76 WD repeat-containing protein 18

4.9e-31

29.36

Show/hide

Query:  TISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDSVYLAGGAHSGNIHLWEVGSGKL
        T+ +  TG  LL      +   GL  L  ++L+       G +G   I +W L  + Q   +     P+  L+++ + +YL  G  + +I+LWEV +G L
Subjt:  TISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDSVYLAGGAHSGNIHLWEVGSGKL

Query:  LKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDLMSGMVRGTQ
        L + N H++ +  + F+ D S +I+G+ D ++ VW +  +L VE     +P RY    H   +T +    G   + + + SLD ++K WD+ SG +  + 
Subjt:  LKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDLMSGMVRGTQ

Query:  AHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLD-NFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCIWDISSQRIIQKLDHKKGRI
             IT++   P E  LF G  DG I+   L    +         Q +  KGH+  +T L+ S     L+S S D TVC+WDI S++ ++ + H +G +
Subjt:  AHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLD-NFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCIWDISSQRIIQKLDHKKGRI

Query:  TN--LVAIPRSSLISTSNRKRVLNHFS
        TN  ++A P + L + S     L HFS
Subjt:  TN--LVAIPRSSLISTSNRKRVLNHFS

Q3SZD4 WD repeat-containing protein 18

3.6e-26

27.83

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Query:  MALAVCSDKNMGS-GITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDSVYLAGG
        M +AVC+D         + ++ +G  LL      + P GL  L  E+L+A+Q      +G   I  W L  K Q   +     P+  L ++ + +Y+  G
Subjt:  MALAVCSDKNMGS-GITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDSVYLAGG

Query:  AHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDG
          S NI+LWEV +G LL + + H++ +  + F+ D S  I+G  D ++  WS+  +L  +   +  P R+    H   +T L    G  ++ + + SLD 
Subjt:  AHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDG

Query:  SLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRL---EFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCIW
        ++K W++ SG +  +     GI A+ +   E  +F G  DG IF   L       +     ++      +GH+  +T L+ S     L+S S D TV +W
Subjt:  SLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRL---EFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCIW

Query:  DISSQRIIQKLDHKKGRITN--LVAIPRSSLISTSNRKRVLNHFS
        D+ SQ+ ++ +   KG +TN  ++  P S L S       L HF+
Subjt:  DISSQRIIQKLDHKKGRITN--LVAIPRSSLISTSNRKRVLNHFS

Q68EI0 WD repeat-containing protein 18

3.7e-23

25.23

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Query:  ISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEP--IGPLASTKDSVYLAGGAHSGNIHLWEVGSGKL
        + D  TG   L      +    L  L  E+++ +Q      +G   I +W + + +  L+   + P  +  L ++ D +Y+  G     I+LWEV +G L
Subjt:  ISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEP--IGPLASTKDSVYLAGGAHSGNIHLWEVGSGKL

Query:  LKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDLMSGMVRGTQ
        L + + H + +  I F+ D S  ++G  D +  +W++  ++ ++   + +P R+ +  H   +T +        + + + SLD ++K W++ SG +  + 
Subjt:  LKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDLMSGMVRGTQ

Query:  AHIEGITAIVLHPTEQLLFSGSIDGQIFASRL---EFGLDNFIAIKENQLLAPKGHKGAITALAFSQ--VDLVSASEDCTVCIWDISSQRIIQKLDHKKG
            GI ++   P E  LF G  DG IF   L       D             KGH+  +T L+ S     L+S S D TV +WD+ S++ I  ++H +G
Subjt:  AHIEGITAIVLHPTEQLLFSGSIDGQIFASRL---EFGLDNFIAIKENQLLAPKGHKGAITALAFSQ--VDLVSASEDCTVCIWDISSQRIIQKLDHKKG

Query:  RITN--LVAIPRSSLISTSNRKRVLNHFS
         +TN  ++  P +  +S S+    L  FS
Subjt:  RITN--LVAIPRSSLISTSNRKRVLNHFS

Q9BV38 WD repeat-containing protein 18

6.8e-25

28.32

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Query:  MALAVCSDK--NMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDSVYLAG
        M +AVC+D    M S I + ++ +G  LL      + P GL  L  E+L+A+Q      +G   I  W L  K Q   +     P+  L ++ + +Y+  
Subjt:  MALAVCSDK--NMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDSVYLAG

