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Spg036861 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036861
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUPF0426 protein At1g28150, chloroplastic
Genome locationscaffold5:48316059..48318028
RNA-Seq ExpressionSpg036861
SyntenySpg036861
Gene Ontology termsGO:0043086 - negative regulation of catalytic activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domainsIPR040278 - UPF0426 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137400.1 UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]6.3e-4576.15Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++LF      MGKLK RNHNSILSSK  KP+R ++  LG NNSTNGI AFFFNP  DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

XP_008439829.1 PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]2.5e-4677.69Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++LF      MGKLK R+H+SILSSK  KPMR ++L LG NNSTNGI AFFFNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]8.2e-4575.38Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++L      GMGK +E N +SI S K  KPMR   L LGC+NSTNGICAF FNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

XP_023518976.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]4.1e-4474.62Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++L      GMGK +E N + I S K  KPMR   L LGC+NSTNGICAF FNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

XP_038893812.1 UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]9.6e-4676.15Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++LF      MGKLK RNH+SILSS   KP+RG +L L CNN TNGI AFFFNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAG+TEE+DTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

TrEMBL top hitse value%identityAlignment
A0A0A0LT92 Uncharacterized protein3.0e-4576.15Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++LF      MGKLK RNHNSILSSK  KP+R ++  LG NNSTNGI AFFFNP  DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic1.2e-4677.69Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++LF      MGKLK R+H+SILSSK  KPMR ++L LG NNSTNGI AFFFNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein1.2e-4677.69Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++LF      MGKLK R+H+SILSSK  KPMR ++L LG NNSTNGI AFFFNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic4.0e-4575.38Show/hide
Query:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
        +++  S++++L      GMGK +E N +SI S K  KPMR   L LGC+NSTNGICAF FNP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV
Subjt:  IINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE
        KKTVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  KKTVESAGITEEVDTQGSVQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic3.3e-4484.07Show/hide
Query:  GMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQG
        GMGK +E N +SI S K  KPMR   L LGCNNSTN ICAF F P EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQG
Subjt:  GMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

SwissProt top hitse value%identityAlignment
P74786 UPF0426 protein ssl02941.2e-0640.3Show/hide
Query:  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ P  I+I+
Subjt:  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDGPTEIEIE

Q9FZ89 UPF0426 protein At1g28150, chloroplastic2.7e-1964.86Show/hide
Query:  FNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G V   ED P +IEIE
Subjt:  FNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE

Arabidopsis top hitse value%identityAlignment
AT1G28150.1 unknown protein2.0e-2064.86Show/hide
Query:  FNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G V   ED P +IEIE
Subjt:  FNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGTCAATTGCGAGCGAAATTAAACAAACGATTGAAGCCATTACCTCCCAAATATCTTCAGCCTCTTCTTCCAGCCTTCGTTCACTCTGAAGCAAGAGCATTAGC
ATCATCGGAGATTATCAATGGCGGGTCTTCTTCTACACTCCTCTTCAACTGCCAGCGTTCTGGAATGGGGAAACTAAAGGAACGGAATCATAATTCAATTTTATCATCCA
AGAAACGGAAACCTATGCGTGGCACCTATCTTCCTCTTGGTTGCAATAATTCTACAAATGGCATCTGCGCCTTTTTCTTCAATCCTGCAGAGGATCCCGTCATCAAAGAA
GCTCTGAAGGAGCCGGTTGCTTTCGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCTGC
TGGAATCACAGAAGAAGTTGACACTCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATTGAGATTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGTCAATTGCGAGCGAAATTAAACAAACGATTGAAGCCATTACCTCCCAAATATCTTCAGCCTCTTCTTCCAGCCTTCGTTCACTCTGAAGCAAGAGCATTAGC
ATCATCGGAGATTATCAATGGCGGGTCTTCTTCTACACTCCTCTTCAACTGCCAGCGTTCTGGAATGGGGAAACTAAAGGAACGGAATCATAATTCAATTTTATCATCCA
AGAAACGGAAACCTATGCGTGGCACCTATCTTCCTCTTGGTTGCAATAATTCTACAAATGGCATCTGCGCCTTTTTCTTCAATCCTGCAGAGGATCCCGTCATCAAAGAA
GCTCTGAAGGAGCCGGTTGCTTTCGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCTGC
TGGAATCACAGAAGAAGTTGACACTCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATTGAGATTGAATGA
Protein sequenceShow/hide protein sequence
MFGQLRAKLNKRLKPLPPKYLQPLLPAFVHSEARALASSEIINGGSSSTLLFNCQRSGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKE
ALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGPTEIEIE