; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036867 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036867
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBHLH domain-containing protein
Genome locationscaffold5:45924695..45927772
RNA-Seq ExpressionSpg036867
SyntenySpg036867
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573012.1 putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2387.5Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

KAG7012197.1 Transcription factor PRE3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2387.5Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

XP_004152438.1 transcription factor PRE3 [Cucumis sativus]3.6e-2387.5Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

XP_016899225.1 PREDICTED: transcription factor PRE3-like [Cucumis melo]7.3e-2488.89Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+GVRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

XP_022955105.1 transcription factor PRE3-like [Cucurbita moschata]3.6e-2387.5Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ1 BHLH domain-containing protein1.7e-2387.5Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

A0A1S4DU40 transcription factor PRE3-like3.5e-2488.89Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+GVRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

A0A5D3BJ22 Transcription factor PRE3-like5.6e-2288.24Show/hide
Query:  SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        SRSRQS+GVRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

A0A6J1GU92 transcription factor PRE3-like1.7e-2387.5Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

A0A6J1K5U5 transcription factor PRE3-like1.5e-2286.11Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSG SRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSA+KVLQETCNYIRSLHREVDDLS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

SwissProt top hitse value%identityAlignment
A2Z730 Transcription factor ILI74.4e-1669.12Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLS
        MS RSRSR S+  RI+DEQI DLV KLQ LLPE R   R +D+V +++VLQETC+YIRSLHREVDDLS
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLS

B8APB5 Transcription factor ILI61.2e-1667.61Show/hide
Query:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        S RSRSRQS   RI+DEQI+DLV KLQ LLPE R   R +D+V +S+VLQETCNYIRSLH+EVDDLS  ++
Subjt:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

Q0DUR2 Transcription factor ILI61.2e-1667.61Show/hide
Query:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        S RSRSRQS   RI+DEQI+DLV KLQ LLPE R   R +D+V +S+VLQETCNYIRSLH+EVDDLS  ++
Subjt:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

Q8GW32 Transcription factor PRE65.6e-1964.13Show/hide
Query:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNITVYKSSNKIGIDNSDHSEI
        MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+RR  R SDKVSASKVLQETCNYIR+LHREVDDLS  ++   +S     DNS  + I
Subjt:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNITVYKSSNKIGIDNSDHSEI

Q9CA64 Transcription factor PRE33.6e-1870.27Show/hide
Query:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSG RSRSRQS+G  RIS++QI DL+ KLQQLLPE+ R++R SDKVSA++VLQ+TCNYIR+LHREVDDLS  ++
Subjt:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.0e-2064.13Show/hide
Query:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNITVYKSSNKIGIDNSDHSEI
        MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+RR  R SDKVSASKVLQETCNYIR+LHREVDDLS  ++   +S     DNS  + I
Subjt:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNITVYKSSNKIGIDNSDHSEI

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 12.6e-1970.27Show/hide
Query:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MSG RSRSRQS+G  RIS++QI DL+ KLQQLLPE+ R++R SDKVSA++VLQ+TCNYIR+LHREVDDLS  ++
Subjt:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein2.0e-1663.89Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MS R   + S   RISD+Q+ DLV KL+Q LPEI    R SDKVSASKVLQETCNYIR LHREVD+LS  ++
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

AT3G47710.1 BANQUO 31.3e-1561.97Show/hide
Query:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        S +SRSRQ+    I+DEQI DLV +L +LLPE+  NNR S KVSAS+VLQETC+YIR+L +EVDDLS  ++
Subjt:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT

AT5G15160.1 BANQUO 23.1e-1765.75Show/hide
Query:  MSGRSRSRQ-SAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT
        MS   RSRQ S+  RISD+QITDL+ KL+Q +PEIR+ NR S+ VSASKVLQETCNYIR+L++E DDLS  +T
Subjt:  MSGRSRSRQ-SAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCAGATCTCGTTCGAGGCAATCAGCTGGTGTAAGAATCAGCGACGAGCAGATCACGGACCTCGTTCACAAGTTGCAACAGCTGTTGCCCGAGATTCGTCGCAA
CAACAGGCACTCTGACAAGGTTTCAGCATCGAAGGTGTTGCAAGAGACATGCAACTACATTCGAAGTCTACATAGAGAAGTGGATGATCTGAGTGGCAATATCACCGTTT
ATAAGTCGAGTAATAAAATTGGTATAGATAATTCTGACCATTCCGAAATTCAAGAACTAAGCAAGACAGTGCAGCACTCAAGACACGATCGGGAGACGAATCCCGAAGGA
GAGGCAAAGCAAAGGGGTTGGCCCATGGTCAGCCTCGGCTCATGGTTGAGGCCGACCACTCGGTCCACTCGTGTGGGTCGAGTCTCTTCTCCTCCGCTTGGTCCCTATAG
TCCTCGATCGCCCCAATTCAACCTGGTTCAGTCCGGATCAGTCTGGAGATGCCTAGAAACCCTAAGGCAGGAAAAGGTATATAAACTCTTCTTTGTCACTGGGGATCCGA
AACTCTACTCCTTAACTCTCTCCTCTTACTCTTGCTCTCTTGCTTTTTTCATCTTACTTCTTACTGACTTAGGCATCGGAGGCGATGTGGTGCTGTGTGCAAATTTTCAT
TGTCTTGCAGGTCACGTCTTCCCCTCCTCAAACAAATTCACTGCGGGTGTTCAGGCTGAGTGGTTGGCCAAATTTGACAATCAACAAAAATCAAAAGTGCAAATACTCAA
CGTCATGAACGATCCAAAAATTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCAGATCTCGTTCGAGGCAATCAGCTGGTGTAAGAATCAGCGACGAGCAGATCACGGACCTCGTTCACAAGTTGCAACAGCTGTTGCCCGAGATTCGTCGCAA
CAACAGGCACTCTGACAAGGTTTCAGCATCGAAGGTGTTGCAAGAGACATGCAACTACATTCGAAGTCTACATAGAGAAGTGGATGATCTGAGTGGCAATATCACCGTTT
ATAAGTCGAGTAATAAAATTGGTATAGATAATTCTGACCATTCCGAAATTCAAGAACTAAGCAAGACAGTGCAGCACTCAAGACACGATCGGGAGACGAATCCCGAAGGA
GAGGCAAAGCAAAGGGGTTGGCCCATGGTCAGCCTCGGCTCATGGTTGAGGCCGACCACTCGGTCCACTCGTGTGGGTCGAGTCTCTTCTCCTCCGCTTGGTCCCTATAG
TCCTCGATCGCCCCAATTCAACCTGGTTCAGTCCGGATCAGTCTGGAGATGCCTAGAAACCCTAAGGCAGGAAAAGGTATATAAACTCTTCTTTGTCACTGGGGATCCGA
AACTCTACTCCTTAACTCTCTCCTCTTACTCTTGCTCTCTTGCTTTTTTCATCTTACTTCTTACTGACTTAGGCATCGGAGGCGATGTGGTGCTGTGTGCAAATTTTCAT
TGTCTTGCAGGTCACGTCTTCCCCTCCTCAAACAAATTCACTGCGGGTGTTCAGGCTGAGTGGTTGGCCAAATTTGACAATCAACAAAAATCAAAAGTGCAAATACTCAA
CGTCATGAACGATCCAAAAATTAATTGA
Protein sequenceShow/hide protein sequence
MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSASKVLQETCNYIRSLHREVDDLSGNITVYKSSNKIGIDNSDHSEIQELSKTVQHSRHDRETNPEG
EAKQRGWPMVSLGSWLRPTTRSTRVGRVSSPPLGPYSPRSPQFNLVQSGSVWRCLETLRQEKVYKLFFVTGDPKLYSLTLSSYSCSLAFFILLLTDLGIGGDVVLCANFH
CLAGHVFPSSNKFTAGVQAEWLAKFDNQQKSKVQILNVMNDPKIN