Query:  GAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLD
        G  + +IHLWEV +G LL + + H++ +  + F+ D S  I+G  D ++ VWS+  +L  +      P R+    H   +T L    G  ++ + + SLD
Subjt:  GAHSGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLD

Query:  GSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRL---EFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCI
         ++K W++ SG +  +      I A+ +   E  +F G  +G IF   L       +     +++     KGH+  +T L+ S     L+S S D TV +
Subjt:  GSLKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRL---EFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCI

Query:  WDISSQRIIQKLDHKKGRITN--LVAIPRSSLISTSNRKRVLNHFS
        WD+ S++ I+ +   KG +TN  ++  P S L S       L HF+
Subjt:  WDISSQRIIQKLDHKKGRITN--LVAIPRSSLISTSNRKRVLNHFS

Q9M3B4 Protein ROOT INITIATION DEFECTIVE 3

6.5e-52

32.49

Show/hide

Query:  MALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSVYLAGGAH
        M + V +  ++  GI   D+KTG   L    CASP +GL  +  +FL +SQ     +   GSIF WS  KPQ  ++SYP+EPI  LA+  +  YL GG  
Subjt:  MALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSVYLAGGAH

Query:  SGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLL-DVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGS
        SG+I+LWEV +GKLLK W+GH++ +  ++FS DDS L++GS DG I VWS+IRL  D +    +    +   EH  S+T ++   G   ++IIS S D +
Subjt:  SGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLL-DVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGS

Query:  LKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKG-AITALAFSQVD--LVSASEDCTVCIWDIS
         K W L  G +         I A+ L P   + ++G+ D +I+      G  N  +    Q+L     KG AIT LA+      L+S SED  VC+WD  
Subjt:  LKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKG-AITALAFSQVD--LVSASEDCTVCIWDIS

Query:  SQRIIQKLDHKKGR---ITNLVAIPRSSLISTSNRKRV----LNHFSMSSLDKYPQPA-NLLESTIPLLP---SLQPLRENLNSIGFTKGTSAAIQMKVE
        S R ++ L H KG      N + I R ++++ SN+ +V            L+KY +P  + ++  + + P   S  P+  +  S          +Q +  
Subjt:  SQRIIQKLDHKKGR---ITNLVAIPRSSLISTSNRKRV----LNHFSMSSLDKYPQPA-NLLESTIPLLP---SLQPLRENLNSIGFTKGTSAAIQMKVE

Query:  TSLERRMWASRMT-KQVMEMNNHLQSRLLDMMRI
         + E  M   ++  K+ ++MN   Q    +++++
Subjt:  TSLERRMWASRMT-KQVMEMNNHLQSRLLDMMRI

Arabidopsis top hits

e value

%identity

Alignment

AT3G49180.1 Transducin/WD40 repeat-like superfamily protein

4.6e-53

32.49

Show/hide

Query:  MALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSVYLAGGAH
        M + V +  ++  GI   D+KTG   L    CASP +GL  +  +FL +SQ     +   GSIF WS  KPQ  ++SYP+EPI  LA+  +  YL GG  
Subjt:  MALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSVYLAGGAH

Query:  SGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLL-DVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGS
        SG+I+LWEV +GKLLK W+GH++ +  ++FS DDS L++GS DG I VWS+IRL  D +    +    +   EH  S+T ++   G   ++IIS S D +
Subjt:  SGNIHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLL-DVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGS

Query:  LKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKG-AITALAFSQVD--LVSASEDCTVCIWDIS
         K W L  G +         I A+ L P   + ++G+ D +I+      G  N  +    Q+L     KG AIT LA+      L+S SED  VC+WD  
Subjt:  LKFWDLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKG-AITALAFSQVD--LVSASEDCTVCIWDIS

