; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg036888 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036888
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold5:48148995..48151369
RNA-Seq ExpressionSpg036888
SyntenySpg036888
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137160.1 chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia]9.3e-13895.22Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        MAT MTQAS AVFRPCASR+RFLSGSS KFNRALSVKPT SS+P  FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

XP_022949090.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]1.2e-13794.42Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        M+ VM QAS AVFRP ASR+RFL GSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

XP_022998805.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima]1.6e-13794.42Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        M+ VM QAS AVFRP ASR+RFLSGSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNT++QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

XP_023524863.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.4e-13894.82Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        M+ VM QAS AVFRP ASR+RFLSGSS KFNRALSVKPTTSS+PSSFKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

XP_038894825.1 chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]8.4e-13994.82Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        MATVMTQAS +VFRPC  R+RFLS +S KFNR LSVKPTTSS+P+SFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

TrEMBL top hitse value%identityAlignment
A0A0A0LTE5 Chlorophyll a-b binding protein, chloroplastic2.9e-13793.2Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        MATV+TQAS  VFRPCASR+RFLSGSS KFNRALSVKPTTSSIP++FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENL+WY QAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T++GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLR
        +EKEIANGRLAMLAFLGFIVQHNVTGKGPFDNF+QHISDPWHNTI+QTLR
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLR

A0A2C9VP65 Chlorophyll a-b binding protein, chloroplastic1.1e-13188.84Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        MATV+TQAS AVFRPCASR+RFL+GSS K NR +S+KP  SS  +SFKVEAKKGEWLPGLPSPAYL+GSLPGDNGFDPLGLAEDPENLKWY+QAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFT  G+INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKE+ANGRLAMLAFLGF+VQHNVTGKGPFDN LQH+SDPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

A0A6J1C5V9 Chlorophyll a-b binding protein, chloroplastic4.5e-13895.22Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        MAT MTQAS AVFRPCASR+RFLSGSS KFNRALSVKPT SS+P  FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

A0A6J1GBT1 Chlorophyll a-b binding protein, chloroplastic5.9e-13894.42Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        M+ VM QAS AVFRP ASR+RFL GSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

A0A6J1KDI3 Chlorophyll a-b binding protein, chloroplastic7.7e-13894.42Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        M+ VM QAS AVFRP ASR+RFLSGSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNT++QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic1.9e-6149.36Show/hide
Query:  ASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFT
        A++  FL G   + ++ ++   + S   S+   +  +  W PG   P +LDGSLPGD GFDPLGL  DPE+LKW  QAELV+ RWAMLG AG+ +PE  T
Subjt:  ASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  SFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRL
          G++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E + KEI NGRL
Subjt:  SFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRL

Query:  AMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI
        AMLA +G   QH  TG GP DN   H++DP H TI
Subjt:  AMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI

P27521 Chlorophyll a-b binding protein 4, chloroplastic8.2e-12183.13Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSI-PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNG
        MATV T AS ++FRPC S+ RFL+GSS + NR LS     SS   SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVNG
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSI-PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGMLLPEVFT  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQT
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SDPWHNTI+QT
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQT

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)1.3e-8667.4Show/hide
Query:  KFNRALSVKPTTSSIPSSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK
        +F   +   P  S  P S + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDPE+L+W+VQA++VNGRWAMLGVAGML+PEV T  G++N P+
Subjt:  KFNRALSVKPTTSSIPSSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK

Query:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNV
        W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLAFLGF+VQHNV
Subjt:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNV

Query:  TGKGPFDNFLQHISDPWHNTIIQTLRG
         GKGPF+N  QH++DPWHNTIIQT+ G
Subjt:  TGKGPFDNFLQHISDPWHNTIIQTLRG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic9.4e-12584.46Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR
        MATV TQAS A+F PC  ++RFL GSS K NR ++ +P   S  +SFKVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENL+W+VQAELVNGR
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDN LQHISDPWHNTI+QTL G
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic3.3e-6150.63Show/hide
Query:  SRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEV
        S   FL G   +  + L+V P  S   +S +  A   +   W PG   P +LDGSLPGD GFDPLGL+ DP++LKW VQAE+V+ RWAMLG AG+ +PE 
Subjt:  SRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEV

Query:  FTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANG
         T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +         E + KEI NG
Subjt:  FTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANG

Query:  RLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI
        RLAMLA +G   QH  TG GP DN   H++DP H TI
Subjt:  RLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 68.0e-5550.26Show/hide
Query:  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR
        W PG   P +LDGSLPGD GFDPLGL  DP+ LKW+ QAEL++ RWAML V G+++PE     G I    WYDAG  EYFA S+TLFV + +L  + E R
Subjt:  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR

Query:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWH
        RW D+  PGSV+ +P +     P  DVGYPGG++           EP +  + KEI NGRLAMLAFLGF  Q   T + P +N + H++DP H
Subjt:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWH

AT1G45474.1 photosystem I light harvesting complex gene 54.5e-5850.21Show/hide
Query:  SSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK
        SS    R  SVK     I  +  VE  +  WLPGL  P YLDG+L GD GFDPLGL EDPE+LKWYVQAELV+ R+AMLGVAG+L  ++  + GI N+P 
Subjt:  SSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFL

Query:  GFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTL
        GF VQ +VT  GP DN ++H+S+PWH TIIQTL
Subjt:  GFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTL

AT1G45474.2 photosystem I light harvesting complex gene 54.5e-5850.21Show/hide
Query:  SSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK
        SS    R  SVK     I  +  VE  +  WLPGL  P YLDG+L GD GFDPLGL EDPE+LKWYVQAELV+ R+AMLGVAG+L  ++  + GI N+P 
Subjt:  SSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFL

Query:  GFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTL
        GF VQ +VT  GP DN ++H+S+PWH TIIQTL
Subjt:  GFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A45.8e-12283.13Show/hide
Query:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSI-PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNG
        MATV T AS ++FRPC S+ RFL+GSS + NR LS     SS   SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVNG
Subjt:  MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSI-PSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGMLLPEVFT  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQT
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SDPWHNTI+QT
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQT

AT3G61470.1 photosystem I light harvesting complex gene 22.3e-6250.63Show/hide
Query:  SRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEV
        S   FL G   +  + L+V P  S   +S +  A   +   W PG   P +LDGSLPGD GFDPLGL+ DP++LKW VQAE+V+ RWAMLG AG+ +PE 
Subjt:  SRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEV

Query:  FTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANG
         T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +         E + KEI NG
Subjt:  FTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANG

Query:  RLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI
        RLAMLA +G   QH  TG GP DN   H++DP H TI
Subjt:  RLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGTCATGACACAGGCTTCAGTCGCCGTCTTTAGGCCATGCGCGTCAAGAACGAGGTTCCTTTCGGGTTCGTCGGAAAAGTTTAACAGAGCTTTGTCTGTTAA
GCCAACAACTTCTTCAATTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTTCCAGGTGATA
ACGGATTTGATCCTCTAGGACTTGCAGAGGACCCTGAGAACTTGAAGTGGTATGTGCAAGCAGAGCTTGTGAATGGTCGGTGGGCGATGCTCGGAGTTGCAGGTATGCTA
TTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCATCGTCAACTCTCTTTGTGATCGAGTTCAT
TCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAACAATACAGCTTGCCACCAAATGATGTTGGAT
ATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTT
CAACACAATGTGACAGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACCATTATCCAAACACTAAGGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGTCATGACACAGGCTTCAGTCGCCGTCTTTAGGCCATGCGCGTCAAGAACGAGGTTCCTTTCGGGTTCGTCGGAAAAGTTTAACAGAGCTTTGTCTGTTAA
GCCAACAACTTCTTCAATTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTTCCAGGTGATA
ACGGATTTGATCCTCTAGGACTTGCAGAGGACCCTGAGAACTTGAAGTGGTATGTGCAAGCAGAGCTTGTGAATGGTCGGTGGGCGATGCTCGGAGTTGCAGGTATGCTA
TTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCATCGTCAACTCTCTTTGTGATCGAGTTCAT
TCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAACAATACAGCTTGCCACCAAATGATGTTGGAT
ATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTT
CAACACAATGTGACAGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACCATTATCCAAACACTAAGGGGATAA
Protein sequenceShow/hide protein sequence
MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGML
LPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIV
QHNVTGKGPFDNFLQHISDPWHNTIIQTLRG