| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0058280.1 uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa] | 1.4e-27 | 53.53 | Show/hide |
Query: TTSTGFSSKVGGSLVFSDVLSILGCTS-----------RIRS-----SIWPRGNRSSLQTGELDKT---------------VEIEVPVPDTLPTSAESSR
T STGFSSK GG LVFSD LSIL RI + S PRGNR SLQT ELDKT V IE+PVPD LPTSAESS
Subjt: TTSTGFSSKVGGSLVFSDVLSILGCTS-----------RIRS-----SIWPRGNRSSLQTGELDKT---------------VEIEVPVPDTLPTSAESSR
Query: SSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
S+SSTW FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: SSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.4e-27 | 50.29 | Show/hide |
Query: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
++ T TGFSSK+GG LVFSD LSIL +S W RGNRSSLQ+GELD T VEIE+PVPDTLPTS
Subjt: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
Query: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
AESS S+SSTW F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa] | 3.9e-30 | 57.05 | Show/hide |
Query: TTSTGFSSKVGGSLVFSDVLSILGCTSRIRSSIW--PRGNRSSLQTGELDKTV---------------EIEVPVPDTLPTSAESSRSSSSTW--------
T STGFSSK GG LV SD LSIL ++ ++ PRGNR SLQTGELDKTV IE+PVPDTLPTSAESS S+SSTW
Subjt: TTSTGFSSKVGGSLVFSDVLSILGCTSRIRSSIW--PRGNRSSLQTGELDKTV---------------EIEVPVPDTLPTSAESSRSSSSTW--------
Query: -------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: -------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-26 | 51.85 | Show/hide |
Query: STGFSSKVGGSLVFSDVLSIL---GCTSRIRSSI---WPRGNRSSLQTGELDK-----------------TVEIEVPVPDTLPTSAESSRSSSSTWFNV-
STGFSSK GG LVFSD LSI ++ I WPRGNR LQTGELDK VEIE+P+PDTLPTSAESS S+SSTW +
Subjt: STGFSSKVGGSLVFSDVLSIL---GCTSRIRSSI---WPRGNRSSLQTGELDK-----------------TVEIEVPVPDTLPTSAESSRSSSSTWFNV-
Query: --SV---------------------GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTRVQLS
SV GS GIVRGDDVCWLHA+FRAK AGGPGGGVT +S
Subjt: --SV---------------------GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTRVQLS
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-27 | 50.29 | Show/hide |
Query: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
++ T TGFSSK+GG LVFSD LSIL +S W RGNRSSLQ+GELD T VEIE+PVPDTLPTS
Subjt: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
Query: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
AESS S+SSTW F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 7.4e-27 | 51.85 | Show/hide |
Query: STGFSSKVGGSLVFSDVLSIL---GCTSRIRSSI---WPRGNRSSLQTGELDK-----------------TVEIEVPVPDTLPTSAESSRSSSSTWFNV-
STGFSSK GG LVFSD LSI ++ I WPRGNR LQTGELDK VEIE+P+PDTLPTSAESS S+SSTW +
Subjt: STGFSSKVGGSLVFSDVLSIL---GCTSRIRSSI---WPRGNRSSLQTGELDK-----------------TVEIEVPVPDTLPTSAESSRSSSSTWFNV-
Query: --SV---------------------GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTRVQLS
SV GS GIVRGDDVCWLHA+FRAK AGGPGGGVT +S
Subjt: --SV---------------------GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTRVQLS
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| A0A5A7UT17 CCHC-type domain-containing protein | 6.7e-28 | 53.53 | Show/hide |
Query: TTSTGFSSKVGGSLVFSDVLSILGCTS-----------RIRS-----SIWPRGNRSSLQTGELDKT---------------VEIEVPVPDTLPTSAESSR
T STGFSSK GG LVFSD LSIL RI + S PRGNR SLQT ELDKT V IE+PVPD LPTSAESS
Subjt: TTSTGFSSKVGGSLVFSDVLSILGCTS-----------RIRS-----SIWPRGNRSSLQTGELDKT---------------VEIEVPVPDTLPTSAESSR
Query: SSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
S+SSTW FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: SSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| A0A5A7V9N3 Reverse transcriptase | 1.1e-27 | 50.29 | Show/hide |
Query: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
++ T TGFSSK+GG LVFSD LSIL +S W RGNRSSLQ+GELD T VEIE+PVPDTLPTS
Subjt: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
Query: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
AESS S+SSTW F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| A0A5D3CJX3 CCHC-type domain-containing protein | 1.9e-30 | 57.05 | Show/hide |
Query: TTSTGFSSKVGGSLVFSDVLSILGCTSRIRSSIW--PRGNRSSLQTGELDKTV---------------EIEVPVPDTLPTSAESSRSSSSTW--------
T STGFSSK GG LV SD LSIL ++ ++ PRGNR SLQTGELDKTV IE+PVPDTLPTSAESS S+SSTW
Subjt: TTSTGFSSKVGGSLVFSDVLSILGCTSRIRSSIW--PRGNRSSLQTGELDKTV---------------EIEVPVPDTLPTSAESSRSSSSTW--------
Query: -------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: -------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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| A0A5D3DSY7 Putative Retrotransposon protein | 1.1e-27 | 50.29 | Show/hide |
Query: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
++ T TGFSSK+GG LVFSD LSIL +S W RGNRSSLQ+GELD T VEIE+PVPDTLPTS
Subjt: DISETTTTSTGFSSKVGGSLVFSDVLSILGC----------TSRIRSSIWP---RGNRSSLQTGELDKT-----------------VEIEVPVPDTLPTS
Query: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
AESS S+SSTW F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGGVTT
Subjt: AESSRSSSSTW---------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
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