Query:  SQRIIQKLDHKKGR---ITNLVAIPRSSLISTSNRKRV----LNHFSMSSLDKYPQPA-NLLESTIPLLP---SLQPLRENLNSIGFTKGTSAAIQMKVE
        S R ++ L H KG      N + I R ++++ SN+ +V            L+KY +P  + ++  + + P   S  P+  +  S          +Q +  
Subjt:  SQRIIQKLDHKKGR---ITNLVAIPRSSLISTSNRKRV----LNHFSMSSLDKYPQPA-NLLESTIPLLP---SLQPLRENLNSIGFTKGTSAAIQMKVE

Query:  TSLERRMWASRMT-KQVMEMNNHLQSRLLDMMRI
         + E  M   ++  K+ ++MN   Q    +++++
Subjt:  TSLERRMWASRMT-KQVMEMNNHLQSRLLDMMRI

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein

5.2e-12

23.75

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Query:  EPIGPLASTKDSVYLAGGAHSGNIHLWEVGSGKLLK-LWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTG
        +P+  +   +D   +   ++ G   +W+ G+G  +K L +  + P+ F+ FS +  F++ G+ D  + +W++     ++        +YC+    S   G
Subjt:  EPIGPLASTKDSVYLAGGAHSGNIHLWEVGSGKLLK-LWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTG

Query:  LLTMSGCSMSIIISCSLDGSLKFWDLMS-GMVRGTQAHIEGITAIVLHPTEQLLFSGSID
           +SG         S D  +  W+L S  +++  + H E +  +  HPTE L+ SGS+D
Subjt:  LLTMSGCSMSIIISCSLDGSLKFWDLMS-GMVRGTQAHIEGITAIVLHPTEQLLFSGSID

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein

1.5e-11

21.93

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Query:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYP--LEPIGPLASTKD
        M +GG   +  V +  + G+  T  +V   +   H+ T       + C++  F        + SV   ++ +WS       +  Y      I  LA + D
Subjt:  MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYP--LEPIGPLASTKD

Query:  SVYLAGGAHSGNIHLWEVGSG-KLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELV-GSSQPIRYCVMEHKSSLTGLLTMSGCSMS
        S Y    +    + +W+  S  + LK+  GH   +  + F+   + +++GS D  I +W +     V ++   S PI         SL            
Subjt:  SVYLAGGAHSGNIHLWEVGSG-KLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELV-GSSQPIRYCVMEHKSSLTGLLTMSGCSMS

Query:  IIISCSLDGSLKFWDLMSGMVRGT--QAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD---LVSA
         I+S S DGS K WD   G    T        ++     P  + +   ++D  +        L N+   K  ++     +K      AFS  +   +VS 
Subjt:  IIISCSLDGSLKFWDLMSGMVRGT--QAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD---LVSA

Query:  SEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPRSSLISTS
        SED  V +WD+ ++ I+Q+L+     + ++   P  + IS+S
Subjt:  SEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPRSSLISTS

AT4G15900.1 pleiotropic regulatory locus 1

3.7e-10

20.81

Show/hide

Query:  KLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIR-LLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDL-MSGMV
        K  ++  GH   ++ + F   + +   GSAD  I +W +   +L + L G  + +R   + ++              + + S   D  +K WDL  + ++
Subjt:  KLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIR-LLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDL-MSGMV

Query:  RGTQAHIEGITAIVLHPTEQLLFSGSIDG--QIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCIWDISSQRIIQKLDH
        R    H+ G+  + LHPT  +L +G  D   +++  R +            Q+ A  GH   + ++     D  +V+ S D T+  WD+   + +  L H
Subjt:  RGTQAHIEGITAIVLHPTEQLLFSGSIDG--QIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVD--LVSASEDCTVCIWDISSQRIIQKLDH

Query:  KKGRITNLVAIPRSSLISTSN
         K  +  +   P+ +  ++++
Subjt:  KKGRITNLVAIPRSSLISTSN

AT5G25150.1 TBP-associated factor 5

5.7e-11

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Query:  IHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFW
        I LW       L  + GH+ P+    FS    +  + S D    +WSM R+  + ++        CV  H             + + I + S D +++ W
Subjt:  IHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFW

Query:  DLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAP-KGHKGAITALAFSQVD--LVSASEDCTVCIWDISSQRI
        D+ +G         E +   + H +  L  + S DG+  AS  E G      +   + + P  GH   + +L++S     L S S DCTV +WD++S   
Subjt:  DLMSGMVRGTQAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAP-KGHKGAITALAFSQVD--LVSASEDCTVCIWDISSQRI

