CuGenDBv2

Gene ID	Spg036939
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	scaffold5:46558740..46561435
RNA-Seq Expression	Spg036939
Synteny	Spg036939
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584313.1 hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-77

92.64

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKTT APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAF+GNAVDLEGVV+ADQQRNGR+LFADGRVLPPAQT+E+ SAAGALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

TYJ99038.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]

2.2e-80

76.96

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Query:  CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGG
        CGGVSF +LYLLDSLT SASL                                 STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   
Subjt:  CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGG

Query:  GGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGA
        GGGSRKSKK KRKTTTAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GA
Subjt:  GGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGA

Query:  LCRFSVSLTGICSGGAG
        LCRFSVSLTGICSGGAG
Subjt:  LCRFSVSLTGICSGGAG

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]

1.8e-77

93.25

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKTT APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAF+GNAVDLEGVV+ADQQRNGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

3.9e-77

92.64

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AA AAA   GGGSRKSKKPKRKTT APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAF+GNAVDLEGVV+ADQQRNGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

XP_038895169.1 uncharacterized protein At3g17950 [Benincasa hispida]

7.4e-76

91.41

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA AAA   GGGSRKSKK KRKT+TAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAFYGNAVDLEGVVA DQQRNGR+LFADGRVLPPA+TE++ SAAGALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQI1 DDE Tnp4 domain-containing protein

2.7e-79

76.04

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Query:  CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGG
        CGGVSF +LYLLDSLT SASL                                 STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   
Subjt:  CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGG

Query:  GGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGA
        GGGSRKSKK KRKTT APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVVAADQQRNGR+LFADGRVLPPAQTEE+ S A  
Subjt:  GGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGA

Query:  LCRFSVSLTGICSGGAG
        LCRFSVSLTGICSGGAG
Subjt:  LCRFSVSLTGICSGGAG

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

6.1e-76

91.41

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAFYGNAVDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

6.1e-76

91.41

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAFYGNAVDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

A0A5D3BLI7 Putative nuclease HARBI1

1.1e-80

76.96

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Query:  CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGG
        CGGVSF +LYLLDSLT SASL                                 STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   
Subjt:  CGGVSFGLLYLLDSLTCSASL---------------------------------STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGG

Query:  GGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGA
        GGGSRKSKK KRKTTTAPALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGNAVDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GA
Subjt:  GGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGA

Query:  LCRFSVSLTGICSGGAG
        LCRFSVSLTGICSGGAG
Subjt:  LCRFSVSLTGICSGGAG

A0A6J1E8Y2 uncharacterized protein At3g17950

8.5e-78

93.25

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Query:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD
        STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKTT APALVADRKRRWWRLCRDDGVKPASLG+FLEVERRFGD
Subjt:  STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGDFLEVERRFGD

Query:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        GAF+GNAVDLEGVV+ADQQRNGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  GAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

1.9e-29

47.37

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Query:  STGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------
        STGSFFHDRS +LGTLMG SF A   + FR  S+     + A + A+     +R++ + KR  + +      R+R+WWR CRDD       G+       
Subjt:  STGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------

Query:  KPASLGDFLEVERRFGDGAFYGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG
        K +SLG++LEVERRFGD A Y +A  +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGICSGG G
Subjt:  KPASLGDFLEVERRFGDGAFYGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

1.3e-30

47.37

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Query:  STGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------
        STGSFFHDRS +LGTLMG SF A   + FR  S+     + A + A+     +R++ + KR  + +      R+R+WWR CRDD       G+       
Subjt:  STGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------

Query:  KPASLGDFLEVERRFGDGAFYGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG
        K +SLG++LEVERRFGD A Y +A  +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGICSGG G
Subjt:  KPASLGDFLEVERRFGDGAFYGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG

AT3G17950.2 unknown protein

2.3e-22

43.68

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Query:  MGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFG
        MG SF A   + FR  S+     + A + A+     +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLG++LEVERRFG
Subjt:  MGVSFPA---ITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFG

Query:  DGAFYGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG
        D A Y +A  +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGICSGG G
Subjt:  DGAFYGNA-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG

Sequences

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CDS sequence

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TGTGGGGGAGTGAGCTTTGGGCTTTTGTATTTATTGGATTCTCTGACTTGCTCTGCTTCATTGTCTACAGGTTCGTTCTTCCATGACAGGAGCACGAGCTTGGGGACTCT
AATGGGGGTGAGCTTCCCGGCGATTACCTTCCGAGTGCCCTCACAGAACCGAGACCAACACGCCGCCGCGAACGCCGCCGCCGCAGGCGGCGGGGGCGGTTCCCGGAAGA
GCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGGCACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGATGGCGTTAAGCCGGCATCTCTCGGT
GATTTTCTCGAGGTGGAACGGAGATTTGGGGACGGTGCTTTTTATGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGGCGGAATTTGTT
CGCCGACGGGAGAGTTCTTCCGCCGGCGCAAACGGAGGAAGAAGCGTCGGCGGCGGGGGCTCTATGCCGATTTTCCGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCG
GCTAA

mRNA sequence

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Protein sequence

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CGGVSFGLLYLLDSLTCSASLSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAGGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDGVKPASLG
DFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

Spg036939 (gene) of Sponge gourd (cylindrica) v1 genome