Query:  IQKLDHKKG---RITNLVAIPRSS
        + K + K G   R+ +L   P  S
Subjt:  IQKLDHKKG---RITNLVAIPRSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCAATGGAGGCGAAAGAATGGCGTTGGCTGTGTGCAGCGACAAGAACATGGGATCGGGGATTACGATTTCGGATGTGAAAACAGGCGAAACTCTCCTTCACATTCC
GACCTGCGCTTCGCCTCCGTACGGTTTGTTTTGCTTGAGAAATGAGTTCCTCGTTGCTTCTCAGACTCGTAAGGCAGGGTCAGTCGGTGGTGGATCCATCTTCATTTGGT
CCCTGAACAAGCCTCAACCCCCTCTTAGGAGCTATCCATTGGAGCCCATTGGACCACTTGCCTCAACAAAGGATAGTGTATATCTCGCAGGCGGAGCTCATTCTGGAAAT
ATTCATCTTTGGGAGGTTGGTAGTGGTAAATTGCTCAAGCTTTGGAATGGTCACCATAAACCCATAAAATTCATCCTGTTTTCTTGGGACGATTCGTTTCTTATTGCTGG
TTCAGCCGATGGAATGATTTGCGTCTGGTCCATGATTCGTTTGCTGGATGTGGAACTTGTGGGAAGCTCACAGCCAATACGGTATTGTGTAATGGAACATAAGTCATCTT
TAACTGGTCTACTCACTATGTCTGGCTGCTCGATGTCGATAATCATTTCATGCTCCCTTGATGGCAGTTTAAAGTTTTGGGATTTAATGTCAGGAATGGTCAGGGGAACT
CAAGCTCATATAGAAGGGATCACTGCGATTGTTCTTCACCCAACCGAGCAACTCTTGTTCTCTGGGAGCATTGACGGGCAAATTTTTGCTAGCAGGCTTGAATTTGGATT
GGATAACTTTATTGCCATTAAAGAAAACCAGTTACTTGCACCAAAAGGACACAAAGGAGCTATTACTGCGCTGGCCTTCAGTCAGGTGGATCTAGTTTCCGCATCTGAGG
ATTGCACCGTCTGCATATGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCACAAGAAAGGGAGAATAACCAACTTGGTAGCAATTCCACGATCGTCCCTGATC
TCCACGTCAAACCGTAAGAGAGTCTTGAATCATTTCTCCATGTCCTCACTCGACAAGTATCCTCAGCCTGCCAACTTGTTGGAGAGCACAATACCTCTCTTGCCCTCCCT
CCAACCCCTCAGGGAGAATCTGAATTCCATTGGTTTCACAAAAGGGACGTCAGCAGCAATACAGATGAAAGTAGAAACAAGTTTAGAGAGACGAATGTGGGCTTCCAGAA
TGACAAAGCAAGTAATGGAGATGAACAACCATCTTCAATCACGGTTACTAGACATGATGCGGATTCGATTGTTCGGGCCTGCAAGAATTAACTCGTCCTCAAAGAAACGT
AAAGATGAAAGAGATCGAGTTGCAAGGACGAGGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSNGGERMALAVCSDKNMGSGITISDVKTGETLLHIPTCASPPYGLFCLRNEFLVASQTRKAGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDSVYLAGGAHSGN
IHLWEVGSGKLLKLWNGHHKPIKFILFSWDDSFLIAGSADGMICVWSMIRLLDVELVGSSQPIRYCVMEHKSSLTGLLTMSGCSMSIIISCSLDGSLKFWDLMSGMVRGT
QAHIEGITAIVLHPTEQLLFSGSIDGQIFASRLEFGLDNFIAIKENQLLAPKGHKGAITALAFSQVDLVSASEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPRSSLI
STSNRKRVLNHFSMSSLDKYPQPANLLESTIPLLPSLQPLRENLNSIGFTKGTSAAIQMKVETSLERRMWASRMTKQVMEMNNHLQSRLLDMMRIRLFGPARINSSSKKR
KDERDRVARTR

Spg036831 (gene) of Sponge gourd (cylindrica) v1 genome